Propagation of Zur regulog to Bacillus licheniformis DSM 13
| Source regulog: | Zur - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi02686 |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -120
Score: 5.9 Sequence: CTAAACGAAATCATTTCGATTTA
Position: -44
Score: 6 Sequence: TAAATAGGAACTATTTCGATTTA
Locus tag: BLi00762
|
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| BLi00762 | -120 | 5.9 | CTAAACGAAATCATTTCGATTTA | |
| -44 | 6 | TAAATAGGAACTATTTCGATTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: folE2 | ||||
| Ortholog function: GTP cyclohydrolase I (EC 3.5.4.16) type 2 | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03340 | -44 | 6.7 | TAAATAGTAATTATTACGATTTG |
| Bacillus licheniformis DSM 13 | BLi00762 | -120 | 5.9 | CTAAACGAAATCATTTCGATTTA |
| -44 | 6 | TAAATAGGAACTATTTCGATTTA | ||
| Bacillus halodurans C-125 | BH0998 | -41 | 6.2 | TAAATCGTAATTATTCTTATTTA |
|
Position: -46
Score: 7 Sequence: TAAATCGTAATAATTACGATTTG
Locus tag: BLi00765
|
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| BLi00765 | -46 | 7 | TAAATCGTAATAATTACGATTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yciC | ||||
| Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03360 | -37 | 5.8 | TAAATCGTAATCATTCTATTTTA |
| Bacillus amyloliquefaciens FZB42 | RBAM_003550 | -103 | 6.6 | TAAATAGTAACGATTACGATTTA |
| -38 | 5.7 | TAAATCGTAATCATTCTATTTTG | ||
| Bacillus pumilus SAFR-032 | BPUM_3311 | -69 | 6.6 | CAAATCGTAATCATTACTTTTTA |
| Bacillus licheniformis DSM 13 | BLi00765 | -46 | 7 | TAAATCGTAATAATTACGATTTG |
| Bacillus clausii KSM-K16 | ABC4020 | -40 | 6.9 | TAATTCGTAATCATTACGATTTA |
| Oceanobacillus iheyensis HTE831 | OB3429 | -82 | 6.3 | TTAATCGTAATGATTACGTTTTT |
| Paenibacillus sp. JDR-2 | Pjdr2_3068 | -162 | 5.6 | TTAATCGTAATGTTGACGATTAA |
| -118 | 5.2 | TTATACGTAATTATTACGTTCAA | ||
| -67 | 5.8 | CTAATCGTAATAGTTACGAAATA | ||
| -35 | 5.1 | TTAATAGTAATGATTACGGAAAA | ||
| Paenibacillus sp. JDR-2 | Pjdr2_3068 | -162 | 5.6 | TTAATCGTAATGTTGACGATTAA |
| -118 | 5.2 | TTATACGTAATTATTACGTTCAA | ||
| -67 | 5.8 | CTAATCGTAATAGTTACGAAATA | ||
| -35 | 5.1 | TTAATAGTAATGATTACGGAAAA | ||
|
Position: -44
Score: 6.7 Sequence: TAAATCGTAATCATTACGCTTTG
Locus tag: BLi00952
|
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| BLi00952 | -44 | 6.7 | TAAATCGTAATCATTACGCTTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpsN2 | ||||
| Ortholog function: 30S ribosomal protein S14 | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU08880 | -40 | 6.6 | TAAATCGTAACAATTTCGATTTA |
| Bacillus amyloliquefaciens FZB42 | RBAM_009150 | -37 | 6.7 | CAAAACGTAATTATTACGATTTG |
| Bacillus pumilus SAFR-032 | BPUM_3312 | -69 | 6.6 | CAAATCGTAATCATTACTTTTTA |
| Bacillus licheniformis DSM 13 | BLi00952 | -44 | 6.7 | TAAATCGTAATCATTACGCTTTG |
| Bacillus clausii KSM-K16 | ABC4019 | -45 | 6.1 | TAAATCGTAATAATAATGATTTT |
| Oceanobacillus iheyensis HTE831 | OB3432 | -247 | 6 | TTAATCGTAATCGTTACGATGTA |
|
Position: -245
Score: 6.7 Sequence: CAAATCGTAATAATTACGTTTTG
Locus tag: BLi01934
|
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| BLi01934 | -245 | 6.7 | CAAATCGTAATAATTACGTTTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH0367 | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase 51 kDa subunit | ||||
| Bacillus licheniformis DSM 13 | BLi01934 | -245 | 6.7 | CAAATCGTAATAATTACGTTTTG |
| -41 | 5.9 | CAAATCGGAATAATTCTGTTTTA | ||
| Bacillus halodurans C-125 | BH0367 | -40 | 6.6 | TAAATAGGAATTATTACGATTTA |
|
Position: -98
Score: 6.8 Sequence: TAAATCGTAATTATTATGATTTA
Locus tag: BLi01970
|
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| BLi01970 | -98 | 6.8 | TAAATCGTAATTATTATGATTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufE2 | ||||
| Ortholog function: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 | ||||
| Bacillus licheniformis DSM 13 | BLi01970 | -98 | 6.8 | TAAATCGTAATTATTATGATTTA |
| Bacillus halodurans C-125 | BH0369 | -40 | 6.6 | TAAATAGGAATTATTACGATTTA |
|
Position: -37
Score: 6.6 Sequence: TAAAGCGTAATGATTACGTTTTA
Locus tag: BLi02553
|
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| BLi02553 | -37 | 6.6 | TAAAGCGTAATGATTACGTTTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpmGA1 | ||||
| Ortholog function: 50S ribosomal protein L33 | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_022140 | -40 | 6.8 | TAAAACGTAATAATTACGATTTG |
| Bacillus pumilus SAFR-032 | BPUM_3310 | -42 | 6.5 | CAAATCGTAACCATTACGAATTA |
| Bacillus licheniformis DSM 13 | BLi02553 | -37 | 6.6 | TAAAGCGTAATGATTACGTTTTA |
| Anoxybacillus flavithermus WK1 | Aflv_1438 | -45 | 6.3 | CAAAACGTAATGATTACTATTTT |
| Bacillus cereus ATCC 14579 | BC4339 | -55 | 7 | TAAATCGTAATCATTACGTTTTA |
|
Position: -111
Score: 6.2 Sequence: TAAAACGTAATTGTTTCGATTTG
Locus tag: BLi03211
|
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| BLi03211 | -111 | 6.2 | TAAAACGTAATTGTTTCGATTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytiB | ||||
| Ortholog function: Carbonic anhydrase (EC 4.2.1.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU30690 | -39 | 7 | TAAAACGTAATTATTACGATTTA |
| Bacillus amyloliquefaciens FZB42 | RBAM_027700 | -39 | 6.8 | TAAAACGTAATTATTACGATTTG |
| Bacillus pumilus SAFR-032 | BPUM_2707 | -188 | 6.1 | TAGATAGAAATGATTACGATTTA |
| -151 | 6.5 | TGTATCGTAATAATTACGATTTG | ||
| Bacillus licheniformis DSM 13 | BLi03211 | -111 | 6.2 | TAAAACGTAATTGTTTCGATTTG |
|
Position: -38
Score: 6.2 Sequence: CAAATCGAAACAATTACGTTTTA
Locus tag: BLi03212
|
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| BLi03212 | -38 | 6.2 | CAAATCGAAACAATTACGTTTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yciC | ||||
| Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family | ||||
| Bacillus licheniformis DSM 13 | BLi03212 | -38 | 6.2 | CAAATCGAAACAATTACGTTTTA |
| Anoxybacillus flavithermus WK1 | Aflv_0397 | -40 | 7 | TAAATCGTAATGATTACGTTTTA |
| Bacillus cereus ATCC 14579 | BC1705 | -93 | 6.9 | TAAATCGTAATCATTATGATTTA |
| -39 | 7 | TAAAACGTAATCATTACGATTTA | ||
| Bacillus halodurans C-125 | BH1790 | -195 | 6.7 | CAAAGCGTAATTATTACGATTTA |
| -54 | 5.5 | CAAATCGTAATGATAACTTTTAT | ||
| Oceanobacillus iheyensis HTE831 | OB3430 | -247 | 6 | TTAATCGTAATCGTTACGATGTA |
|
Position: -39
Score: 6.6 Sequence: TAAAACGTAATTATTACGTTTTG
Locus tag: BLi03214
|
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| BLi03214 | -39 | 6.6 | TAAAACGTAATTATTACGTTTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpmE2 | ||||
| Ortholog function: 50S ribosomal protein L31 type B | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU30700 | -39 | 7 | TAAAACGTAATTATTACGATTTA |
| Bacillus amyloliquefaciens FZB42 | RBAM_027710 | -39 | 6.8 | TAAAACGTAATTATTACGATTTG |
| Bacillus pumilus SAFR-032 | BPUM_2709 | -44 | 6.5 | TAAAGCGTAATGATTACGTTTTG |
| Bacillus licheniformis DSM 13 | BLi03214 | -39 | 6.6 | TAAAACGTAATTATTACGTTTTG |