Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of KdgR regulog to Bacillus subtilis subsp. subtilis str. NCIB 3610

Reference regulog properties
Source regulog: KdgR - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galacturonate utilization; Glucuronate utilization
Effector: 2-keto-3-deoxygluconate
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. NCIB 3610
Orthologous TF(s) BsubsN3_010100012097
Regulated genes 2
Built upon 13 sites [see more]
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. NCIB 3610
Locus tag Position Score Sequence
Position: -173
Score: 6.2
Sequence: TTTGGTAACGGTTTCAAA
Position: -42
Score: 6.1
Sequence: TTTGAAATCGGTTTCAAA
Locus tag: BsubsN3_010100012097
BsubsN3_010100012097 -173 6.2 TTTGGTAACGGTTTCAAA
-42 6.1 TTTGAAATCGGTTTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgR
Ortholog function: Transcriptional regulator of pectin utilization, LacI family
Bacillus licheniformis DSM 13 BLi03828 -197 6.2 TTTGGTAACGGTTTCAAA
-42 6.1 TTTGAAATCGGTTTCAAA
Bacillus pumilus SAFR-032 BPUM_3245 -215 5.8 TTTGGTATCGGTTTCAAG
-54 5.5 TTTGAAATCGGTTTCGAA
Bacillus subtilis subsp. subtilis str. 168 BSU22120 -173 6.2 TTTGGTAACGGTTTCAAA
-42 6.1 TTTGAAATCGGTTTCAAA
Position: -197
Score: 6.1
Sequence: TTTGAAACCGATTTCAAA
Position: -66
Score: 6.2
Sequence: TTTGAAACCGTTACCAAA
Locus tag: BsubsN3_010100012102
BsubsN3_010100012102 -197 6.1 TTTGAAACCGATTTCAAA
-66 6.2 TTTGAAACCGTTACCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: kduI
Ortholog function: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Bacillus licheniformis DSM 13 BLi03829 -231 6.1 TTTGAAACCGATTTCAAA
-76 6.2 TTTGAAACCGTTACCAAA
Bacillus pumilus SAFR-032 BPUM_3246 -226 5.5 TTCGAAACCGATTTCAAA
-65 5.8 CTTGAAACCGATACCAAA
Bacillus subtilis subsp. subtilis str. 168 BSU22130 -197 6.1 TTTGAAACCGATTTCAAA
-66 6.2 TTTGAAACCGTTACCAAA