Propagation of TnrA regulog to Geobacillus sp. Y412MC61

Reference regulog properties
Source regulog:	TnrA - Bacillales
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor (activator)
Biological process:	Nitrogen assimilation
Effector:	NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum:	Firmicutes
Propagated regulon:
Target genome	Geobacillus sp. Y412MC61
Orthologous TF(s)	GYMC61_2671
Regulated genes	20

Built upon 304 sites [see more]

Predicted regulatory interactions in *Geobacillus sp. Y412MC61*
	Locus tag	Position	Score	Sequence
Position: -100 Score: 4.2 Sequence: GGTTAGAAAATTTTACG Locus tag: GYMC61_1030
	GYMC61_1030	-100	4.2	GGTTAGAAAATTTTACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqzL
Ortholog function: Hypothetical protein
Geobacillus kaustophilus HTA426	GK2487	-100	4.2	GGTTAGAAAATTTTACG

Position: -133 Score: 4.8 Sequence: TGTTAGAAAACTTAACA Position: -57 Score: 5.4 Sequence: TGTTATATATTATGACA Locus tag: GYMC61_2248
	GYMC61_2248	-133	4.8	TGTTAGAAAACTTAACA
		-57	5.4	TGTTATATATTATGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: Ammonium transporter
Anoxybacillus flavithermus WK1	Aflv_1332	-112	4.6	TGTCATGAAAAATAACA
		-49	4.8	TGTAATATATTATAACC
		-27	5	TGTTATAAAAAATGACA
Geobacillus kaustophilus HTA426	GK1452	-124	4.4	TGTTAAGAAATTTAACA
		-48	5.4	TGTTATATATTATGACA
Bacillus halodurans C-125	BH3834	-138	4	TGTCAGATATAGGCACA
		-113	4.9	TGTCTGATTATCTGACA
		-41	4.3	TATTAGAAAAACTTACA
Bacillus clausii KSM-K16	ABC3928	-84	5.2	TGTTAGATATCCTGACA
Paenibacillus sp. JDR-2	Pjdr2_2141	-159	4.2	TGTGAAAAAACTTAACA
		-34	4.5	TGTTAGTAAACATCACA

Position: -16 Score: 4.9 Sequence: TGTGAGGTAATGTAACA Locus tag: GYMC61_2480
	GYMC61_2480	-16	4.9	TGTGAGGTAATGTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA2
Ortholog function: Glutamine synthetase type I (EC 6.3.1.2)
Anoxybacillus flavithermus WK1	Aflv_1403	-16	4.9	TGTGAGGTAATGTAACA
Geobacillus kaustophilus HTA426	GK1637	-16	4.9	TGTGAGGTAATGTGACA
Bacillus halodurans C-125	BH3867	-103	5.7	TGTCAGATAATCTAACA
		-33	4.9	TGTCACATTACATTACA
Bacillus clausii KSM-K16	ABC3940	-103	5.7	TGTCAGATAATCTGACA

Position: -286 Score: 4.6 Sequence: TGTGATAAAAAGTTACA Position: -202 Score: 5.2 Sequence: TGTTATATAAACTGACA Locus tag: GYMC61_2678
	GYMC61_2678	-286	4.6	TGTGATAAAAAGTTACA
		-202	5.2	TGTTATATAAACTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nasD
Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Bacillus subtilis subsp. subtilis str. 168	BSU03300	-95	4.1	TCGTATATTTTGTTACA
		-85	5.3	TGTTACATTTTATAACA
Bacillus amyloliquefaciens FZB42	RBAM_003510	-84	4.9	TGTTACATTTCATAACA
Bacillus licheniformis DSM 13	BLi00484	-87	5	TGTCAGGAAATGTAACA
Geobacillus kaustophilus HTA426	GK1868	-286	4.6	TGTGATAAAAAGTTACA
		-202	5.2	TGTTATATAAACTGACA
Bacillus halodurans C-125	BH0613	-80	4.6	TGTAAGATATCCTCCCA
Bacillus clausii KSM-K16	ABC1621	-89	5.2	TGTCACAAAATATTACA

Position: -224 Score: 4.3 Sequence: TGATAATAAATATAACA Position: -201 Score: 5.3 Sequence: TGTAATAAAATATGACA Locus tag: GYMC61_2778
	GYMC61_2778	-224	4.3	TGATAATAAATATAACA
		-201	5.3	TGTAATAAAATATGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: urtA
Ortholog function: Urea ABC transporter, urea binding protein
Geobacillus kaustophilus HTA426	GK1937	-224	4.3	TGATAATAAATATAACA
		-201	5.2	TGTAATAAAATGTGACA
Bacillus halodurans C-125	BH0251	-192	4.5	TGTTATCTTTGATGACA
		-157	5	TGTTAGAAAAGATTACA
		-88	4.4	TGTAACGATTTCTAACG
Paenibacillus sp. JDR-2	Pjdr2_0557	-286	4.2	TCTTATATTTTCTTTCA
		-113	3.9	TGTCATGTATATTGACG

Position: -38 Score: 3.5 Sequence: TGAATTATTATATTAAA Locus tag: GYMC61_2849
	GYMC61_2849	-38	3.5	TGAATTATTATATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yclF
Ortholog function: Di-tripeptide-proton ABC symporter
Bacillus subtilis subsp. subtilis str. 168	BSU03670	-212	3.6	TCTAAAATTTTATTAAA
		-175	4.9	TGTAAGAAAATCTCACG
Bacillus amyloliquefaciens FZB42	RBAM_003840	-211	3.4	CTTTAAATTTTATTAAA
		-174	4.9	AGTCAGATAATATAACA
Bacillus pumilus SAFR-032	BPUM_0343	-183	3.8	TTAAATAAATTCTTTCA
		-141	3.7	TGAAAGAATTTTTCATA
Bacillus licheniformis DSM 13	BLi00449	-180	3.9	TATTAAAAAATCTTTCA
Geobacillus kaustophilus HTA426	GK2020	-44	3.5	TGAATTATTATATTAAA

Position: -177 Score: 4.9 Sequence: TGTAAGAAATTATGACG Locus tag: GYMC61_2871
	GYMC61_2871	-177	4.9	TGTAAGAAATTATGACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: Dihydroxy-acid dehydratase (EC 4.2.1.9)
Bacillus pumilus SAFR-032	BPUM_1922	-162	5	GGTCAGATTTTATGACA
Bacillus licheniformis DSM 13	BLi02324	-248	4.5	TGTAATAAAATATCACT
Anoxybacillus flavithermus WK1	Aflv_1238	-19	4.1	TGTCATTTTATTTTAAA
		1	4.3	TGTTACAATGTTTAACA
Geobacillus kaustophilus HTA426	GK2046	-177	4.9	TGTAAGAAATTATGACG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of TnrA regulog to Geobacillus sp. Y412MC61

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --