Regulon of FucR in Citrobacter koseri ATCC BAA-895
| Regulator type: | Transcription factor |
| TF locus tag: | CKO_04166 |
| Regulator family: | DeoR |
| Regulation mode: | activator |
| Biological process: | Fucose utilization |
| Effector: | L-fuculose-1-phosphate |
| Regulog: | FucR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - DeoR
- By effector - L-fuculose-1-phosphate
- By pathway - Fucose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -218
Score: 6.4 Sequence: TTGCCCGTTTGCGGAAATTTACGCTCAAACGGGCAA
Locus tag: CKO_01448
Name: aldA Funciton: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) |
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aldA
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Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)
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Position: -281
Score: 7.6 Sequence: ATGACCGATTTAATTTATTACTGCGAAAACGGGCAT
Position: -225
Score: 6 Sequence: ATGCCCGTTTGGATAAATAATATTAAGAGCGGTCAT
Locus tag: CKO_04159
Name: fucA Funciton: L-fuculose phosphate aldolase (EC 4.1.2.17) |
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fucA
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L-fuculose phosphate aldolase (EC 4.1.2.17)
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Position: -366
Score: 6 Sequence: ATGACCGCTCTTAATATTATTTATCCAAACGGGCAT
Position: -310
Score: 7.6 Sequence: ATGCCCGTTTTCGCAGTAATAAATTAAATCGGTCAT
Locus tag: CKO_04160
Name: fucP Funciton: L-fucose transporter
Locus tag: CKO_04161
Name: fucI Funciton: L-fucose isomerase (EC 5.3.1.25)
Locus tag: CKO_04162
Name: null Funciton: hypothetical protein
Locus tag: CKO_04163
Name: fucK Funciton: L-fuculokinase (EC 2.7.1.51) |
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fucP
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L-fucose transporter
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fucI
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L-fucose isomerase (EC 5.3.1.25)
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hypothetical protein
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fucK
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L-fuculokinase (EC 2.7.1.51)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |