Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CcpC regulog to Bacillus subtilis subsp. subtilis str. NCIB 3610

Reference regulog properties
Source regulog: CcpC - Bacillales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor
Biological process: Citrate metabolism
Effector: Citrate
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. NCIB 3610
Orthologous TF(s) BsubsN3_010100007797
Regulated genes 3
Built upon 12 sites [see more]
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. NCIB 3610
Locus tag Position Score Sequence
Position: -37
Score: 5.7
Sequence: ATAAGAAAAACTTAT
Locus tag: BsubsN3_010100007797
BsubsN3_010100007797 -37 5.7 ATAAGAAAAACTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccpC
Ortholog function: Transcriptional repressor of citB and citZ, LacI family
Bacillus subtilis subsp. subtilis str. 168 BSU14140 -37 5.7 ATAAGAAAAACTTAT
Bacillus pumilus SAFR-032 BPUM_1310 -34 5.7 ATAAGAAAAACTTAT
Bacillus licheniformis DSM 13 BLi01628 -32 5.7 ATAAGAAAAACTTAT
Oceanobacillus iheyensis HTE831 OB1497 -28 5.2 ATAATATATACTTAT
Position: -141
Score: 5.1
Sequence: ATAAGTCGAACTTAT
Locus tag: BsubsN3_010100009852
BsubsN3_010100009852 -141 5.1 ATAAGTCGAACTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citB
Ortholog function: Aconitate hydratase ( EC 4.2.1.3 )
Bacillus subtilis subsp. subtilis str. 168 BSU18000 -141 5.1 ATAAGTCGAACTTAT
Bacillus amyloliquefaciens FZB42 RBAM_017800 -146 5.3 ATAAGACGATCTTAT
Bacillus pumilus SAFR-032 BPUM_1699 -152 5.7 ATAAGATAAACTTAT
Bacillus licheniformis DSM 13 BLi02047 -147 5.5 ATAAGTCATTCTTAT
Bacillus cereus ATCC 14579 BC3616 -145 4.9 ATAAAGAAAACTTAT
Oceanobacillus iheyensis HTE831 OB1681 -198 5.4 ATAAGATTTTGTTAT
Position: -172
Score: 5.5
Sequence: ATAAGAATTTGTTAT
Locus tag: BsubsN3_010100015802
BsubsN3_010100015802 -172 5.5 ATAAGAATTTGTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citZ
Ortholog function: Citrate synthase (EC 2.3.3.1)
Bacillus subtilis subsp. subtilis str. 168 BSU29140 -172 5.1 ATAAAAATTTGTTAT
Bacillus amyloliquefaciens FZB42 RBAM_026180 -172 5.5 ATAAGAATTTGTTAT
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