Propagation of CodY regulog to Bacillus weihenstephanensis KBAB4
| Source regulog: | CodY - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | CodY |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus weihenstephanensis KBAB4 |
| Orthologous TF(s) | BcerKBAB4_3651 |
| Regulated genes | 59 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -30
Score: 4.7 Sequence: AATTTTTAGACAATA
Locus tag: BcerKBAB4_0007
|
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| BcerKBAB4_0007 | -30 | 4.7 | AATTTTTAGACAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yaaC | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Bacillus pumilus SAFR-032 | BPUM_0503 | -36 | 5 | AATTTTTAGAAAATA |
| Bacillus licheniformis DSM 13 | BLi00013 | -36 | 5 | AATTTTTAGAAAATA |
| Bacillus cereus ATCC 14579 | BC0012 | -30 | 4.7 | AATTTTTAGACAATA |
|
Position: -87
Score: 5.1 Sequence: AATTTTTAAAAAATT
Locus tag: BcerKBAB4_0043
|
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| BcerKBAB4_0043 | -87 | 5.1 | AATTTTTAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spoVG | ||||
| Ortholog function: Stage V sporulation protein G required for spore cortex synthesis | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU00490 | -98 | 4.4 | TTTTTTCAAAAAATA |
| Geobacillus kaustophilus HTA426 | GK0042 | -96 | 4.6 | AATTTATAAAAAATT |
| Bacillus cereus ATCC 14579 | BC0053 | -87 | 5.1 | AATTTTTAAAAAATT |
|
Position: -120
Score: 4.6 Sequence: TATATTTTAAAAATT
Position: -101
Score: 4.6 Sequence: AATTTTTAAAATATA
Locus tag: BcerKBAB4_0290
|
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| BcerKBAB4_0290 | -120 | 4.6 | TATATTTTAAAAATT | |
| -101 | 4.6 | AATTTTTAAAATATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putC | ||||
| Ortholog function: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03210 | -106 | 4.1 | AATAATCAGAATCTT |
| -89 | 4.5 | TATTTTGAGAATATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_003450 | -23 | 4.8 | TATTTTTAGAATATT |
| Bacillus licheniformis DSM 13 | BLi00374 | -155 | 4.3 | AAGTTTCTGAAAAAA |
| Bacillus cereus ATCC 14579 | BC0344 | -121 | 4.6 | TATATTTTAAAAATT |
| -102 | 4.6 | AATTTTTAAAATATA | ||
|
Position: -96
Score: 4.6 Sequence: TTTTTTCTTAAAATT
Locus tag: BcerKBAB4_0322
|
||||
| BcerKBAB4_0322 | -96 | 4.6 | TTTTTTCTTAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amhX | ||||
| Ortholog function: Amidohydrolase amhX (EC 3.5.1.-) | ||||
| Bacillus cereus ATCC 14579 | BC0374 | -95 | 4.6 | TTTTTTCTTAAAATT |
|
Position: -60
Score: 4.8 Sequence: AATTTTAATAAAATT
Locus tag: BcerKBAB4_0409
|
||||
| BcerKBAB4_0409 | -60 | 4.8 | AATTTTAATAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rocR | ||||
| Ortholog function: Transcriptional activator of arginine utilization, Fis family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU40350 | -34 | 4.7 | AATATTAAGAAAATA |
| Bacillus licheniformis DSM 13 | BLi00421 | -49 | 4.8 | AATTTTCAGAACATT |
| Bacillus cereus ATCC 14579 | BC0473 | -60 | 4.8 | AATTTTAATAAAATT |
|
Position: -83
Score: 5.3 Sequence: AATTTTCAAAAAATT
Locus tag: BcerKBAB4_1088
|
||||
| BcerKBAB4_1088 | -83 | 5.3 | AATTTTCAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Aflv_2134 | ||||
| Ortholog function: Uncharacterized membrane protein | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2134 | -142 | 4.6 | AATTTTCTAACATTT |
| Bacillus cereus ATCC 14579 | BC1178 | -83 | 5.3 | AATTTTCAAAAAATT |
|
Position: 18
Score: 4.4 Sequence: TATTTTAAAAAAATA
Locus tag: BcerKBAB4_1090
