Propagation of Rex regulog to Chloroflexus aurantiacus J-10-fl
| Source regulog: | Rex - Chloroflexia |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Chloroflexi |
| Propagated regulon: | |
| Target genome | Chloroflexus aurantiacus J-10-fl |
| Orthologous TF(s) | Caur_3653 |
| Regulated genes | 10 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -34
Score: 4.1 Sequence: TCGTGAAAGAATCCACGA
Locus tag: Caur_0030
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| Caur_0030 | -34 | 4.1 | TCGTGAAAGAATCCACGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Chy400_0034 | ||||
| Ortholog function: hypothetical protein | ||||
| Chloroflexus sp. Y-400-fl | Chy400_0034 | -34 | 4.1 | TCGTGAAAGAATCCACGA |
|
Position: -54
Score: 5.4 Sequence: TTGTTATCTATATCACAA
Locus tag: Caur_0613
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| Caur_0613 | -54 | 5.4 | TTGTTATCTATATCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acs | ||||
| Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1) | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_3394 | -56 | 5.3 | TTGTTATATCTATCACAA |
| Chloroflexus sp. Y-400-fl | Chy400_0662 | -54 | 5.4 | TTGTTATCTATATCACAA |
|
Position: -63
Score: 4.8 Sequence: ATGTGGTATATTTCACAC
Locus tag: Caur_1460
|
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| Caur_1460 | -63 | 4.8 | ATGTGGTATATTTCACAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Cagg_1949 | ||||
| Ortholog function: GCN5-related N-acetyltransferase | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_1949 | -68 | 5.1 | ATGTGGTATATTTCACAT |
| Chloroflexus sp. Y-400-fl | Chy400_1583 | -63 | 4.8 | ATGTGGTATATTTCACAC |
| Roseiflexus castenholzii DSM 13941 | Rcas_3936 | -44 | 4.3 | TTGTGCAAGATTTCACGG |
| Roseiflexus sp. RS-1 | RoseRS_2002 | -40 | 4.6 | TTGTGCAAGATTTCACGT |
|
Position: -61
Score: 4.5 Sequence: CTGTGCTGTAAATCACAA
Locus tag: Caur_1538
|
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| Caur_1538 | -61 | 4.5 | CTGTGCTGTAAATCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fpr | ||||
| Ortholog function: Ferredoxin--NADP(+) reductase (EC 1.18.1.2) | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_2469 | -56 | 5.2 | CTGTGCTGTATATCACAA |
| Chloroflexus sp. Y-400-fl | Chy400_1671 | -61 | 4.5 | CTGTGCTGTAAATCACAA |
| Roseiflexus castenholzii DSM 13941 | Rcas_4255 | -115 | 3.9 | CTGTTCCTTTCATCACAA |
| Roseiflexus sp. RS-1 | RoseRS_0005 | -106 | 3.8 | CTGTTCCATCCATCACAA |
|
Position: -54
Score: 5.2 Sequence: TTGTGATATACTTCTCAT
Locus tag: Caur_1987
|
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| Caur_1987 | -54 | 5.2 | TTGTGATATACTTCTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoA | ||||
| Ortholog function: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_1631 | -55 | 5.2 | TTGTGATATACTTCTCAT |
| Chloroflexus sp. Y-400-fl | Chy400_2142 | -54 | 5.2 | TTGTGATATACTTCTCAT |
| Herpetosiphon aurantiacus ATCC 23779 | Haur_4980 | -117 | 5.1 | CTGTGATATACTTCGCAA |
| Roseiflexus castenholzii DSM 13941 | Rcas_2088 | -64 | 5 | TTGTGATATACTCAACAA |
|
Position: -334
Score: 4.4 Sequence: AGGTGAAGGATTTTACAA
Position: -109
Score: 4 Sequence: TTGTGAAAGATCGAACAA
Locus tag: Caur_3047
|
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| Caur_3047 | -334 | 4.4 | AGGTGAAGGATTTTACAA | |
| -109 | 4 | TTGTGAAAGATCGAACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: atpB | ||||
| Ortholog function: ATP synthase A chain (EC 3.6.3.14) | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_0991 | -105 | 4.3 | TTGTGAAAGACTGAACAA |
| Chloroflexus sp. Y-400-fl | Chy400_3293 | -109 | 4 | TTGTGAAAGATCGAACAA |
| Roseiflexus castenholzii DSM 13941 | Rcas_1271 | -36 | 4.4 | TTGTGAAAGTGTTCTCAA |
| Roseiflexus sp. RS-1 | RoseRS_0518 | -44 | 4.4 | TTGTGAAAGTGTTCTCAA |
|
Position: -6
Score: 5.3 Sequence: TTGTGAATGATTTCACTA
Locus tag: Caur_3358
|
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| Caur_3358 | -6 | 5.3 | TTGTGAATGATTTCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndh | ||||
| Ortholog function: NADH dehydrogenase (EC 1.6.99.3) | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_0500 | -33 | 5.3 | TTGTGAACAATTTCACCA |
| Chloroflexus sp. Y-400-fl | Chy400_3620 | -33 | 5.3 | TTGTGAATGATTTCACTA |
|
Position: -250
Score: 5.2 Sequence: ACGTGATATTTATCACAA
Locus tag: Caur_3599
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| Caur_3599 | -250 | 5.2 | ACGTGATATTTATCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoM3 | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_0775 | -295 | 4.9 | ATGTGAGGTATGTCACAA |
| Chloroflexus sp. Y-400-fl | Chy400_3880 | -250 | 5.2 | ACGTGATATTTATCACAA |
|
Position: -55
Score: 4.7 Sequence: TTGTGCTACACTTCACAT
Locus tag: Caur_3653
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| Caur_3653 | -55 | 4.7 | TTGTGCTACACTTCACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rex | ||||
| Ortholog function: Redox-sensitive transcriptional regulator Rex | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_0157 | -47 | 4.7 | TTGTGCTACACTTCACAT |
| Chloroflexus sp. Y-400-fl | Chy400_3940 | -55 | 4.7 | TTGTGCTACACTTCACAT |
| Herpetosiphon aurantiacus ATCC 23779 | Haur_4427 | -121 | 4.3 | TTGCACTATACTTCACAA |
| Roseiflexus castenholzii DSM 13941 | Rcas_1392 | -109 | 4.3 | TAGTGCTACACTTCACAT |
| Roseiflexus sp. RS-1 | RoseRS_4103 | -157 | 4.3 | TAGTGCTACACTTCACAT |
|
Position: -123
Score: 5.7 Sequence: TTGTGGTGAATATCACAA
Locus tag: Caur_3742
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| Caur_3742 | -123 | 5.7 | TTGTGGTGAATATCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hepT | ||||
| Ortholog function: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30) | ||||
| Chloroflexus aggregans DSM 9485 | Cagg_0899 | -125 | 5.4 | TTGTGGCGAATATCACAA |
| Chloroflexus sp. Y-400-fl | Chy400_4040 | -123 | 5.7 | TTGTGGTGAATATCACAA |
| Herpetosiphon aurantiacus ATCC 23779 | Haur_2345 | -44 | 4.6 | ACGCGATAACTTTCACAA |
| Roseiflexus castenholzii DSM 13941 | Rcas_2323 | -48 | 5.8 | TTGTTATGTATTTCACAA |
| Roseiflexus sp. RS-1 | RoseRS_1698 | -48 | 5.3 | TTGTTCAGTATTTCACAA |