Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Dickeya dadantii 3937

Reference regulog properties
Source regulog: Zur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Dickeya dadantii 3937
Orthologous TF(s) null
Regulated genes 5
Built upon 65 sites [see more]
Predicted regulatory interactions in Dickeya dadantii 3937
Locus tag Position Score Sequence
Position: -181
Score: 5.5
Sequence: GGTTTGTTATAACATAACCTTTT
Position: -51
Score: 5.8
Sequence: ATTTTGTTATGTTATAACATAAC
Position: -46
Score: 5.8
Sequence: GTTATGTTATAACATAACAAAAT
Locus tag: null
null -181 5.5 GGTTTGTTATAACATAACCTTTT
-51 5.8 ATTTTGTTATGTTATAACATAAC
-46 5.8 GTTATGTTATAACATAACAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA4254
Ortholog function: predicted zinc-regulated ABC transporter, ATP-binding protein
Citrobacter koseri ATCC BAA-895 CKO_00850 -29 6.1 TAATTGTTATGATATAACATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4254 -55 5.4 AATTTGGTATGTTATAACATACC
Position: -30
Score: 5.6
Sequence: GATATGTTATAACATAACAATGA
Locus tag: null
null -30 5.6 GATATGTTATAACATAACAATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmE2
Ortholog function: 50S ribosomal protein L31 paralog
Escherichia coli str. K-12 substr. MG1655 b0296 -34 5.6 TTATGGTTATGTTATAACATAAC
Salmonella typhimurium LT2 STM0469 -35 5.8 TTATTGTTATGTTATAACATAAT
Citrobacter koseri ATCC BAA-895 CKO_02696 -35 5.5 TTATTGTTACGTTATAACATAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00435 -35 5.5 TTATTGTTATGTTATAACGTAAT
Enterobacter sp. 638 Ent638_0934 -37 5.6 CTTTTGTTATGTTATAACAAAAC
Erwinia amylovora ATCC 49946 EAM_1015 -36 6 TTTTGGTTATATTATAACATATC
Yersinia pestis KIM y1048 -36 5.9 ATGATGTTACATTATAACATACT
Serratia proteamaculans 568 Spro_1125 -36 6.2 TTATTGTTATAGTATAACATTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1168 -31 6 GATATGTTATAACATAACAATTG
Proteus mirabilis HI4320 PMI3379 -38 6.5 ATATTGTTATATTATAACATTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0036 -32 6.2 GTAATGTTATATTATTACAATTT
Position: -3
Score: 6.1
Sequence: GTTATGTTATATTATAACGATAT
Locus tag: null
null -3 6.1 GTTATGTTATATTATAACGATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuC2
Ortholog function: putative zinc ABC transporter, ATP-binding protein
Citrobacter koseri ATCC BAA-895 CKO_04054 -141 6.1 TTATTGTTATGTTATAACATTTT
Citrobacter koseri ATCC BAA-895 CKO_00951 -45 5.7 CATTTGTTATGTTATAACGTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03035 -108 6 TTATTGTTATGTTATAACATTAA
Enterobacter sp. 638 Ent638_3178 -140 5.9 TTAGTGTTATGTTATAACATTAT
Serratia proteamaculans 568 Spro_1121 -185 5.8 GTGATGTTATAATGTAACACTTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3756 -123 6.5 GATATGTTATAATATAACAATTA
© 2009-2020 RegPrecise