|
||||
| BcerKBAB4_1090 | 18 | 4.4 | TATTTTAAAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppB | ||||
| Ortholog function: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | ||||
| Bacillus pumilus SAFR-032 | BPUM_1071 | -38 | 4.4 | AATATACAGAAAAGT |
| Anoxybacillus flavithermus WK1 | Aflv_2132 | -102 | 4.6 | AAATGTTAGAAAATT |
| Bacillus cereus ATCC 14579 | BC1180 | -65 | 4.4 | TATTTTAAAAAAATA |
|
Position: -106
Score: 4.6 Sequence: ACATTTCTGAAAATT
Position: -76
Score: 4.6 Sequence: ATTTTTCAGAATAAT
Locus tag: BcerKBAB4_1142
|
||||
| BcerKBAB4_1142 | -106 | 4.6 | ACATTTCTGAAAATT | |
| -76 | 4.6 | ATTTTTCAGAATAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putP | ||||
| Ortholog function: Proline/sodium symporter (TC 2.A.21.2.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03220 | -106 | 4.1 | AATAATCAGAATCTT |
| -89 | 4.5 | TATTTTGAGAATATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_003460 | -23 | 4.8 | TATTTTTAGAATATT |
| Bacillus licheniformis DSM 13 | BLi00375 | -85 | 4.5 | ATTAGTCTAAAAATT |
| Geobacillus kaustophilus HTA426 | GK3452 | -158 | 4.8 | AATTTACAGAATATT |
| Bacillus cereus ATCC 14579 | BC1231 | -106 | 4.6 | ACATTTCTGAAAATT |
| -76 | 4.6 | ATTTTTCAGAATAAT | ||
|
Position: -149
Score: 4.6 Sequence: AATTTTCTGATAAAA
Locus tag: BcerKBAB4_1218
|
||||
| BcerKBAB4_1218 | -149 | 4.6 | AATTTTCTGATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lutA | ||||
| Ortholog function: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit | ||||
| Bacillus pumilus SAFR-032 | BPUM_1672 | -103 | 4.6 | AAATTTCAGAAATTT |
| Bacillus cereus ATCC 14579 | BC1303 | -165 | 4.5 | AATCTTTTAAAAATT |
| -149 | 4.6 | AATTTTCTGATAAAA | ||
| Bacillus halodurans C-125 | BH1832 | -123 | 4.4 | ATTTATCAGTAAATT |
|
Position: -88
Score: 5 Sequence: AATATTCAGAAAATA
Locus tag: BcerKBAB4_1311
|
||||
| BcerKBAB4_1311 | -88 | 5 | AATATTCAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltO | ||||
| Ortholog function: Proton/sodium-glutamate symport protein | ||||
| Bacillus pumilus SAFR-032 | BPUM_0421 | -252 | 5 | AATTTTCTAAAAATA |
| -230 | 4.4 | AATAGTATGAAAATA | ||
| Anoxybacillus flavithermus WK1 | Aflv_1459 | -140 | 4.9 | ATTTTTCTGACAATT |
| Bacillus cereus ATCC 14579 | BC1389 | -88 | 4.6 | AAAATTCAGAAAATA |
| Bacillus halodurans C-125 | BH3820 | -258 | 4.4 | TATTTTTTGAAAAAA |
| Bacillus clausii KSM-K16 | ABC3908 | -77 | 4.3 | AATTTTTAATAAAAT |
| Oceanobacillus iheyensis HTE831 | OB0021 | -36 | 4.9 | AATTTTCTGAAAAAA |
|
Position: -89
Score: 5.3 Sequence: AATTTTCTAAAAATT
Locus tag: BcerKBAB4_1318
|
||||
| BcerKBAB4_1318 | -89 | 5.3 | AATTTTCTAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dat | ||||
| Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
| Bacillus pumilus SAFR-032 | BPUM_2473 | -166 | 4.7 | AATTGTCTAATAATT |
| -54 | 4.6 | AAGTGTCTGAAAATT | ||
| Bacillus licheniformis DSM 13 | BLi02962 | -192 | 4.7 | AATTGTCTAATAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0590 | -136 | 4.8 | AATAATCAAAAAATT |
| -79 | 4.7 | AATTTTCAAATAAAT | ||
| Bacillus cereus ATCC 14579 | BC1396 | -167 | 4.4 | AATTTTTTGACTTTT |
| -88 | 5.3 | AATTTTCTAAAAATT | ||
|
Position: -79
Score: 4.7 Sequence: AATTTTTAAAAAAAT
Position: -78
Score: 4.6 Sequence: ATTTTTAAAAAAATT
Locus tag: BcerKBAB4_1479
|
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| BcerKBAB4_1479 | -79 | 4.7 | AATTTTTAAAAAAAT | |
