Propagation of NsrR regulog to Shigella boydii Sb227
| Source regulog: | NsrR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shigella boydii Sb227 |
| Orthologous TF(s) | SBO_4278 |
| Regulated genes | 8 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -35
Score: 5.7 Sequence: CATGTATATTAAATATAAC
Locus tag: SBO_0806
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| SBO_0806 | -35 | 5.7 | CATGTATATTAAATATAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hcp | ||||
| Ortholog function: Hydroxylamine reductase (EC 1.7.-.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0873 | -35 | 5.7 | CATGTATATTAAATATAAC |
|
Position: -223
Score: 4.5 Sequence: ATGGTATTTAAAATGCAAA
Locus tag: SBO_1295
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| SBO_1295 | -223 | 4.5 | ATGGTATTTAAAATGCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeaR | ||||
| Ortholog function: uncharacterized protein/domain, possibly involved in tellurite resistance | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1797 | -87 | 4.5 | ATGGTATTTAAAATGCAAA |
|
Position: -249
Score: 3.7 Sequence: ATAGTCATTTTAATACAAC
Locus tag: SBO_1446
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| SBO_1446 | -249 | 3.7 | ATAGTCATTTTAATACAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: Iron binding protein SufA for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -248 | 4.1 | TAGTCATTTTCAATACAAC |
| Salmonella typhimurium LT2 | STM1369 | -248 | 3.8 | TAGTCATTTTCTATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -116 | 4 | TATGCTTATAAAAAGCACT |
| Enterobacter sp. 638 | Ent638_1760 | -249 | 3.8 | TAGGCATTATCTATACATC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -191 | 3.9 | AATAAATTAAAGATATACC |
|
Position: -47
Score: 5.4 Sequence: AATGCATTTCAAATATACT
Locus tag: SBO_1658
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| SBO_1658 | -47 | 5.4 | AATGCATTTCAAATATACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tehA | ||||
| Ortholog function: Tellurite resistance protein TehA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1429 | -47 | 5.4 | AATGCATTTCAAATATACT |
| Salmonella typhimurium LT2 | STM1609 | -35 | 5.4 | AATGCATTTCAAATATACT |
| Citrobacter koseri ATCC BAA-895 | CKO_01466 | -35 | 5.6 | AATGCATTTAAAATATACT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01941 | -47 | 5 | GGTTCCTTTAAAATGCAAC |
| Enterobacter sp. 638 | Ent638_1974 | -35 | 5.2 | CTAGCATTTCAAATATAAT |
|
Position: -47
Score: 6.1 Sequence: GATGCATTTGAAATACATC
Locus tag: SBO_2580
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| SBO_2580 | -47 | 6.1 | GATGCATTTGAAATACATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmp | ||||
| Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2552 | -47 | 5.7 | GATGCATTTGAGATACATC |
| Salmonella typhimurium LT2 | STM2556 | -79 | 4.8 | GATCCATTTACAATGCAAG |
| -47 | 5.8 | GATGCATTTGATATACATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00235 | -47 | 5.5 | GATGTATTTGACATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02877 | -47 | 6.3 | GATGCATTTAAAATGCATC |
| Enterobacter sp. 638 | Ent638_3037 | -47 | 6.2 | GATGCATATAAAATACATC |
| Yersinia pestis KIM | y1321 | -58 | 6.1 | GATGCATTTAAAATACATG |
| Serratia proteamaculans 568 | Spro_3639 | -59 | 6 | GATGCATTTAAAATGCATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3251 | -51 | 5.9 | GATTCATATAAAATACAAC |
| Edwardsiella tarda EIB202 | ETAE_2822 | -45 | 6.2 | GTTGCATTTAAAATACAAC |
| Proteus mirabilis HI4320 | PMI1868 | -61 | 5.4 | GTTGTATTAAAAATACATG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3292 | -64 | 5.4 | GTTGCATTTAAATTACATG |
|
Position: -38
Score: 4.7 Sequence: GTTGTAATATAAATACACC
Locus tag: SBO_2788
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| SBO_2788 | -38 | 4.7 | GTTGTAATATAAATACACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygbA | ||||
| Ortholog function: hypothetical protein involved in nitrosative stress | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2732 | -38 | 5.1 | GATGTAATATAAATACATC |
| Salmonella typhimurium LT2 | STM2860 | -40 | 4.4 | GGTGTAAAATAAATACACC |
| Enterobacter sp. 638 | Ent638_3209 | -39 | 4.1 | GATGTATTATTTATGCACA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2415 | -39 | 5.6 | ATTGTATTTAAAATGCATC |
| Proteus mirabilis HI4320 | PMI1959 | -215 | 3.7 | ATTGTTTGTTAAATAAAAT |
| -38 | 5.8 | AATGCATTTTAAATGCAAC | ||
|
Position: -165
Score: 4.3 Sequence: GTGGTATTTTACATGCACT
Locus tag: SBO_4101
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| SBO_4101 | -165 | 4.3 | GTGGTATTTTACATGCACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrfA | ||||
| Ortholog function: Nitrite reductase, cytochrome c(552) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4070 | -165 | 4.3 | GTGGTATTTTACATGCACT |
| -154 | 3.7 | CATGCACTTACAATTGATT | ||
| Salmonella typhimurium LT2 | STM4277 | -167 | 4.4 | GTGGTATTTTACATACACT |
| Citrobacter koseri ATCC BAA-895 | CKO_03814 | -170 | 4.3 | GTGGTATTTTACATGCACT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1875 | -125 | 4.2 | ACAATATTTCAAATGCATC |
|
Position: -47
Score: 6.2 Sequence: GATGTATTTAAAATACATC
Locus tag: SBO_4234
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| SBO_4234 | -47 | 6.2 | GATGTATTTAAAATACATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dnrN | ||||
| Ortholog function: Nitric oxide-dependent regulator DnrN or NorA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4209 | -47 | 6.4 | GATGCATTTAAAATACATC |
| Salmonella typhimurium LT2 | STM4399 | -47 | 6.4 | GATGCATTTAAAATACAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_03623 | -47 | 6.2 | GATGTATTTAAAATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04602 | -47 | 6.4 | GATGCATTTAAAATACATC |
| Enterobacter sp. 638 | Ent638_0379 | -48 | 5.8 | GATGCATTTAATATGCACC |
| Yersinia pestis KIM | y0652 | -77 | 5.1 | CATGCATTTATTATGCATG |
| -53 | 4.8 | GGTGTATAATAAATACATG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3606 | -50 | 6 | GATGCATTTAAAATGCAAT |
| Edwardsiella tarda EIB202 | ETAE_0372 | -47 | 5.7 | ATTGCATTTAAAATACACC |