Propagation of GntR regulog to Shigella flexneri 5 str. 8401
| Source regulog: | GntR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shigella flexneri 5 str. 8401 |
| Orthologous TF(s) | SFV_3446 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -212
Score: 6.3 Sequence: TTATTTTACCGGTAACATGA
Locus tag: SFV_1853
|
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| SFV_1853 | -212 | 6.3 | TTATTTTACCGGTAACATGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: edd | ||||
| Ortholog function: 6-phosphogluconate dehydratase (EC 4.2.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1851 | -212 | 6.3 | TTATTTTACCGGTAACATGA |
| Salmonella typhimurium LT2 | STM1885 | -212 | 6.1 | GTATTTTACCGGTAACATGA |
| Citrobacter koseri ATCC BAA-895 | CKO_01115 | -211 | 6.3 | TTATTTTACCGGTAACATGA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02366 | -211 | 6.3 | TTATTTTACCGGTAACATGA |
| -2 | 5.4 | CAATGTTACGGGTAACAAAT | ||
| Enterobacter sp. 638 | Ent638_2420 | -210 | 6.3 | TTATTTTACCGGTAACATGA |
| Serratia proteamaculans 568 | Spro_4499 | -73 | 6.4 | CAATGTTACCGATAACATGT |
| -59 | 5.5 | ACATGTTACCGGTAACAAAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1836 | -359 | 5.9 | CATTGTTACCGGTATCATTT |
| Proteus mirabilis HI4320 | PMI2760 | -111 | 5.1 | GCTTGTTACCCGTAACAATG |
| -96 | 6.4 | CAATGTTACCGGTAACAAGT | ||
|
Position: -178
Score: 6.1 Sequence: AAATGTTACCCGTATCATTC
Locus tag: SFV_3423
|
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| SFV_3423 | -178 | 6.1 | AAATGTTACCCGTATCATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntT | ||||
| Ortholog function: High-affinity H+/gluconate symporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3415 | -178 | 5.9 | AGATGTTACCCGTATCATTC |
| -37 | 4.9 | TGACGTTACCCATAACAAAT | ||
| Salmonella typhimurium LT2 | STM3512 | -178 | 6 | ATATGTTACCCGTATCATTC |
| -37 | 4.7 | TGACGTTACCCATAACAAAG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04836 | -178 | 6 | ATATGTTACCCGTATCATTC |
| -37 | 4.9 | CGACGTTACCCATAACAAAT | ||