Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Bacillus licheniformis DSM 13

Reference regulog properties
Source regulog: Zur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus licheniformis DSM 13
Orthologous TF(s) BLi02686
Regulated genes 9
Built upon 67 sites [see more]
Predicted regulatory interactions in Bacillus licheniformis DSM 13
Locus tag Position Score Sequence
Position: -120
Score: 5.9
Sequence: CTAAACGAAATCATTTCGATTTA
Position: -44
Score: 6
Sequence: TAAATAGGAACTATTTCGATTTA
Locus tag: BLi00762
BLi00762 -120 5.9 CTAAACGAAATCATTTCGATTTA
-44 6 TAAATAGGAACTATTTCGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: folE2
Ortholog function: GTP cyclohydrolase I (EC 3.5.4.16) type 2
Bacillus subtilis subsp. subtilis str. 168 BSU03340 -44 6.7 TAAATAGTAATTATTACGATTTG
Bacillus licheniformis DSM 13 BLi00762 -120 5.9 CTAAACGAAATCATTTCGATTTA
-44 6 TAAATAGGAACTATTTCGATTTA
Bacillus halodurans C-125 BH0998 -41 6.2 TAAATCGTAATTATTCTTATTTA
Position: -46
Score: 7
Sequence: TAAATCGTAATAATTACGATTTG
Locus tag: BLi00765
BLi00765 -46 7 TAAATCGTAATAATTACGATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Bacillus subtilis subsp. subtilis str. 168 BSU03360 -37 5.8 TAAATCGTAATCATTCTATTTTA
Bacillus amyloliquefaciens FZB42 RBAM_003550 -103 6.6 TAAATAGTAACGATTACGATTTA
-38 5.7 TAAATCGTAATCATTCTATTTTG
Bacillus pumilus SAFR-032 BPUM_3311 -69 6.6 CAAATCGTAATCATTACTTTTTA
Bacillus licheniformis DSM 13 BLi00765 -46 7 TAAATCGTAATAATTACGATTTG
Bacillus clausii KSM-K16 ABC4020 -40 6.9 TAATTCGTAATCATTACGATTTA
Oceanobacillus iheyensis HTE831 OB3429 -82 6.3 TTAATCGTAATGATTACGTTTTT
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Position: -44
Score: 6.7
Sequence: TAAATCGTAATCATTACGCTTTG
Locus tag: BLi00952
BLi00952 -44 6.7 TAAATCGTAATCATTACGCTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpsN2
Ortholog function: 30S ribosomal protein S14
Bacillus subtilis subsp. subtilis str. 168 BSU08880 -40 6.6 TAAATCGTAACAATTTCGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_009150 -37 6.7 CAAAACGTAATTATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_3312 -69 6.6 CAAATCGTAATCATTACTTTTTA
Bacillus licheniformis DSM 13 BLi00952 -44 6.7 TAAATCGTAATCATTACGCTTTG
Bacillus clausii KSM-K16 ABC4019 -45 6.1 TAAATCGTAATAATAATGATTTT
Oceanobacillus iheyensis HTE831 OB3432 -247 6 TTAATCGTAATCGTTACGATGTA
Position: -245
Score: 6.7
Sequence: CAAATCGTAATAATTACGTTTTG
Locus tag: BLi01934
BLi01934 -245 6.7 CAAATCGTAATAATTACGTTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH0367
Ortholog function: NADH-ubiquinone oxidoreductase 51 kDa subunit
Bacillus licheniformis DSM 13 BLi01934 -245 6.7 CAAATCGTAATAATTACGTTTTG
-41 5.9 CAAATCGGAATAATTCTGTTTTA
Bacillus halodurans C-125 BH0367 -40 6.6 TAAATAGGAATTATTACGATTTA
Position: -98
Score: 6.8
Sequence: TAAATCGTAATTATTATGATTTA
Locus tag: BLi01970
BLi01970 -98 6.8 TAAATCGTAATTATTATGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufE2
Ortholog function: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
Bacillus licheniformis DSM 13 BLi01970 -98 6.8 TAAATCGTAATTATTATGATTTA
Bacillus halodurans C-125 BH0369 -40 6.6 TAAATAGGAATTATTACGATTTA
Position: -37
Score: 6.6
Sequence: TAAAGCGTAATGATTACGTTTTA
Locus tag: BLi02553
BLi02553 -37 6.6 TAAAGCGTAATGATTACGTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmGA1
Ortholog function: 50S ribosomal protein L33
Bacillus amyloliquefaciens FZB42 RBAM_022140 -40 6.8 TAAAACGTAATAATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_3310 -42 6.5 CAAATCGTAACCATTACGAATTA
Bacillus licheniformis DSM 13 BLi02553 -37 6.6 TAAAGCGTAATGATTACGTTTTA
Anoxybacillus flavithermus WK1 Aflv_1438 -45 6.3 CAAAACGTAATGATTACTATTTT
Bacillus cereus ATCC 14579 BC4339 -55 7 TAAATCGTAATCATTACGTTTTA
Position: -111
Score: 6.2
Sequence: TAAAACGTAATTGTTTCGATTTG
Locus tag: BLi03211
BLi03211 -111 6.2 TAAAACGTAATTGTTTCGATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytiB
Ortholog function: Carbonic anhydrase (EC 4.2.1.1)
Bacillus subtilis subsp. subtilis str. 168 BSU30690 -39 7 TAAAACGTAATTATTACGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_027700 -39 6.8 TAAAACGTAATTATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_2707 -188 6.1 TAGATAGAAATGATTACGATTTA
-151 6.5 TGTATCGTAATAATTACGATTTG
Bacillus licheniformis DSM 13 BLi03211 -111 6.2 TAAAACGTAATTGTTTCGATTTG
Position: -38
Score: 6.2
Sequence: CAAATCGAAACAATTACGTTTTA
Locus tag: BLi03212
BLi03212 -38 6.2 CAAATCGAAACAATTACGTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Bacillus licheniformis DSM 13 BLi03212 -38 6.2 CAAATCGAAACAATTACGTTTTA
Anoxybacillus flavithermus WK1 Aflv_0397 -40 7 TAAATCGTAATGATTACGTTTTA
Bacillus cereus ATCC 14579 BC1705 -93 6.9 TAAATCGTAATCATTATGATTTA
-39 7 TAAAACGTAATCATTACGATTTA
Bacillus halodurans C-125 BH1790 -195 6.7 CAAAGCGTAATTATTACGATTTA
-54 5.5 CAAATCGTAATGATAACTTTTAT
Oceanobacillus iheyensis HTE831 OB3430 -247 6 TTAATCGTAATCGTTACGATGTA
Position: -39
Score: 6.6
Sequence: TAAAACGTAATTATTACGTTTTG
Locus tag: BLi03214
BLi03214 -39 6.6 TAAAACGTAATTATTACGTTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmE2
Ortholog function: 50S ribosomal protein L31 type B
Bacillus subtilis subsp. subtilis str. 168 BSU30700 -39 7 TAAAACGTAATTATTACGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_027710 -39 6.8 TAAAACGTAATTATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_2709 -44 6.5 TAAAGCGTAATGATTACGTTTTG
Bacillus licheniformis DSM 13 BLi03214 -39 6.6 TAAAACGTAATTATTACGTTTTG
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