Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CymR regulog to Bacillus sp. B14905

Reference regulog properties
Source regulog: CymR - Bacillales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Cysteine metabolism
Effector: O-acetyl-L-serine; CysK, cysteine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus sp. B14905
Orthologous TF(s) BB14905_09595
Regulated genes 5
Built upon 65 sites [see more]
Predicted regulatory interactions in Bacillus sp. B14905
Locus tag Position Score Sequence
Position: -286
Score: 6
Sequence: TTATTCTTATTATATTACTAAGAATTA
Locus tag: BB14905_11405
BB14905_11405 -286 6 TTATTCTTATTATATTACTAAGAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ylnD
Ortholog function: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Bacillus amyloliquefaciens FZB42 RBAM_015440 -299 4.7 TTATTCCTATCAAAAAACTCGGGTTGA
Anoxybacillus flavithermus WK1 Aflv_0312 -48 5.6 TTAATCCTAGTTGTTTTATAAGAATAA
Oceanobacillus iheyensis HTE831 OB1655 -98 5.4 CAATTCACATTGTATTACTATGAATTA
Position: -78
Score: 5.6
Sequence: TAAAACATACTTGAATTATAGGGATTA
Locus tag: BB14905_20735
BB14905_20735 -78 5.6 TAAAACATACTTGAATTATAGGGATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhcL
Ortholog function: Sodium-cystine symporter
Bacillus subtilis subsp. subtilis str. 168 BSU09130 -73 5.2 TAATTCGCACTTGACCCATCGGAATTA
Bacillus licheniformis DSM 13 BLi00975 -77 5.1 TAATTCCTACTTGACCAATCAGGTTTG
Bacillus cereus ATCC 14579 BC4242 -72 5.5 AATTTCATAGTTGACTTATAGGTTTTA
-39 4.8 TATATTCTATATAACAGATTGGAATTA
Bacillus clausii KSM-K16 ABC2897 -78 5.2 TAATTCCCACTTGACTCATATGATTAT
Oceanobacillus iheyensis HTE831 OB2714 -56 6.2 TAATTCGTAGTAAATTAATTGGAATTA
Paenibacillus sp. JDR-2 Pjdr2_6037 -148 5.1 AATTCCCCATAGAAATAGTCGGATTTA
-41 5 TAATTCCAATCAAACAACTTGGATTAG
Position: -42
Score: 5.6
Sequence: TAAAACCTATAAAAATAGTAGGGATTG
Locus tag: BB14905_08963
BB14905_08963 -42 5.6 TAAAACCTATAAAAATAGTAGGGATTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysK
Ortholog function: Cysteine synthase (EC 2.5.1.47)
Bacillus subtilis subsp. subtilis str. 168 BSU00730 -39 5.4 TAATACCAATACAAATAGTCGGAAATT
Bacillus amyloliquefaciens FZB42 RBAM_000840 -39 5.8 TAATACCAATAAATTTAGTCGGAAATT
Bacillus pumilus SAFR-032 BPUM_0057 -40 4.6 TtAaTaCaATaAAATTAcTcGGAgaTA
Bacillus licheniformis DSM 13 BLi00089 -38 5.6 TAATCCCAATAAAATTACTCGGAAATT
Anoxybacillus flavithermus WK1 Aflv_0065 -30 5 CAAATTCTATAAAAATACTCGGGATTA
Geobacillus kaustophilus HTA426 GK0065 -38 4.7 CAAAGTCGATAAAATTAATGGGGATTA
Bacillus cereus ATCC 14579 BC0075 -39 5.3 TAAAACCAATAAAAATACTCGGTGTTA
Bacillus halodurans C-125 BH0088 -39 5.2 GAAAACCAATAAATTTACTTGGGATTA
Bacillus clausii KSM-K16 ABC0109 -42 4.9 TAAAACCAATGAAGATACTAGGGATTG
Oceanobacillus iheyensis HTE831 OB0084 -41 6 TAAATCTTATAAAAATACTTGGAATTA
Paenibacillus sp. JDR-2 Pjdr2_0074 -44 5.7 AAAAACCAACTAAATTAGTCGGAATAA
Position: -52
Score: 5.6
Sequence: TAATCCTTAGTAAATATATAAGATTTA
Locus tag: BB14905_23288
BB14905_23288 -52 5.6 TAATCCTTAGTAAATATATAAGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydbM
Ortholog function: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Bacillus subtilis subsp. subtilis str. 168 BSU04520 -45 6.4 TAATACATATTAAATTTATCGGAATTA
Bacillus amyloliquefaciens FZB42 RBAM_004850 -82 6 TAATACTTATTAACTTTATCGGAATTA
Bacillus pumilus SAFR-032 BPUM_2341 -89 5.5 TAAATCCTATAAGTAAAGTGTGTTTTA
-61 4.9 TTATTCCGATTGGAAAAATCAGATATG
Bacillus licheniformis DSM 13 BLi00540 -45 5.9 TAATACTTATTAAATCTATCGGAATTT
Oceanobacillus iheyensis HTE831 OB0293 -45 5.5 TTATACCTATTGACTTACTAGGCATTA
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