| -78 | 4.6 | ATTTTTAAAAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yppF | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU22260 | -76 | 4.3 | AATTTTTTAAAAACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_020410 | -76 | 4.3 | AATTTTTTAAAAACA |
| Anoxybacillus flavithermus WK1 | Aflv_1145 | -68 | 4.4 | AATTTTTTGAATTTA |
| Bacillus cereus ATCC 14579 | BC1558 | -79 | 5.1 | AATTTTTAAAAAATT |
|
Position: -80
Score: 4.7 Sequence: AAGTTTCTGAATATT
Position: -71
Score: 4.8 Sequence: AATATTTATAAAATT
Locus tag: BcerKBAB4_1522
|
||||
| BcerKBAB4_1522 | -80 | 4.7 | AAGTTTCTGAATATT | |
| -71 | 4.8 | AATATTTATAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywcB | ||||
| Ortholog function: Hypothetical Membrane Spanning Protein | ||||
| Bacillus cereus ATCC 14579 | BC1608 | -80 | 4.7 | AAGTTTCTGAATATT |
| -71 | 4.8 | AATATTTATAAAATT | ||
|
Position: -171
Score: 4.3 Sequence: TATTTTTGAAAAATT
Position: -103
Score: 4.3 Sequence: AATCTTCTAAAAACT
Locus tag: BcerKBAB4_2156
|
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| BcerKBAB4_2156 | -171 | 4.3 | TATTTTTGAAAAATT | |
| -103 | 4.3 | AATCTTCTAAAAACT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citZ | ||||
| Ortholog function: Citrate synthase (si) (EC 2.3.3.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29140 | -224 | 4.3 | AAATGTCTGATTATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026180 | -224 | 4.2 | ATTAATCAGATTATT |
| Bacillus pumilus SAFR-032 | BPUM_2556 | -210 | 4.3 | AAATGTCTGATTATT |
| Bacillus licheniformis DSM 13 | BLi03062 | -225 | 4.5 | AAATGTCTGATAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -209 | 4.3 | AAAAGTCTGATAATT |
| Geobacillus kaustophilus HTA426 | GK2736 | -201 | 4.3 | AAAAGTCTGATAATT |
| Oceanobacillus iheyensis HTE831 | OB2168 | -222 | 4.3 | AAATATTAAAAAATT |
|
Position: -29
Score: 4.5 Sequence: AATATTTAGATAATA
Locus tag: BcerKBAB4_2888
|
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| BcerKBAB4_2888 | -29 | 4.5 | AATATTTAGATAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: GK1369 | ||||
| Ortholog function: Predicted histidine uptake transporter | ||||
| Geobacillus kaustophilus HTA426 | GK1369 | -102 | 4.3 | AAAATTCAAAAAAAT |
|
Position: -48
Score: 4.9 Sequence: AAATTTCAGAATATT
Locus tag: BcerKBAB4_3048
|
||||
| BcerKBAB4_3048 | -48 | 4.9 | AAATTTCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycgA | ||||
| Ortholog function: Putative integral inner membrane protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_003260 | -182 | 4.6 | TATTTTCTGAATAGT |
| Bacillus pumilus SAFR-032 | BPUM_0276 | -52 | 5 | ATTATTCTGAAAATT |
|
Position: -132
Score: 5 Sequence: AATTTTCTGATTATT
Locus tag: BcerKBAB4_3096
|
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| BcerKBAB4_3096 | -132 | 5 | AATTTTCTGATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cueR | ||||
| Ortholog function: Transcriptional regulator, MerR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU09560 | -139 | 4.4 | AAAAATTTGAAAATT |
| Bacillus pumilus SAFR-032 | BPUM_0905 | -153 | 5 | AATAATCTGAAAATT |
| Bacillus licheniformis DSM 13 | BLi01027 | -112 | 4.5 | AATATTTAGATAAAT |
|
Position: -249
Score: 4.4 Sequence: AATTTACTGAAAAAA
Position: -227
Score: 4.4 Sequence: ACTTTTCAGATAAAT
Locus tag: BcerKBAB4_3168
|
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| BcerKBAB4_3168 | -249 | 4.4 | AATTTACTGAAAAAA | |
| -227 | 4.4 | ACTTTTCAGATAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybxG | ||||
