Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Bacillus pseudofirmus OF4

Reference regulog properties
Source regulog: Zur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pseudofirmus OF4
Orthologous TF(s) BpOF4_13830
Regulated genes 4
Built upon 67 sites [see more]
Predicted regulatory interactions in Bacillus pseudofirmus OF4
Locus tag Position Score Sequence
Position: -114
Score: 6.8
Sequence: CAAAACGTAATAATTACGATTTA
Position: -37
Score: 6.6
Sequence: TAAATCGTAATTATTACGTATTA
Locus tag: BpOF4_02480
BpOF4_02480 -114 6.8 CAAAACGTAATAATTACGATTTA
-37 6.6 TAAATCGTAATTATTACGTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Bacillus subtilis subsp. subtilis str. 168 BSU03360 -37 5.8 TAAATCGTAATCATTCTATTTTA
Bacillus amyloliquefaciens FZB42 RBAM_003550 -103 6.6 TAAATAGTAACGATTACGATTTA
-38 5.7 TAAATCGTAATCATTCTATTTTG
Bacillus pumilus SAFR-032 BPUM_3311 -69 6.6 CAAATCGTAATCATTACTTTTTA
Bacillus licheniformis DSM 13 BLi00765 -46 7 TAAATCGTAATAATTACGATTTG
Bacillus clausii KSM-K16 ABC4020 -40 6.9 TAATTCGTAATCATTACGATTTA
Oceanobacillus iheyensis HTE831 OB3429 -82 6.3 TTAATCGTAATGATTACGTTTTT
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Position: -115
Score: 6.6
Sequence: TAATACGTAATAATTACGATTTA
Position: -38
Score: 6.8
Sequence: TAAATCGTAATTATTACGTTTTG
Locus tag: BpOF4_02485
BpOF4_02485 -115 6.6 TAATACGTAATAATTACGATTTA
-38 6.8 TAAATCGTAATTATTACGTTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: OB3431
Ortholog function: hypothetical protein
Oceanobacillus iheyensis HTE831 OB3431 -247 6 TTAATCGTAATCGTTACGATGTA
Position: -165
Score: 6.6
Sequence: TAAAACGTAATGATTTCGATTTG
Position: -58
Score: 6.7
Sequence: CAAATCGAAATAATTACGATTTA
Locus tag: BpOF4_06230
BpOF4_06230 -165 6.6 TAAAACGTAATGATTTCGATTTG
-58 6.7 CAAATCGAAATAATTACGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpsN2
Ortholog function: 30S ribosomal protein S14
Bacillus subtilis subsp. subtilis str. 168 BSU08880 -40 6.6 TAAATCGTAACAATTTCGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_009150 -37 6.7 CAAAACGTAATTATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_3312 -69 6.6 CAAATCGTAATCATTACTTTTTA
Bacillus licheniformis DSM 13 BLi00952 -44 6.7 TAAATCGTAATCATTACGCTTTG
Bacillus clausii KSM-K16 ABC4019 -45 6.1 TAAATCGTAATAATAATGATTTT
Oceanobacillus iheyensis HTE831 OB3432 -247 6 TTAATCGTAATCGTTACGATGTA
Position: -40
Score: 6.2
Sequence: AAAATAATAATTATTACGATTTA
Locus tag: BpOF4_16915
BpOF4_16915 -40 6.2 AAAATAATAATTATTACGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Bacillus subtilis subsp. subtilis str. 168 BSU03360 -37 5.8 TAAATCGTAATCATTCTATTTTA
Bacillus amyloliquefaciens FZB42 RBAM_003550 -103 6.6 TAAATAGTAACGATTACGATTTA
-38 5.7 TAAATCGTAATCATTCTATTTTG
Bacillus pumilus SAFR-032 BPUM_3311 -69 6.6 CAAATCGTAATCATTACTTTTTA
Bacillus licheniformis DSM 13 BLi00765 -46 7 TAAATCGTAATAATTACGATTTG
Bacillus clausii KSM-K16 ABC4020 -40 6.9 TAATTCGTAATCATTACGATTTA
Oceanobacillus iheyensis HTE831 OB3429 -82 6.3 TTAATCGTAATGATTACGTTTTT
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
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