Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TnrA regulog to Bacillus coahuilensis m4-4

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus coahuilensis m4-4
Orthologous TF(s) No orthologous TFs found
Regulated genes 15
Built upon 304 sites [see more]
Predicted regulatory interactions in Bacillus coahuilensis m4-4
Locus tag Position Score Sequence
Position: -124
Score: 4.8
Sequence: TGTTAACTTTTCTAACA
Position: -55
Score: 5
Sequence: TGATATAAAATATAACA
Position: -32
Score: 4.8
Sequence: TGTTAGAAAAACTAACG
Locus tag: Bcoam_010100005735
Bcoam_010100005735 -124 4.8 TGTTAACTTTTCTAACA
-55 5 TGATATAAAATATAACA
-32 4.8 TGTTAGAAAAACTAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgB2
Ortholog function: Nitrogen regulatory protein P-II
Bacillus licheniformis DSM 13 BLi01176 -172 4.3 TGTTATAAAACTTAACG
-59 3.9 TGATAAGAAACATAACA
-37 4.6 CGTAATATAACCTTACA
Oceanobacillus iheyensis HTE831 OB1212 -60 3.4 TGATAATTTACATAACC
-38 5.2 TGTTAGGAAATCTAACA
-31 3.7 TTTTATAAATTATAAAG
Position: -86
Score: 5.1
Sequence: TGTTATATTTCCTAACA
Position: -63
Score: 5.1
Sequence: TGACATATTTTCTAACA
Locus tag: Bcoam_010100009765
Bcoam_010100009765 -86 5.1 TGTTATATTTCCTAACA
-63 5.1 TGACATATTTTCTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU17450 -82 4.3 TGTTAAGAATCCTTACA
-59 5 TGACACATAATATAACA
Bacillus amyloliquefaciens FZB42 RBAM_017250 -82 4.3 TGTTAAGATTCCTTACA
-59 4.9 TGACACAAAATATAACA
Bacillus pumilus SAFR-032 BPUM_1636 -82 4.4 TGTTAATATTCCTAACA
-59 5.1 TGACATATAATATAACA
-54 4.2 TATAATATAACATGACA
Bacillus licheniformis DSM 13 BLi01992 -81 4.2 TGTAAAGAATCCTTACA
-58 5 TGACACATTATATAACA
Anoxybacillus flavithermus WK1 Aflv_1508 -82 4.7 TGTGATAAAATGTAACG
-59 4.3 TGACATATAAGTTAACA
Position: -188
Score: 4.3
Sequence: TGTCATAAAATCTTAAC
Locus tag: Bcoam_010100016830
Bcoam_010100016830 -188 4.3 TGTCATAAAATCTTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yumC
Ortholog function: Thioredoxin reductase (EC 1.8.1.9)
Bacillus subtilis subsp. subtilis str. 168 BSU32110 -43 4.6 TGGTATAATTAATAACA
Bacillus amyloliquefaciens FZB42 RBAM_029160 -229 3.9 TGAAATGAAATATAAAA
-42 4.9 TGTTATAATTAATAACA
Bacillus halodurans C-125 BH3408 -277 4.3 TGGCAAAAAAAGTGACA
-125 4.3 TGACAGATTTATTTACA
© 2009-2020 RegPrecise