Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FucR regulog to Citrobacter koseri ATCC BAA-895

Reference regulog properties
Source regulog: FucR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: activator
Biological process: Fucose utilization
Effector: L-fuculose-1-phosphate
Phylum: Proteobacteria
Propagated regulon:
Target genome Citrobacter koseri ATCC BAA-895
Orthologous TF(s) CKO_04166
Regulated genes 3
Built upon 16 sites [see more]
Predicted regulatory interactions in Citrobacter koseri ATCC BAA-895
Locus tag Position Score Sequence
Position: -218
Score: 6.4
Sequence: TTGCCCGTTTGCGGAAATTTACGCTCAAACGGGCAA
Locus tag: CKO_01448
CKO_01448 -218 6.4 TTGCCCGTTTGCGGAAATTTACGCTCAAACGGGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aldA
Ortholog function: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)
Citrobacter koseri ATCC BAA-895 CKO_01448 -218 6.4 TTGCCCGTTTGCGGAAATTTACGCTCAAACGGGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01501 -218 6.2 ATGCCCGTTTACGGCAGATTCGTCGCAAACGGGCAA
Position: -281
Score: 7.6
Sequence: ATGACCGATTTAATTTATTACTGCGAAAACGGGCAT
Locus tag: CKO_04159
CKO_04159 -281 7.6 ATGACCGATTTAATTTATTACTGCGAAAACGGGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fucA
Ortholog function: L-fuculose phosphate aldolase (EC 4.1.2.17)
Citrobacter koseri ATCC BAA-895 CKO_04159 -281 7.6 ATGACCGATTTAATTTATTACTGCGAAAACGGGCAT
-225 6 ATGCCCGTTTGGATAAATAATATTAAGAGCGGTCAT
Edwardsiella tarda EIB202 ETAE_0293 -312 6.8 ATGACCGAATAGGCATTTTTTATTTTAAACGGTCAA
Escherichia coli str. K-12 substr. MG1655 b2800 -284 7.3 ATGACCGTATTAATTGTTTGTGCCGAAAACGGTCAT
-225 6.3 ATGACCGTTTTGATAAATATTTTTAAGAGCGGTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03151 -290 7 ATGACCGAATGAATATATATCGTGGAAAACGGGCAA
-236 5.6 ATGCCCGCTTGATGAAATATTATTAAGAACGGGCAT
Salmonella typhimurium LT2 STM2974 -293 7.1 ATGCCCGAATTAAATTATTGCCACGAAAACGGGCAG
-237 6.2 TTGCCCGTTTTAAAAAATATTATTAAGAGCGGGCAT
Position: -310
Score: 7.6
Sequence: ATGCCCGTTTTCGCAGTAATAAATTAAATCGGTCAT
Locus tag: CKO_04160
CKO_04160 -310 7.6 ATGCCCGTTTTCGCAGTAATAAATTAAATCGGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fucP
Ortholog function: L-fucose transporter
Citrobacter koseri ATCC BAA-895 CKO_04160 -366 6 ATGACCGCTCTTAATATTATTTATCCAAACGGGCAT
-310 7.6 ATGCCCGTTTTCGCAGTAATAAATTAAATCGGTCAT
Escherichia coli str. K-12 substr. MG1655 b2801 -357 6.3 ATGACCGCTCTTAAAAATATTTATCAAAACGGTCAT
-298 7.3 ATGACCGTTTTCGGCACAAACAATTAATACGGTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03152 -351 7 TTGCCCGTTTTCCACGATATATATTCATTCGGTCAT