Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Herpetosiphon aurantiacus ATCC 23779

Reference regulog properties
Source regulog: Rex - Chloroflexia
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Chloroflexi
Propagated regulon:
Target genome Herpetosiphon aurantiacus ATCC 23779
Orthologous TF(s) Haur_4427
Regulated genes 5
Built upon 49 sites [see more]
Predicted regulatory interactions in Herpetosiphon aurantiacus ATCC 23779
Locus tag Position Score Sequence
Position: -117
Score: 4.1
Sequence: TTGTGAAGTTTTTCCTTA
Locus tag: Haur_0429
Haur_0429 -117 4.1 TTGTGAAGTTTTTCCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pckA
Ortholog function: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
Herpetosiphon aurantiacus ATCC 23779 Haur_0429 -117 4.1 TTGTGAAGTTTTTCCTTA
Roseiflexus castenholzii DSM 13941 Rcas_2846 -42 3.9 TCGTGATGTGTTGCACGG
Roseiflexus sp. RS-1 RoseRS_2496 -42 5.3 TCGTGATGTGTTTCACGA
Position: -44
Score: 4.6
Sequence: ACGCGATAACTTTCACAA
Locus tag: Haur_2345
Haur_2345 -44 4.6 ACGCGATAACTTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hepT
Ortholog function: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
Chloroflexus aggregans DSM 9485 Cagg_0899 -125 5.4 TTGTGGCGAATATCACAA
Chloroflexus sp. Y-400-fl Chy400_4040 -123 5.7 TTGTGGTGAATATCACAA
Herpetosiphon aurantiacus ATCC 23779 Haur_2345 -44 4.6 ACGCGATAACTTTCACAA
Roseiflexus castenholzii DSM 13941 Rcas_2323 -48 5.8 TTGTTATGTATTTCACAA
Roseiflexus sp. RS-1 RoseRS_1698 -48 5.3 TTGTTCAGTATTTCACAA
Position: -121
Score: 4.3
Sequence: TTGCACTATACTTCACAA
Locus tag: Haur_4427
Haur_4427 -121 4.3 TTGCACTATACTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rex
Ortholog function: Redox-sensitive transcriptional regulator Rex
Chloroflexus aggregans DSM 9485 Cagg_0157 -47 4.7 TTGTGCTACACTTCACAT
Chloroflexus sp. Y-400-fl Chy400_3940 -55 4.7 TTGTGCTACACTTCACAT
Herpetosiphon aurantiacus ATCC 23779 Haur_4427 -121 4.3 TTGCACTATACTTCACAA
Roseiflexus castenholzii DSM 13941 Rcas_1392 -109 4.3 TAGTGCTACACTTCACAT
Roseiflexus sp. RS-1 RoseRS_4103 -157 4.3 TAGTGCTACACTTCACAT
Position: -117
Score: 5.1
Sequence: CTGTGATATACTTCGCAA
Locus tag: Haur_4980
Haur_4980 -117 5.1 CTGTGATATACTTCGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoA
Ortholog function: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Chloroflexus aggregans DSM 9485 Cagg_1631 -55 5.2 TTGTGATATACTTCTCAT
Chloroflexus sp. Y-400-fl Chy400_2142 -54 5.2 TTGTGATATACTTCTCAT
Herpetosiphon aurantiacus ATCC 23779 Haur_4980 -117 5.1 CTGTGATATACTTCGCAA
Roseiflexus castenholzii DSM 13941 Rcas_2088 -64 5 TTGTGATATACTCAACAA
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