| Ortholog function: Amino acid permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU02060 | -257 | 4.8 | AATATTCAAATAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_002460 | -268 | 4.4 | TATTATCTTAATATT |
| Bacillus licheniformis DSM 13 | BLi00220 | -241 | 4.4 | TATTATAAGAATATT |
|
Position: -233
Score: 4.6 Sequence: TGTTTTCTGAATATT
Locus tag: BcerKBAB4_3331
|
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| BcerKBAB4_3331 | -233 | 4.6 | TGTTTTCTGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuE | ||||
| Ortholog function: Sodium/proline symporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU06660 | -256 | 5 | ATTTTTCTGAATATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_007060 | -273 | 4.5 | ATATGTCAGAAAATT |
| Bacillus pumilus SAFR-032 | BPUM_0643 | -231 | 4.9 | ATTTATCAGAAAATT |
| Bacillus licheniformis DSM 13 | BLi00728 | -289 | 5.1 | AATATTCAGAATATT |
| Bacillus cereus ATCC 14579 | BC3644 | -214 | 5.3 | AATTTTCTGAATATT |
|
Position: -36
Score: 4.8 Sequence: AATATTCAAATAATT
Locus tag: BcerKBAB4_3340
|
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| BcerKBAB4_3340 | -36 | 4.8 | AATATTCAAATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hutP | ||||
| Ortholog function: Hut operon positive regulatory protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU39340 | -25 | 4.1 | AGTTATCAGAATTTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_036400 | -36 | 4.5 | AGTTATCAGAATATT |
| Bacillus cereus ATCC 14579 | BC3653 | -36 | 4.8 | AATATTCAAATAATT |
|
Position: -113
Score: 4.6 Sequence: ATTTTTTAGAAAAAT
Locus tag: BcerKBAB4_3547
|
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| BcerKBAB4_3547 | -113 | 4.6 | ATTTTTTAGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spoVS | ||||
| Ortholog function: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU16980 | -186 | 4.4 | TATTTTATAAAAATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_016820 | -186 | 4.4 | TATTTTATAAAAATA |
| Anoxybacillus flavithermus WK1 | Aflv_1527 | -116 | 4.6 | ATTTTTCTGAAAAAA |
| Bacillus cereus ATCC 14579 | BC3776 | -113 | 4.6 | ATTTTTTAGAAAAAT |
|
Position: -64
Score: 4.6 Sequence: AAAAATCAGAAAATT
Locus tag: BcerKBAB4_3785
|
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| BcerKBAB4_3785 | -64 | 4.6 | AAAAATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ykzI | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus cereus ATCC 14579 | BC3959 | -74 | 4.6 | AAAAATCAGAAAATT |
|
Position: -70
Score: 4.5 Sequence: AATTTATTGATAATT
Locus tag: BcerKBAB4_3902
|
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| BcerKBAB4_3902 | -70 | 4.5 | AATTTATTGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH3439 | ||||
| Ortholog function: Sodium/proline symporter | ||||
| Bacillus licheniformis DSM 13 | BLi03425 | -56 | 5 | AATTATTAGAAAATT |
| Anoxybacillus flavithermus WK1 | Aflv_2428 | -166 | 4.5 | ATTTTTTAAAATATT |
| Bacillus cereus ATCC 14579 | BC4071 | -70 | 4.5 | AATTTATTGATAATT |
| Bacillus halodurans C-125 | BH3439 | -240 | 4.5 | AATTTTCGAAAAATA |
| -62 | 5 | AATTTTCTGAATATA | ||
| Bacillus clausii KSM-K16 | ABC1961 | -101 | 4.6 | TTTTTTCAGAAAATA |
|
Position: -91
Score: 4.3 Sequence: TTTTATCTGAAAATA
Locus tag: BcerKBAB4_3968
|
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| BcerKBAB4_3968 | -91 | 4.3 | TTTTATCTGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqjP | ||||
| Ortholog function: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0983 | -117 | 4.6 | TATTTTCTGAATTTT |
| -108 | 4.4 | AATTTTTTAATAAAT | ||
| Bacillus cereus ATCC 14579 | BC4133 | -90 | 4.3 | TTTTATCTGAAAATA |
|
Position: -13
Score: 4.7 Sequence: AATTTTCACACAATT
Locus tag: BcerKBAB4_4023
|
||||
| BcerKBAB4_4023 | -13 | 4.7 | AATTTTCACACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spo0A | ||||
| Ortholog function: Stage 0 sporulation two-component response regulator (Spo0A) | ||||
| Bacillus pumilus SAFR-032 | BPUM_2154 | -111 | 4.4 | ATTATTCGGAAAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0953 | -120 | 4.6 | TATTTTATGAAAAAT |
| Geobacillus kaustophilus HTA426 | GK2387 | -96 | 4.7 | TATTTTTTGAAAAAT |
| Bacillus cereus ATCC 14579 | BC4170 | -84 | 4.7 | AATTTTCACACAATT |
| Bacillus halodurans C-125 | BH2773 | -89 | 5 | AATTTTTTTAAAATT |
|
Position: -340
Score: 4.6 Sequence: AATTTTTTATAAATT
Position: -339
Score: 4.2 Sequence: ATTTTTTATAAATTT
Locus tag: BcerKBAB4_4110
|
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| BcerKBAB4_4110 | -340 | 4.6 | AATTTTTTATAAATT | |
| -339 | 4.2 | ATTTTTTATAAATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metI | ||||
| Ortholog function: Cystathionine gamma-synthase (EC 2.5.1.48) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11870 | -297 | 4.6 | AATTATTAGAAATTT |
| -214 | 4.3 | AACAATCAGAAAATT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_011930 | -314 | 4.6 | AATTATTAGAAATTT |
| Bacillus pumilus SAFR-032 | BPUM_1119 | -297 | 4.4 | AAAATACAGAAAATT |
| -287 | 4.1 | AAATTTCAATTAATT | ||
| Bacillus licheniformis DSM 13 | BLi01289 | -164 | 4 | AACAATCAGAATATT |
| Anoxybacillus flavithermus WK1 | Aflv_2067 | -228 | 4.4 | ATTTTTCGGAAAATA |
| -200 | 4.6 | AAAAATCAGAAAATT | ||
| Geobacillus kaustophilus HTA426 | GK0866 | -341 | 4.5 | AAATTTAAAAAAATT |
| Bacillus cereus ATCC 14579 | BC4253 | -344 | 4.4 | AATTTTTTAATAAAT |
| Paenibacillus sp. JDR-2 | Pjdr2_4798 | -6 | 4.4 | AACTTTATGAAAATT |
|
Position: -109
Score: 4.6 Sequence: AATATTTTGAATAAT
Locus tag: BcerKBAB4_4346
|
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| BcerKBAB4_4346 | -109 | 4.6 | AATATTTTGAATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase, cytochrome b subunit | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025520 | -98 | 4.5 | AATTGTCAATAAATT |
| Bacillus pumilus SAFR-032 | BPUM_2503 | -161 | 4.5 | AAATTTCGGAAAATT |
| -94 | 4.5 | AATTGTCAATAAATT | ||
| Bacillus licheniformis DSM 13 | BLi02994 | -184 | 4.5 | AATTTTCAAAAATAT |
| -165 | 4.9 | AAATTTTAGAAAATT | ||
|
Position: -204
Score: 4.6 Sequence: ATTATTCAAAATATT
Locus tag: BcerKBAB4_4347
|
||||
| BcerKBAB4_4347 | -204 | 4.6 | ATTATTCAAAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yslB | ||||
| Ortholog function: Predicted hydrocarbon binding protein (V4R domain) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025530 | -213 | 4.5 | AATTTATTGACAATT |
| Bacillus pumilus SAFR-032 | BPUM_2504 | -201 | 4.5 | AATTTATTGACAATT |
| -134 | 4.5 | AATTTTCCGAAATTT | ||
| Bacillus licheniformis DSM 13 | BLi02995 | -151 | 4.9 | AATTTTCTAAAATTT |
| -132 | 4.5 | ATATTTTTGAAAATT | ||
|
Position: -96
Score: 4.1 Sequence: AATGATTAGAATATT
Locus tag: BcerKBAB4_4423
|
||||
| BcerKBAB4_4423 | -96 | 4.1 | AATGATTAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: icd | ||||
| Ortholog function: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29130 | -224 | 4.3 | AAATGTCTGATTATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026170 | -224 | 4.2 | ATTAATCAGATTATT |
| Bacillus pumilus SAFR-032 | BPUM_2555 | -210 | 4.3 | AAATGTCTGATTATT |
