Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Bacillus subtilis subsp. subtilis str. NCIB 3610

Reference regulog properties
Source regulog: Rex - Bacillales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. NCIB 3610
Orthologous TF(s) BsubsN3_010100003319
Regulated genes 5
Built upon 64 sites [see more]
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. NCIB 3610
Locus tag Position Score Sequence
Position: -85
Score: 6
Sequence: TTTGTGAAGTGTTGCACAAT
Position: -62
Score: 6
Sequence: AATGTGAAATACTTCACAAA
Locus tag: BsubsN3_010100001696
BsubsN3_010100001696 -85 6 TTTGTGAAGTGTTGCACAAT
-62 6 AATGTGAAATACTTCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Bacillus subtilis subsp. subtilis str. 168 BSU03050 -85 6 TTTGTGAAGTGTTGCACAAT
-62 6 AATGTGAAATACTTCACAAA
Bacillus amyloliquefaciens FZB42 RBAM_003290 -82 6.3 TTTGTGAAGTATTGCACAAT
-59 5.6 AATGTGAAATACTTCACAAG
Bacillus pumilus SAFR-032 BPUM_0277 -79 6.3 TTTGTGAAGTATTGCACAAT
-56 5.7 AATGTGAAATACTTCACATA
Bacillus licheniformis DSM 13 BLi00366 -82 6 TATGTGAAGTATTGCACAAT
-59 5.8 AATGTGAAGAATTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_0889 -58 5.4 TTTGTGAAACAGTGTACAAT
Geobacillus kaustophilus HTA426 GK0475 -42 5.5 AATGTGAATATATTCACAAA
Bacillus halodurans C-125 BH3937 -276 6.2 AATGTGAAATATTTCACAAA
-219 5.7 CATGTGAAATATTTCACAAA
-44 5.1 CATGTGAAAATATTCACAAA
Bacillus clausii KSM-K16 ABC2872 -68 6.4 TTTGTGAAATAATGCACAAT
-45 5.9 AATGTGAATAATTTCACAAA
Oceanobacillus iheyensis HTE831 OB3279 -68 6.5 TTTGTGAAATATTTCACAAT
Position: -68
Score: 5.1
Sequence: TTTGTTATATAATTTACAAA
Locus tag: BsubsN3_010100002509
BsubsN3_010100002509 -68 5.1 TTTGTTATATAATTTACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydbI
Ortholog function: Putative integral inner membrane protein
Bacillus subtilis subsp. subtilis str. 168 BSU04480 -68 5.1 TTTGTTATATAATTTACAAA
Bacillus amyloliquefaciens FZB42 RBAM_004810 -73 5.1 TTTGTTATATAATTTACAAT
Position: -113
Score: 6
Sequence: ATTGTGCATGAATTCACAAT
Locus tag: BsubsN3_010100006727
BsubsN3_010100006727 -113 6 ATTGTGCATGAATTCACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjlC
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU12280 -113 6 ATTGTGCATGAATTCACAAT
Bacillus amyloliquefaciens FZB42 RBAM_012360 -110 6 ATTGTGCATGAATTCACAAT
Bacillus licheniformis DSM 13 BLi02135 -80 6 TTTGTGCATAAATTCACAAA
Bacillus cereus ATCC 14579 BC5060 -82 4.8 TTTGTGAAACTTTGTATAAA
Paenibacillus sp. JDR-2 Pjdr2_6270 -97 5.4 ATTGTGAATAATTTCACTTT
Position: -66
Score: 6.4
Sequence: ATTGTGAAATACTTCACAAT
Locus tag: BsubsN3_010100020467
BsubsN3_010100020467 -66 6.4 ATTGTGAAATACTTCACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcJ
Ortholog function: Formate/nitrite family of transporters
Bacillus subtilis subsp. subtilis str. 168 BSU38060 -66 6.4 ATTGTGAAATACTTCACAAT
Bacillus licheniformis DSM 13 BLi04135 -89 6.2 TTTGTGAAATGTTTCACAAT
Anoxybacillus flavithermus WK1 Aflv_1436 -43 4.9 AGTGTGAAAAACATCACAAA
Bacillus cereus ATCC 14579 BC1308 -103 6.1 TTTGTGAAACATTGCACAAA
Position: -120
Score: 5.8
Sequence: TTTGTGAAATATTGAGCAAT
Locus tag: BsubsN3_010100020832
BsubsN3_010100020832 -120 5.8 TTTGTGAAATATTGAGCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cydA
Ortholog function: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Bacillus subtilis subsp. subtilis str. 168 BSU38760 -120 5.8 TTTGTGAAATATTGAGCAAT
-85 5.3 TTTGTGAATTACTGATCAAA
-53 5.4 TTTGTGAAGTAGTGAGCAAA
Bacillus amyloliquefaciens FZB42 RBAM_036010 -106 5.5 TTTGTGAAACATTGAGCAAA
-76 5 TTTGTGAAATACCGAGCAAT
-44 5.5 TTTGTGAAATGTTGAGCAAT
Bacillus pumilus SAFR-032 BPUM_3519 -98 5.6 TTTGTGAACCATTGAACAAA
-68 4.8 TTTGTGAAGTGGTGAGCATA
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