Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RocR regulog to Geobacillus thermodenitrificans NG80-2

Reference regulog properties
Source regulog: RocR - Bacillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Arginine degradation; Ornithine degradation
Effector: Ornithine; L-citrulline
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus thermodenitrificans NG80-2
Orthologous TF(s) GTNG_0167
Regulated genes 3
Built upon 26 sites [see more]
Predicted regulatory interactions in Geobacillus thermodenitrificans NG80-2
Locus tag Position Score Sequence
Position: -38
Score: 8.1
Sequence: CGAAAAAT-(1)-TTTTTGCT
Locus tag: GTNG_0169
GTNG_0169 -38 8.1 CGAAAAAT-(1)-TTTTTGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocA
Ortholog function: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
Geobacillus kaustophilus HTA426 GK0187 -168 7.7 TGAAAAAA-(1)-TTTTTGCT
-93 8.1 TGAAAAAT-(1)-ATTTTGCA
-37 7.7 CGAAAAAT-(1)-TTTTTGCC
Bacillus halodurans C-125 BH3940 -215 7.3 TGCAAATT-(1)-TTTTTTCG
-172 8 AGAAAAAT-(1)-ATTTTTCG