Propagation of Rex regulog to Chloroflexus aurantiacus J-10-fl

Reference regulog properties
Source regulog:	Rex - Chloroflexia
Regulator type:	Transcription factor
Regulator family:	Rex
Regulation mode:	repressor
Biological process:	Energy metabolism
Effector:	NADH
Phylum:	Chloroflexi
Propagated regulon:
Target genome	Chloroflexus aurantiacus J-10-fl
Orthologous TF(s)	Caur_3653
Regulated genes	10

Built upon 49 sites [see more]

Predicted regulatory interactions in *Chloroflexus aurantiacus J-10-fl*
	Locus tag	Position	Score	Sequence
Position: -34 Score: 4.1 Sequence: TCGTGAAAGAATCCACGA Locus tag: Caur_0030
	Caur_0030	-34	4.1	TCGTGAAAGAATCCACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Chy400_0034
Ortholog function: hypothetical protein
Chloroflexus sp. Y-400-fl	Chy400_0034	-34	4.1	TCGTGAAAGAATCCACGA

Position: -54 Score: 5.4 Sequence: TTGTTATCTATATCACAA Locus tag: Caur_0613
	Caur_0613	-54	5.4	TTGTTATCTATATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acs
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Chloroflexus aggregans DSM 9485	Cagg_3394	-56	5.3	TTGTTATATCTATCACAA
Chloroflexus sp. Y-400-fl	Chy400_0662	-54	5.4	TTGTTATCTATATCACAA

Position: -63 Score: 4.8 Sequence: ATGTGGTATATTTCACAC Locus tag: Caur_1460
	Caur_1460	-63	4.8	ATGTGGTATATTTCACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Cagg_1949
Ortholog function: GCN5-related N-acetyltransferase
Chloroflexus aggregans DSM 9485	Cagg_1949	-68	5.1	ATGTGGTATATTTCACAT
Chloroflexus sp. Y-400-fl	Chy400_1583	-63	4.8	ATGTGGTATATTTCACAC
Roseiflexus castenholzii DSM 13941	Rcas_3936	-44	4.3	TTGTGCAAGATTTCACGG
Roseiflexus sp. RS-1	RoseRS_2002	-40	4.6	TTGTGCAAGATTTCACGT

Position: -61 Score: 4.5 Sequence: CTGTGCTGTAAATCACAA Locus tag: Caur_1538
	Caur_1538	-61	4.5	CTGTGCTGTAAATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fpr
Ortholog function: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
Chloroflexus aggregans DSM 9485	Cagg_2469	-56	5.2	CTGTGCTGTATATCACAA
Chloroflexus sp. Y-400-fl	Chy400_1671	-61	4.5	CTGTGCTGTAAATCACAA
Roseiflexus castenholzii DSM 13941	Rcas_4255	-115	3.9	CTGTTCCTTTCATCACAA
Roseiflexus sp. RS-1	RoseRS_0005	-106	3.8	CTGTTCCATCCATCACAA

Position: -54 Score: 5.2 Sequence: TTGTGATATACTTCTCAT Locus tag: Caur_1987
	Caur_1987	-54	5.2	TTGTGATATACTTCTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoA
Ortholog function: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Chloroflexus aggregans DSM 9485	Cagg_1631	-55	5.2	TTGTGATATACTTCTCAT
Chloroflexus sp. Y-400-fl	Chy400_2142	-54	5.2	TTGTGATATACTTCTCAT
Herpetosiphon aurantiacus ATCC 23779	Haur_4980	-117	5.1	CTGTGATATACTTCGCAA
Roseiflexus castenholzii DSM 13941	Rcas_2088	-64	5	TTGTGATATACTCAACAA

Position: -334 Score: 4.4 Sequence: AGGTGAAGGATTTTACAA Position: -109 Score: 4 Sequence: TTGTGAAAGATCGAACAA Locus tag: Caur_3047
	Caur_3047	-334	4.4	AGGTGAAGGATTTTACAA
		-109	4	TTGTGAAAGATCGAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpB
Ortholog function: ATP synthase A chain (EC 3.6.3.14)
Chloroflexus aggregans DSM 9485	Cagg_0991	-105	4.3	TTGTGAAAGACTGAACAA
Chloroflexus sp. Y-400-fl	Chy400_3293	-109	4	TTGTGAAAGATCGAACAA
Roseiflexus castenholzii DSM 13941	Rcas_1271	-36	4.4	TTGTGAAAGTGTTCTCAA
Roseiflexus sp. RS-1	RoseRS_0518	-44	4.4	TTGTGAAAGTGTTCTCAA

Position: -6 Score: 5.3 Sequence: TTGTGAATGATTTCACTA Locus tag: Caur_3358
	Caur_3358	-6	5.3	TTGTGAATGATTTCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Chloroflexus aggregans DSM 9485	Cagg_0500	-33	5.3	TTGTGAACAATTTCACCA
Chloroflexus sp. Y-400-fl	Chy400_3620	-33	5.3	TTGTGAATGATTTCACTA

Position: -250 Score: 5.2 Sequence: ACGTGATATTTATCACAA Locus tag: Caur_3599
	Caur_3599	-250	5.2	ACGTGATATTTATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoM3
Ortholog function: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Chloroflexus aggregans DSM 9485	Cagg_0775	-295	4.9	ATGTGAGGTATGTCACAA
Chloroflexus sp. Y-400-fl	Chy400_3880	-250	5.2	ACGTGATATTTATCACAA

Position: -55 Score: 4.7 Sequence: TTGTGCTACACTTCACAT Locus tag: Caur_3653
	Caur_3653	-55	4.7	TTGTGCTACACTTCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rex
Ortholog function: Redox-sensitive transcriptional regulator Rex
Chloroflexus aggregans DSM 9485	Cagg_0157	-47	4.7	TTGTGCTACACTTCACAT
Chloroflexus sp. Y-400-fl	Chy400_3940	-55	4.7	TTGTGCTACACTTCACAT
Herpetosiphon aurantiacus ATCC 23779	Haur_4427	-121	4.3	TTGCACTATACTTCACAA
Roseiflexus castenholzii DSM 13941	Rcas_1392	-109	4.3	TAGTGCTACACTTCACAT
Roseiflexus sp. RS-1	RoseRS_4103	-157	4.3	TAGTGCTACACTTCACAT

Position: -123 Score: 5.7 Sequence: TTGTGGTGAATATCACAA Locus tag: Caur_3742
	Caur_3742	-123	5.7	TTGTGGTGAATATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hepT
Ortholog function: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
Chloroflexus aggregans DSM 9485	Cagg_0899	-125	5.4	TTGTGGCGAATATCACAA
Chloroflexus sp. Y-400-fl	Chy400_4040	-123	5.7	TTGTGGTGAATATCACAA
Herpetosiphon aurantiacus ATCC 23779	Haur_2345	-44	4.6	ACGCGATAACTTTCACAA
Roseiflexus castenholzii DSM 13941	Rcas_2323	-48	5.8	TTGTTATGTATTTCACAA
Roseiflexus sp. RS-1	RoseRS_1698	-48	5.3	TTGTTCAGTATTTCACAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Rex regulog to Chloroflexus aurantiacus J-10-fl

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --