Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PerR regulog to Bacillus coahuilensis m4-4

Reference regulog properties
Source regulog: PerR - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Oxidative stress response; Peroxide stress response
Effector: Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus coahuilensis m4-4
Orthologous TF(s) Bcoam_010100003830
Regulated genes 4
Built upon 129 sites [see more]
Predicted regulatory interactions in Bacillus coahuilensis m4-4
Locus tag Position Score Sequence
Position: -63
Score: 4.1
Sequence: GTACACTAATTATAA
Position: -54
Score: 5.5
Sequence: TTATAAATATTATAA
Position: -40
Score: 4.1
Sequence: ATGTAATAATCATAA
Locus tag: Bcoam_010100003830
Bcoam_010100003830 -63 4.1 GTACACTAATTATAA
-54 5.5 TTATAAATATTATAA
-40 4.1 ATGTAATAATCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: Transcriptional regulator of peroxide stress response, Fur family
Bacillus subtilis subsp. subtilis str. 168 BSU08730 -51 5 TTATAAACATTACAA
-34 4.2 TAAGAATTTTTTTTA
Bacillus amyloliquefaciens FZB42 RBAM_008820 -51 5.4 TTATAAACATTATAA
-34 4.4 TAATAATCTTTTTTA
Bacillus pumilus SAFR-032 BPUM_0827 -50 5.4 TTATAAAGATTATAA
Bacillus licheniformis DSM 13 BLi00900 -50 4.9 TTATAAACGTTATAA
-33 4.2 TAAGAATTTTTTTTA
Anoxybacillus flavithermus WK1 Aflv_0369 -38 5.5 TTATAAAAATTATAA
-15 5.5 TTATAATTTTTATAA
Geobacillus kaustophilus HTA426 GK0478 -61 5.5 TTATAAATATTATAA
-44 4.2 TGATAATTTTTTTCA
Bacillus cereus ATCC 14579 BC0518 -43 5.4 TTATAAGAATTATAA
Bacillus halodurans C-125 BH0951 -54 5.4 TTATAAAGATTATAA
Bacillus clausii KSM-K16 ABC1322 -50 5.2 TTATAATTAATATAA
Oceanobacillus iheyensis HTE831 OB0905 -66 5.3 TTATAAGGATTATAA
-49 4.3 TAATAATTTTATTAA
Paenibacillus sp. JDR-2 Pjdr2_1094 -209 4.1 TTGGAAGCATTACAA
Position: -60
Score: 5.1
Sequence: TAAAAATAATTTTAA
Locus tag: Bcoam_010100006000
Bcoam_010100006000 -60 5.1 TAAAAATAATTTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: spxA
Ortholog function: Transcriptional regulator
Bacillus subtilis subsp. subtilis str. 168 BSU11500 -65 4.5 TTAGAGTAATTTCAA
Bacillus amyloliquefaciens FZB42 RBAM_011500 -90 4.3 GTATAATACCTATAA
-64 4.5 TTAAAGTCATTTCAA
Bacillus pumilus SAFR-032 BPUM_1077 -91 4.8 GTATAATCACTATAA
-65 4.9 TTAGAACAATTTTAA
Bacillus licheniformis DSM 13 BLi01238 -62 4.5 TTAGAGTTATTTCAA
Anoxybacillus flavithermus WK1 Aflv_2127 -75 5 TTAAAGTCATTTTAA
Geobacillus kaustophilus HTA426 GK0817 -165 4.5 TTAAAGTCATTTCAA
Bacillus cereus ATCC 14579 BC1188 -181 4.9 GTATAATGATTATAG
Oceanobacillus iheyensis HTE831 OB1213 -72 4.8 TTAGACTAATTTTAA
Position: -75
Score: 4.7
Sequence: TTGTAATTATTTTAT
Locus tag: Bcoam_010100011065
Bcoam_010100011065 -75 4.7 TTGTAATTATTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Transcriptional regulator for iron transport and metabolism
Bacillus subtilis subsp. subtilis str. 168 BSU23520 -116 5.2 TTAAAATCATTATTA
-76 5.6 TTATAATAATTATAG
Bacillus amyloliquefaciens FZB42 RBAM_021640 -116 5 TTAGAATGATTATCA
-76 5.6 TTATAATAATTATAG
Bacillus pumilus SAFR-032 BPUM_2084 -116 5 TTATAATCGTTATTA
-76 5.3 TTAAAATGATTATAG
Bacillus licheniformis DSM 13 BLi02503 -117 5.5 TTATAATGATTATTA
-77 5.5 TTATAATGATTATAG
Anoxybacillus flavithermus WK1 Aflv_0995 -236 4.3 GAAAAATAATTATTA
-219 4.6 TAATAATCATTTTAT
-196 5 TTATAATCATTTTAT
Geobacillus kaustophilus HTA426 GK2317 -100 4.4 TAATAACCATTATCA
-77 4.1 TAATAGTGATTTTAC
Bacillus cereus ATCC 14579 BC4091 -99 4.5 TGAGAATAATTATCA
Bacillus halodurans C-125 BH1527 -118 4.3 TTATAACAAATATTA
-101 4.4 TAATAATAATTATCT
-77 5.1 TAATAATCATTATTA
Bacillus clausii KSM-K16 ABC1780 -124 4.9 TTAGAATAATTCCAA
-83 4.7 TTGGAATCATTATTA
Oceanobacillus iheyensis HTE831 OB1849 -94 6 TTATAATTATTATAA
Paenibacillus sp. JDR-2 Pjdr2_1270 -117 4.1 GTGTAATAATGATAA
-91 5.7 TTATAATTATTCTAA
-75 5.5 TTATAATCATTCTAA
Position: -90
Score: 5.3
Sequence: TTAGAATAATTATTA
Locus tag: Bcoam_010100017105
Bcoam_010100017105 -90 5.3 TTAGAATAATTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ahpC
Ortholog function: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Bacillus subtilis subsp. subtilis str. 168 BSU40090 -60 4.9 TTAGAATTATTATTG
Bacillus amyloliquefaciens FZB42 RBAM_036960 -79 4.9 TTAGAATTATTATTG
Bacillus licheniformis DSM 13 BLi04291 -70 5.6 TTATAATAATTATAG
Anoxybacillus flavithermus WK1 Aflv_2773 -100 5.5 TTATAATTGTTATAA
Geobacillus kaustophilus HTA426 GK2575 -44 5.7 TTAAAATTATTATAA
Bacillus cereus ATCC 14579 BC0377 -88 5.3 TTAGAATTATTATAG