Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GlnR regulog to Bacillus pseudofirmus OF4

Reference regulog properties
Source regulog: GlnR - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pseudofirmus OF4
Orthologous TF(s) BpOF4_14410, BpOF4_19470, BpOF4_07275
Regulated genes 3
Built upon 45 sites [see more]
Predicted regulatory interactions in Bacillus pseudofirmus OF4
Locus tag Position Score Sequence
Position: -101
Score: 5.4
Sequence: ATGTTAGATTATGTGACAT
Locus tag: BpOF4_09390
BpOF4_09390 -101 5.4 ATGTTAGATTATGTGACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ureA
Ortholog function: Urease gamma subunit (EC 3.5.1.5)
Bacillus subtilis subsp. subtilis str. 168 BSU36660 -833 5.1 tTGTaAactTTTaTAACAT
Bacillus amyloliquefaciens FZB42 RBAM_033830 -204 4.8 ATGTAACCTTTCTTCACAT
Bacillus halodurans C-125 BH0252 -166 4.8 TCGTTAGAAATCGTTACAT
-97 4.6 CTGTAATCTTTTCTAACAA
-62 5 TTGTCATCAAAGATAACAT
Position: -125
Score: 5.2
Sequence: TTGTCAGATAATCTAACAA
Locus tag: BpOF4_14410
BpOF4_14410 -125 5.2 TTGTCAGATAATCTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU13310 -82 5.4 ATGTTAGAAAATATGACAA
Bacillus pumilus SAFR-032 BPUM_1230 -122 4.3 TTGTCAACTTTCCTTCCAT
-81 4.9 GTGTTATATTTTCTAACAA
Bacillus licheniformis DSM 13 BLi01490 -82 4.9 ATGTTAGATTTTCTGACAG
Anoxybacillus flavithermus WK1 Aflv_1544 -114 5.2 TTGTTACTTTTTATAACAT
-83 5.1 TTGTTACTTTTTATAACAA
-28 5.5 ATGTTATAAAATATGACAT
Geobacillus kaustophilus HTA426 GK1860 -87 4.8 ATGTTAATTTTATTTACAA
-34 4.7 ACGTTAGAAAATATAACGT
Bacillus halodurans C-125 BH1494 -111 5.4 TTGTAAGAAAATCTAACAT
Bacillus clausii KSM-K16 ABC1760 -100 5.4 TTGTTAGATTTTCTTACAT
Oceanobacillus iheyensis HTE831 OB1650 -81 5.5 ATGTTAGAAATACTAACAT
Paenibacillus sp. JDR-2 Pjdr2_5154 -303 5.5 TTGTTAGATAATCTAACAT
-42 4.8 GTGTTAGAAAACATTACAT
Position: -81
Score: 4.5
Sequence: ATGTGAGGGAAGCTGACAT
Locus tag: BpOF4_19470
BpOF4_19470 -81 4.5 ATGTGAGGGAAGCTGACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU17450 -83 5.3 ATGTTAAGAATCCTTACAT
-60 5 TTGACACATAATATAACAT
Bacillus amyloliquefaciens FZB42 RBAM_017250 -83 5.3 ATGTTAAGATTCCTTACAT
-60 5 TTGACACAAAATATAACAT
Bacillus pumilus SAFR-032 BPUM_1636 -83 5.3 ATGTTAATATTCCTAACAT
-60 5.1 TTGACATATAATATAACAT
-55 4.6 ATATAATATAACATGACAT
Bacillus licheniformis DSM 13 BLi01992 -82 5.2 ATGTAAAGAATCCTTACAT
-59 5 TTGACACATTATATAACAT
Anoxybacillus flavithermus WK1 Aflv_1508 -83 4.8 ATGTGATAAAATGTAACGT
-60 4.8 TTGACATATAAGTTAACAT
Geobacillus kaustophilus HTA426 GK1326 -82 4.5 TTGTGAGGAAACATCACGT
Bacillus cereus ATCC 14579 BC3706 -84 5.3 ATGTAAGAAAAGCTAACAT
-62 4.8 TTGACACTAAACATAACAT
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