Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ydbM gene

Properties
Regulog: CymR - Bacillales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Cysteine metabolism
Effector: O-acetyl-L-serine; CysK, cysteine synthetase
Phylum: Firmicutes
Built upon 65 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus amyloliquefaciens FZB42
Position: -82
Score: 6.00118
Sequence: TAATACTTATTAACTTTATCGGAATTA
Locus tag: RBAM_004850
Name: ydbM
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
ydbM -82 6 TAATACTTATTAACTTTATCGGAATTA RBAM_004850
Bacillus licheniformis DSM 13
Position: -45
Score: 5.86902
Sequence: TAATACTTATTAAATCTATCGGAATTT
Locus tag: BLi00540
Name: ydbM
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
ydbM -45 5.9 TAATACTTATTAAATCTATCGGAATTT BLi00540
Bacillus pumilus SAFR-032
Position: -89
Score: 5.50323
Sequence: TAAATCCTATAAGTAAAGTGTGTTTTA
Position: -61
Score: 4.86834
Sequence: TTATTCCGATTGGAAAAATCAGATATG
Locus tag: BPUM_2341
Name: ydbM
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
ydbM -89 5.5 TAAATCCTATAAGTAAAGTGTGTTTTA BPUM_2341
-61 4.9 TTATTCCGATTGGAAAAATCAGATATG
Bacillus subtilis subsp. subtilis str. 168
Position: -45
Score: 6.36733
Sequence: TAATACATATTAAATTTATCGGAATTA
Locus tag: BSU04520
Name: ydbM
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
ydbM -45 6.4 TAATACATATTAAATTTATCGGAATTA BSU04520
Oceanobacillus iheyensis HTE831
Position: -45
Score: 5.49706
Sequence: TTATACCTATTGACTTACTAGGCATTA
Locus tag: OB0293
Name: ydbM
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
ydbM -45 5.5 TTATACCTATTGACTTACTAGGCATTA OB0293