Regulog FucR - Enterobacteriales

Properties
Regulator type:	Transcription factor
Regulator family:	DeoR
Regulation mode:	activator
Biological process:	Fucose utilization
Effector:	L-fuculose-1-phosphate
Phylum:	Proteobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 16 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - DeoR
By effector - L-fuculose-1-phosphate
By pathway - Fucose utilization

Statistics of regulated genes
Genome	Genes	Operons
Citrobacter koseri ATCC BAA-895	6	3
Edwardsiella tarda EIB202	2	1
Enterobacter sp. 638
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043
Escherichia coli str. K-12 substr. MG1655	7	2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	8	3
Photorhabdus luminescens subsp. laumondii TTO1
Proteus mirabilis HI4320
Salmonella typhimurium LT2	2	1
Serratia proteamaculans 568
Yersinia pestis KIM

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
aldA	* Citrobacter koseri ATCC BAA-895 Site: position = -218 score = 6.36956 sequence = TTGCCCGTTTGCGGAAATTTACGCTCAAACGGGCAA Gene: CKO_01448: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_1953: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0118: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)	Escherichia coli str. K-12 substr. MG1655 Gene: b1415: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -218 score = 6.23944 sequence = ATGCCCGTTTACGGCAGATTCGTCGCAAACGGGCAA Gene: KPN_01501: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)

CRON 2.
fucA	* Citrobacter koseri ATCC BAA-895 Site: position = -225 score = 5.95737 sequence = ATGCCCGTTTGGATAAATAATATTAAGAGCGGTCAT Site: position = -281 score = 7.56037 sequence = ATGACCGATTTAATTTATTACTGCGAAAACGGGCAT Gene: CKO_04159: L-fuculose phosphate aldolase (EC 4.1.2.17)	* Edwardsiella tarda EIB202 Site: position = -312 score = 6.77732 sequence = ATGACCGAATAGGCATTTTTTATTTTAAACGGTCAA Gene: ETAE_0293: L-fuculose phosphate aldolase (EC 4.1.2.17)	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	* Escherichia coli str. K-12 substr. MG1655 Site: position = -284 score = 7.28199 sequence = ATGACCGTATTAATTGTTTGTGCCGAAAACGGTCAT Site: position = -225 score = 6.28331 sequence = ATGACCGTTTTGATAAATATTTTTAAGAGCGGTCAT Gene: b2800: L-fuculose phosphate aldolase (EC 4.1.2.17)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -290 score = 7.02013 sequence = ATGACCGAATGAATATATATCGTGGAAAACGGGCAA Site: position = -236 score = 5.63669 sequence = ATGCCCGCTTGATGAAATATTATTAAGAACGGGCAT Gene: KPN_03151: L-fuculose phosphate aldolase (EC 4.1.2.17)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	* Salmonella typhimurium LT2 Site: position = -293 score = 7.08218 sequence = ATGCCCGAATTAAATTATTGCCACGAAAACGGGCAG Site: position = -237 score = 6.20421 sequence = TTGCCCGTTTTAAAAAATATTATTAAGAGCGGGCAT Gene: STM2974: L-fuculose phosphate aldolase (EC 4.1.2.17)	Serratia proteamaculans 568	Yersinia pestis KIM	L-fuculose phosphate aldolase (EC 4.1.2.17)
fucO	Citrobacter koseri ATCC BAA-895 Gene: CKO_04157: Lactaldehyde reductase (EC 1.1.1.77)	Edwardsiella tarda EIB202 Gene: ETAE_0294: Lactaldehyde reductase (EC 1.1.1.77)	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2799: Lactaldehyde reductase (EC 1.1.1.77)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03150: Lactaldehyde reductase (EC 1.1.1.77)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2973: Lactaldehyde reductase (EC 1.1.1.77)	Serratia proteamaculans 568	Yersinia pestis KIM	Lactaldehyde reductase (EC 1.1.1.77)

CRON 3.
fucP	* Citrobacter koseri ATCC BAA-895 Site: position = -310 score = 7.56037 sequence = ATGCCCGTTTTCGCAGTAATAAATTAAATCGGTCAT Site: position = -366 score = 5.95737 sequence = ATGACCGCTCTTAATATTATTTATCCAAACGGGCAT Gene: CKO_04160: L-fucose transporter	Edwardsiella tarda EIB202 Gene: ETAE_0291: L-fucose transporter	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	* Escherichia coli str. K-12 substr. MG1655 Site: position = -357 score = 6.28331 sequence = ATGACCGCTCTTAAAAATATTTATCAAAACGGTCAT Site: position = -298 score = 7.28199 sequence = ATGACCGTTTTCGGCACAAACAATTAATACGGTCAT Gene: b2801: L-fucose transporter	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -351 score = 7.02013 sequence = TTGCCCGTTTTCCACGATATATATTCATTCGGTCAT Gene: KPN_03152: L-fucose transporter	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	L-fucose transporter
fucI	Citrobacter koseri ATCC BAA-895 Gene: CKO_04161: L-fucose isomerase (EC 5.3.1.25)	Edwardsiella tarda EIB202 Gene: ETAE_0290: L-fucose isomerase (EC 5.3.1.25)	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2802: L-fucose isomerase (EC 5.3.1.25)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03153: L-fucose isomerase (EC 5.3.1.25)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2976: L-fucose isomerase (EC 5.3.1.25)	Serratia proteamaculans 568	Yersinia pestis KIM	L-fucose isomerase (EC 5.3.1.25)
fucK	Citrobacter koseri ATCC BAA-895 Gene: CKO_04163: L-fuculokinase (EC 2.7.1.51)	Edwardsiella tarda EIB202 Gene: ETAE_0289: L-fuculokinase (EC 2.7.1.51)	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2803: L-fuculokinase (EC 2.7.1.51)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03154: L-fuculokinase (EC 2.7.1.51)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2977: L-fuculokinase (EC 2.7.1.51)	Serratia proteamaculans 568	Yersinia pestis KIM	L-fuculokinase (EC 2.7.1.51)
fucU	Citrobacter koseri ATCC BAA-895 Gene: CKO_04165: L-fucose mutarotase	Edwardsiella tarda EIB202 Gene: ETAE_0288: L-fucose mutarotase	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2804: L-fucose mutarotase	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03155: L-fucose mutarotase	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2978: L-fucose mutarotase	Serratia proteamaculans 568	Yersinia pestis KIM	L-fucose mutarotase
fucR	Citrobacter koseri ATCC BAA-895 Gene: CKO_04166: L-fucose operon activator	Edwardsiella tarda EIB202 Gene: ETAE_0287: L-fucose operon activator	Enterobacter sp. 638 Gene: Ent638_3405: L-fucose operon activator	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2805: L-fucose operon activator	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03156: L-fucose operon activator	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu4112: L-fucose operon activator	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2979: L-fucose operon activator	Serratia proteamaculans 568	Yersinia pestis KIM	L-fucose operon activator
CKO_04162	Citrobacter koseri ATCC BAA-895 Gene: CKO_04162: hypothetical protein	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog FucR - Enterobacteriales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --