Propagation of CymR regulog to Bacillus licheniformis DSM 13
| Source regulog: | CymR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Cysteine metabolism |
| Effector: | O-acetyl-L-serine; CysK, cysteine synthetase |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi02877 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -38
Score: 5.6 Sequence: TAATCCCAATAAAATTACTCGGAAATT
Locus tag: BLi00089
|
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| BLi00089 | -38 | 5.6 | TAATCCCAATAAAATTACTCGGAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysK | ||||
| Ortholog function: Cysteine synthase (EC 2.5.1.47) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU00730 | -39 | 5.4 | TAATACCAATACAAATAGTCGGAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_000840 | -39 | 5.8 | TAATACCAATAAATTTAGTCGGAAATT |
| Bacillus pumilus SAFR-032 | BPUM_0057 | -40 | 4.6 | TtAaTaCaATaAAATTAcTcGGAgaTA |
| Bacillus licheniformis DSM 13 | BLi00089 | -38 | 5.6 | TAATCCCAATAAAATTACTCGGAAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0065 | -30 | 5 | CAAATTCTATAAAAATACTCGGGATTA |
| Geobacillus kaustophilus HTA426 | GK0065 | -38 | 4.7 | CAAAGTCGATAAAATTAATGGGGATTA |
| Bacillus cereus ATCC 14579 | BC0075 | -39 | 5.3 | TAAAACCAATAAAAATACTCGGTGTTA |
| Bacillus halodurans C-125 | BH0088 | -39 | 5.2 | GAAAACCAATAAATTTACTTGGGATTA |
| Bacillus clausii KSM-K16 | ABC0109 | -42 | 4.9 | TAAAACCAATGAAGATACTAGGGATTG |
| Oceanobacillus iheyensis HTE831 | OB0084 | -41 | 6 | TAAATCTTATAAAAATACTTGGAATTA |
| Paenibacillus sp. JDR-2 | Pjdr2_0074 | -44 | 5.7 | AAAAACCAACTAAATTAGTCGGAATAA |
|
Position: -45
Score: 5.9 Sequence: TAATACTTATTAAATCTATCGGAATTT
Locus tag: BLi00540
|
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| BLi00540 | -45 | 5.9 | TAATACTTATTAAATCTATCGGAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydbM | ||||
| Ortholog function: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU04520 | -45 | 6.4 | TAATACATATTAAATTTATCGGAATTA |
| Bacillus amyloliquefaciens FZB42 | RBAM_004850 | -82 | 6 | TAATACTTATTAACTTTATCGGAATTA |
| Bacillus pumilus SAFR-032 | BPUM_2341 | -89 | 5.5 | TAAATCCTATAAGTAAAGTGTGTTTTA |
| -61 | 4.9 | TTATTCCGATTGGAAAAATCAGATATG | ||
| Bacillus licheniformis DSM 13 | BLi00540 | -45 | 5.9 | TAATACTTATTAAATCTATCGGAATTT |
| Oceanobacillus iheyensis HTE831 | OB0293 | -45 | 5.5 | TTATACCTATTGACTTACTAGGCATTA |
|
Position: -77
Score: 5.1 Sequence: TAATTCCTACTTGACCAATCAGGTTTG
Locus tag: BLi00975
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| BLi00975 | -77 | 5.1 | TAATTCCTACTTGACCAATCAGGTTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhcL | ||||
| Ortholog function: Sodium-cystine symporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU09130 | -73 | 5.2 | TAATTCGCACTTGACCCATCGGAATTA |
| Bacillus licheniformis DSM 13 | BLi00975 | -77 | 5.1 | TAATTCCTACTTGACCAATCAGGTTTG |
| Bacillus cereus ATCC 14579 | BC4242 | -72 | 5.5 | AATTTCATAGTTGACTTATAGGTTTTA |
| -39 | 4.8 | TATATTCTATATAACAGATTGGAATTA | ||
| Bacillus clausii KSM-K16 | ABC2897 | -78 | 5.2 | TAATTCCCACTTGACTCATATGATTAT |
| Oceanobacillus iheyensis HTE831 | OB2714 | -56 | 6.2 | TAATTCGTAGTAAATTAATTGGAATTA |
| Paenibacillus sp. JDR-2 | Pjdr2_6037 | -148 | 5.1 | AATTCCCCATAGAAATAGTCGGATTTA |
| -41 | 5 | TAATTCCAATCAAACAACTTGGATTAG | ||
|
Position: -242
Score: 5.5 Sequence: CTATTCCTATAAATCAAATCGGTTTTA
Locus tag: BLi01300
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| BLi01300 | -242 | 5.5 | CTATTCCTATAAATCAAATCGGTTTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysL | ||||
| Ortholog function: Regulator of sulfur assimilation, activates cysJI expression | ||||
| Bacillus licheniformis DSM 13 | BLi01300 | -242 | 5.5 | CTATTCCTATAAATCAAATCGGTTTTA |
| Anoxybacillus flavithermus WK1 | Aflv_1598 | -112 | 5.4 | CTATTCCTATAAATCAAGTATGTTTTA |
|
Position: -105
Score: 5.5 Sequence: TAAAACCGATTTGATTTATAGGAATAG
Locus tag: BLi01302
|
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| BLi01302 | -105 | 5.5 | TAAAACCGATTTGATTTATAGGAATAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysJ | ||||
| Ortholog function: Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) | ||||
| Bacillus licheniformis DSM 13 | BLi01302 | -105 | 5.5 | TAAAACCGATTTGATTTATAGGAATAG |
| Anoxybacillus flavithermus WK1 | Aflv_1597 | -48 | 5.4 | TAAAACATACTTGATTTATAGGAATAG |
| Bacillus halodurans C-125 | BH0609 | -87 | 5.7 | TAAAACCAATTTGACTTATCGGAATAA |
| Bacillus clausii KSM-K16 | ABC0618 | -265 | 4.9 | AAATACCGAGTTTGTTAATCAGGATAA |
| Oceanobacillus iheyensis HTE831 | OB1653 | -98 | 5.4 | CAATTCACATTGTATTACTATGAATTA |
|
Position: -54
Score: 5.8 Sequence: TAAATCATACTATACTTATAGGAATTG
Locus tag: BLi02856
|
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| BLi02856 | -54 | 5.8 | TAAATCATACTATACTTATAGGAATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yrrT | ||||
| Ortholog function: SAM-dependent methyltransferase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU27280 | -49 | 6.1 | TAATCCATAGTATACTTATAGGAATTA |
| Bacillus amyloliquefaciens FZB42 | RBAM_024380 | -49 | 5.9 | TAATCCATACTATACTCATAGGAATTA |
| Bacillus pumilus SAFR-032 | BPUM_2363 | -51 | 5.4 | TAAAACATACTATACGCATAGGAATAA |
| Bacillus licheniformis DSM 13 | BLi02856 | -54 | 5.8 | TAAATCATACTATACTTATAGGAATTG |
| Anoxybacillus flavithermus WK1 | Aflv_0758 | -36 | 6.4 | TAATTCATACTATACTTATAGGAATTA |
| Geobacillus kaustophilus HTA426 | GK2543 | -51 | 5.9 | AAAAACATACTATATTTATAGGAATTA |
| Bacillus cereus ATCC 14579 | BC4369 | -29 | 5.1 | TAAAACCGATAAGAAAAAGGGGAATTT |
| Paenibacillus sp. JDR-2 | Pjdr2_5106 | -105 | 5.2 | TAAATCCGATTAATAAGGTTGGAAAAA |