Propagation of Fnr regulog to Buchnera aphidicola str. Bp (Baizongia pistaciae)

Reference regulog properties
Source regulog:	Fnr - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator (repressor)
Biological process:	Energy metabolism; Anaerobic metabolism
Effector:	Oxygen
Phylum:	Gammaproteobacteria
Propagated regulon:
Target genome	Buchnera aphidicola str. Bp (Baizongia pistaciae)
Orthologous TF(s)	No orthologous TFs found
Regulated genes	19

Built upon 685 sites [see more]

Predicted regulatory interactions in *Buchnera aphidicola str. Bp (Baizongia pistaciae)*
	Locus tag	Position	Score	Sequence
Position: -195 Score: 4.8 Sequence: TTGAAATAAATCAA Position: -150 Score: 3.6 Sequence: TTTTTAAATATCAT Position: -80 Score: 3.6 Sequence: TTTTTATATATTAA Locus tag: bbp002
	bbp002	-195	4.8	TTGAAATAAATCAA
		-150	3.6	TTTTTAAATATCAT
		-80	3.6	TTTTTATATATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpB
Ortholog function: ATP synthase A chain (EC 3.6.3.14)
Citrobacter koseri ATCC BAA-895	CKO_00078	-122	4.2	TTGTTTGAAATCAC
Enterobacter sp. 638	Ent638_4126	-292	3.7	TTGATTAATATGAC
Erwinia amylovora ATCC 49946	EAM_3480	-124	3.9	TCGATTGAAATCAC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4518	-191	3.7	ATGATTGTTAGCAA
Escherichia coli str. K-12 substr. MG1655	b3738	-123	4.2	TTGTTTGAAATCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04143	-122	4.2	TTGTTTGAAATCAC
Photorhabdus luminescens subsp. laumondii TTO1	plu0046	-225	3.9	ATTATTAAAAACAA
Proteus mirabilis HI4320	PMI3058	-130	4
Salmonella typhimurium LT2	STM3871	-122	4.2	TTGTTTGAAATCAC

Position: -170 Score: 3.8 Sequence: TTTTTTTTAATCAT Position: -167 Score: 3.8 Sequence: TTTTTAATCATCAA Locus tag: bbp143
	bbp143	-170	3.8	TTTTTTTTAATCAT
		-167	3.8	TTTTTAATCATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoA
Ortholog function: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00508	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2385	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2288	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02678	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3089	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2328	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3308	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1630	-465	3.6	TTTTATTAAAACAA

Position: 31 Score: 4.1 Sequence: CTGATGATGATCAA Locus tag: bbp144
	bbp144	31	4.1	CTGATGATGATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoB
Ortholog function: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00509	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2384	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2287	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02677	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3088	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2327	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3307	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1631	-465	3.6	TTTTATTAAAACAA

Position: -46 Score: 4.1 Sequence: TTGATATTTAAAAA Locus tag: bbp145
	bbp145	-46	4.1	TTGATATTTAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoD
Ortholog function: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00510	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2383	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2286	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02676	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3087	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2326	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3306	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1632	-465	3.6	TTTTATTAAAACAA

Position: -47 Score: 4.7 Sequence: TTGATCTTGAACAA Locus tag: bbp148
	bbp148	-47	4.7	TTGATCTTGAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoG
Ortholog function: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00513	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2380	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2283	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02673	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3084	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2323.S	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3303	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1635	-465	3.6	TTTTATTAAAACAA

Position: -31 Score: 3.9 Sequence: TTTTTATTAAACAA Locus tag: bbp154
	bbp154	-31	3.9	TTTTTATTAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoM
Ortholog function: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00519	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2374	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2277	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02667	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3078	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2317	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3297	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1641	-465	3.6	TTTTATTAAAACAA

Position: -131 Score: 4.2 Sequence: TTACTATAAATCAA Locus tag: bbp178
	bbp178	-131	4.2	TTACTATAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1)
Enterobacter sp. 638	Ent638_4063	-132	3.6	ATGATACAAAAAAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0092	-143	3.5	ATGAAGTAAAGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04217	-146	4.2	TTGTTCTACATCAC
Photorhabdus luminescens subsp. laumondii TTO1	plu0075	-346	3.6	TTATGTCAAATCAA
Proteus mirabilis HI4320	PMI3036	-164	3.8	TTTATTTAAAATAA
		-85	4	ATGATTTTCATTAA