| Bacillus licheniformis DSM 13 | BLi03061 | -225 | 4.5 | AAATGTCTGATAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0505 | -209 | 4.3 | AAAAGTCTGATAATT |
| Geobacillus kaustophilus HTA426 | GK2735 | -201 | 4.3 | AAAAGTCTGATAATT |
| Oceanobacillus iheyensis HTE831 | OB2167 | -222 | 4.3 | AAATATTAAAAAATT |
|
Position: -109
Score: 4.4 Sequence: AATTGTTTGAAAAAA
Locus tag: BcerKBAB4_4460
|
||||
| BcerKBAB4_4460 | -109 | 4.4 | AATTGTTTGAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: Argininosuccinate synthase (EC 6.3.4.5) | ||||
| Bacillus cereus ATCC 14579 | BC4630 | -108 | 4.4 | AATTGTTTGAAAAAA |
| Oceanobacillus iheyensis HTE831 | OB3129 | -101 | 4.4 | AATAATCAGAAAAAA |
|
Position: -210
Score: 4 Sequence: ATTTTTTTGAAATCT
Locus tag: BcerKBAB4_4468
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| BcerKBAB4_4468 | -210 | 4 | ATTTTTTTGAAATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackA | ||||
| Ortholog function: Acetate kinase (EC 2.7.2.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29470 | -182 | 4 | atgTgTCtGAaAata |
| Bacillus amyloliquefaciens FZB42 | RBAM_026400 | -172 | 4.6 | ATTTATCAGAAAATA |
| Bacillus pumilus SAFR-032 | BPUM_2579 | -206 | 4.7 | ATTATTCAGAAAATA |
| Bacillus licheniformis DSM 13 | BLi03086 | -194 | 4.8 | TATATTCAGAAAATA |
|
Position: -58
Score: 5 Sequence: AATTTACTGAAAATT
Locus tag: BcerKBAB4_4476
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| BcerKBAB4_4476 | -58 | 5 | AATTTACTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytcI | ||||
| Ortholog function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases | ||||
| Bacillus pumilus SAFR-032 | BPUM_2600 | -158 | 4.6 | AATAGTTTGAATATT |
| Bacillus cereus ATCC 14579 | BC4645 | -58 | 4.7 | AATTAACTGAAAATT |
| Oceanobacillus iheyensis HTE831 | OB2643 | -96 | 4.5 | TATAATCAGAATATT |
|
Position: -141
Score: 4.5 Sequence: TTATTTCAGAAAATT
Locus tag: BcerKBAB4_4835
|
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| BcerKBAB4_4835 | -141 | 4.5 | TTATTTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadN | ||||
| Ortholog function: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_029920 | -132 | 4.5 | AAATTTAAAAAAATT |
| Bacillus licheniformis DSM 13 | BLi03466 | -132 | 4.4 | AAAATTCAGAAATTT |
| Bacillus cereus ATCC 14579 | BC5004 | -141 | 4.5 | TTATTTCAGAAAATT |
| Bacillus halodurans C-125 | BH3488 | -134 | 4.8 | AATTTTCAGAAAATC |
|
Position: -123
Score: 4.9 Sequence: AATTTTATGAAAATA
Locus tag: BcerKBAB4_5180
|
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| BcerKBAB4_5180 | -123 | 4.9 | AATTTTATGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pta | ||||
| Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8) | ||||
| Bacillus cereus ATCC 14579 | BC5387 | -124 | 4.9 | AATTTTATGAAAATA |
| Bacillus halodurans C-125 | BH3823 | -114 | 4.6 | AATTTTATAAAAAAT |
|
Position: -90
Score: 4.6 Sequence: ATTTTTCTTAATATT
Locus tag: BcerKBAB4_5197
|
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| BcerKBAB4_5197 | -90 | 4.6 | ATTTTTCTTAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hom | ||||
| Ortholog function: Homoserine dehydrogenase (EC 1.1.1.3) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32260 | -183 | 4.5 | AATAATTAGAAAATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_029370 | -185 | 4.8 | AATATTTAGAAAATA |
| Bacillus pumilus SAFR-032 | BPUM_2888 | -185 | 4.8 | AATATTTTGAAAATA |
| Anoxybacillus flavithermus WK1 | Aflv_2414 | -88 | 4.7 | TTTTTTTAGAAAATT |