Propagation of RhaS regulog to Klebsiella pneumoniae 342
Source regulog: | RhaS - Enterobacteriales |
Regulator type: | Transcription factor |
Regulator family: | AraC |
Regulation mode: | activator |
Biological process: | Rhamnose utilization |
Effector: | Rhamnose |
Phylum: | Proteobacteria |
Propagated regulon: | |
Target genome | Klebsiella pneumoniae 342 |
Orthologous TF(s) | KPK_5465 |
Regulated genes | 4 |
Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -157
Score: 10.6 Sequence: CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAACACAAAGGT
Locus tag: KPK_1894
|
||||
KPK_1894 | -157 | 10.6 | CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAACACAAAGGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: rhiT | ||||
Ortholog function: Rhamnogalacturonide transporter | ||||
Citrobacter koseri ATCC BAA-895 | CKO_01081 | -147 | 11 | CTCTTTGTATTTTTGCCA-(15)-TGGCAAAAATGAAAAGGT |
Enterobacter sp. 638 | Ent638_2444 | -146 | 11.1 | CTCTTTGCATTATTGCCA-(15)-TGGCAGAAACAGAAAGGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3560 | -123 | 10.6 | ATCTTCCCTGTGCTGCCA-(15)-TGGCAAAAGCGCAAAGGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02390 | -157 | 10.3 | CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAGTACAAAGGT |
Position: -127
Score: 8.4 Sequence: TTAAGCCCATGGTTGCCA-(15)-TGGCAACGGCTTGAAGGC
Locus tag: KPK_5463
|
||||
KPK_5463 | -127 | 8.4 | TTAAGCCCATGGTTGCCA-(15)-TGGCAACGGCTTGAAGGC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: rhaT | ||||
Ortholog function: L-rhamnose:proton symporter | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03094 | -126 | 8.5 | ATAACGTGCTGGTTGCCA-(15)-CGGCAATCCTCAAAAGGT |
Enterobacter sp. 638 | Ent638_4064 | -127 | 8.3 | TTAACGCGTTGATTGCCA-(15)-CGGCAACCTTCTGAAGGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0450 | -171 | 8.4 | ACCTTCAAACCGATGCCG-(15)-TGGCACGCATCTGAAGGT |
Escherichia coli str. K-12 substr. MG1655 | b3907 | -123 | 9.3 | TTAATGCCGTGATTGCCA-(15)-CGGCAACAGGCGAAAGGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04216 | -127 | 8.6 | TTAAGCCCATGGTTGCCA-(15)-TGGCAACGTCCTGAAGGC |
Salmonella typhimurium LT2 | STM4050 | -271 | 9.7 | TTCTTTGCATTGTTGCCA-(14)-TGTCGTTATGATGAAGGT |
-127 | 7.8 | TTAACGTGCTGATTGCCA-(15)-CGGCAATCGTTATAAGGT | ||
Yersinia pestis KIM | y0593 | -149 | 9.3 | ACCTACTGAATTTTGCCA-(15)-AGGCAGTCAGCCGAAGGT |
Position: -255
Score: 9.8 Sequence: ACCTTCTCGCTACGGACA-(15)-TGGCAAGAAAGCAAAGGT
Locus tag: KPK_5465
|
||||
KPK_5465 | -255 | 9.8 | ACCTTCTCGCTACGGACA-(15)-TGGCAAGAAAGCAAAGGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: rhaS | ||||
Ortholog function: L-rhamnose operon transcriptional activator RhaS, AraC family | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03099 | -245 | 10.5 | ACCTTCCTGTTACTGACA-(15)-TGGCAAGGAGGCAAAGGT |
Enterobacter sp. 638 | Ent638_4066 | -245 | 9.1 | ACCTTCTCGCCACTGACA-(15)-TGGCAAGGAATCAAAGAT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0441 | -262 | 9.8 | ACCTTCCAATGAGTGCCA-(15)-TGGCAAAATGACAAAGCT |
Escherichia coli str. K-12 substr. MG1655 | b3905 | -232 | 10.3 | ACCTTCTCGTTACTGACA-(14)-TGGCAACCAGGGAAAGAT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04214 | -255 | 10.1 | ACCTTCTCGTTACGGACA-(15)-TGGCAAGAAAGCAAAGGT |
Salmonella typhimurium LT2 | STM4048 | -232 | 10.5 | ACCTTCTCGTTACTGACA-(14)-TGGCAACAAGGCAAAGAT |
Yersinia pestis KIM | y0590 | -265 | 10.2 | ACCTTCTCATCACTGCCA-(15)-TGGCAGAATGACGAAAGT |
Position: -106
Score: 10.3 Sequence: ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAGCGAGAAGGT
Locus tag: KPK_5467
|
||||
KPK_5467 | -106 | 10.3 | ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAGCGAGAAGGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: rhaB | ||||
Ortholog function: Rhamnulokinase (EC 2.7.1.5) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03100 | -160 | 10.7 | ACCTTTGCCTCCTTGCCA-(15)-TGTCAGTAACAGGAAGGT |
Enterobacter sp. 638 | Ent638_4067 | -107 | 10.1 | ATCTTTGATTCCTTGCCA-(15)-TGTCAGTGGCGAGAAGGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0440 | -105 | 9.7 | AGCTTTGTCATTTTGCCA-(15)-TGGCACTCATTGGAAGGT |
Escherichia coli str. K-12 substr. MG1655 | b3904 | -105 | 11.1 | ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04213 | -106 | 10.5 | ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAACGAGAAGGT |
Salmonella typhimurium LT2 | STM4047 | -105 | 11.3 | ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT |
Yersinia pestis KIM | y0587 | -212 | 10.1 | ACTTTCGTCATTCTGCCA-(15)-TGGCAGTGATGAGAAGGT |