Position: -67 Score: 4.1 Sequence: TTATTTAACATCAA Position: -6 Score: 3.8 Sequence: ATTATTATGATCAA Locus tag: bbp284
	bbp284	-67	4.1	TTATTTAACATCAA
		-6	3.8	ATTATTATGATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfkA
Ortholog function: 6-phosphofructokinase (EC 2.7.1.11)
Citrobacter koseri ATCC BAA-895	CKO_03085	-132	4	CTGACCTGAATCAA
Edwardsiella tarda EIB202	ETAE_3450	-223	4	CTGACCTGAATCAA
Enterobacter sp. 638	Ent638_4056	-174	4	CTGACCTGAATCAA
Erwinia amylovora ATCC 49946	EAM_0103	-31	4	ATTATTTGCATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4307	-140	4	CTGACCTGAATCAA
Escherichia coli str. K-12 substr. MG1655	b3916	-125	4	CTGACCTGAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04223	-123	4	CTGACCTGAATCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu4774	-203	4.1	TTGATCTCAAAAAA
Proteus mirabilis HI4320	PMI3203	-194	3.7	TTAATGCGCATCAA
Salmonella typhimurium LT2	STM4062	-126	4	CTGACCTGAATCAA
Serratia proteamaculans 568	Spro_4807	-145	4.1	GTGACTTGAATCAA
Yersinia pestis KIM	y0059	-148	4.2	CTGACTTGAATCAA

Position: -35 Score: 3.9 Sequence: TTGTGATAAATAAA Position: -33 Score: 3.4 Sequence: GTGATAAATAAAAA Position: -5 Score: 3.6 Sequence: ATGATATGAAAAAA Locus tag: bbp415
	bbp415	-35	3.9	TTGTGATAAATAAA
		-33	3.4	GTGATAAATAAAAA
		-5	3.6	ATGATATGAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoC
Ortholog function: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Citrobacter koseri ATCC BAA-895	CKO_02731	-267	3.7	TTGTTGATAATTAA
Erwinia amylovora ATCC 49946	EAM_0983	-207	3.7	GTTATTTAAATCAG
Escherichia coli str. K-12 substr. MG1655	b0430	-241	3.7	TTGTTTTATTTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00392	-49	3.7	TTGAGGTCGTTCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu3877	-336	3.8	TTGTGAGCTATCAA
Proteus mirabilis HI4320	PMI0106	9	3.6	ATGAAATACATAAA
Salmonella typhimurium LT2	STM0441	-268	3.4	TTTATTGATAATAA
Serratia proteamaculans 568	Spro_1088	-293	3.6	TTCTTTTACATTAA
Yersinia pestis KIM	y1019	-223	3.5	TTGTTTTTCCTTAA

Position: -47 Score: 3.5 Sequence: TTAATTTATCTAAA Position: -43 Score: 3.5 Sequence: TTTATCTAAATAAG Locus tag: bbp416
	bbp416	-47	3.5	TTAATTTATCTAAA
		-43	3.5	TTTATCTAAATAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoB
Ortholog function: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Citrobacter koseri ATCC BAA-895	CKO_02730	-267	3.7	TTGTTGATAATTAA
Erwinia amylovora ATCC 49946	EAM_0984	-207	3.7	GTTATTTAAATCAG
Escherichia coli str. K-12 substr. MG1655	b0431	-241	3.7	TTGTTTTATTTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00393	-49	3.7	TTGAGGTCGTTCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu3876	-336	3.8	TTGTGAGCTATCAA
Proteus mirabilis HI4320	PMI0107	9	3.6	ATGAAATACATAAA
Salmonella typhimurium LT2	STM0442	-268	3.4	TTTATTGATAATAA
Serratia proteamaculans 568	Spro_1089	-293	3.6	TTCTTTTACATTAA
Yersinia pestis KIM	y1020	-223	3.5	TTGTTTTTCCTTAA

Position: -51 Score: 3.7 Sequence: TTGTTATAGATAAT Locus tag: bbp531
	bbp531	-51	3.7	TTGTTATAGATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pitA
Ortholog function: Phosphate transporter, low-affinity
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0048	-140	4	TTGATTTATATTGA
Escherichia coli str. K-12 substr. MG1655	b3493	-116	3.8	TTGAGTGAAATCCA
Salmonella typhimurium LT2	STM3589	-116	4.2	GTGATATCAAACAA
Yersinia pestis KIM	y3862	-201	4.1	TTGAATAAAATCAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fnr regulog to Buchnera aphidicola str. Bp (Baizongia pistaciae)

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --