Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YodB/CatR regulog to Bacillus pseudofirmus OF4

Reference regulog properties
Source regulog: YodB/CatR - Bacillales
Regulator type: Transcription factor
Regulator family: HxlR
Regulation mode: repressor
Biological process: Oxidative stress response
Effector: Diamide; Quinone
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pseudofirmus OF4
Orthologous TF(s) BpOF4_09090, BpOF4_17490
Regulated genes 1
Built upon 42 sites [see more]
Predicted regulatory interactions in Bacillus pseudofirmus OF4
Locus tag Position Score Sequence
Position: -145
Score: 4.6
Sequence: ACTAACTTTTTTAAAGT
Position: -141
Score: 4.8
Sequence: ACTTTTTTAAAGTAACT
Locus tag: BpOF4_09090
BpOF4_09090 -145 4.6 ACTAACTTTTTTAAAGT
-141 4.8 ACTTTTTTAAAGTAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yodB
Ortholog function: Transcriptional regulator of oxidative stress, HxlR family
Anoxybacillus flavithermus WK1 Aflv_1958 -78 5 ACTTACTTTTTATTAGT
-41 4.6 AGTTACAATAAGTTTGT
Bacillus amyloliquefaciens FZB42 RBAM_019300 -80 5.3 GCTTACTAAATGTAACT
Bacillus cereus ATCC 14579 BC5197 -49 4.1 ACTTACTTTTTACAAGA
Bacillus licheniformis DSM 13 BLi02274 -90 5.5 ACTTACTTTTTGTAACT
Bacillus pumilus SAFR-032 BPUM_1875 -81 5.5 ACTTACTTATTGTAACT
Bacillus subtilis subsp. subtilis str. 168 BSU19540 -80 5.3 GCTTACTAAATGTAACT
Paenibacillus sp. JDR-2 Pjdr2_4807 -134 4.2 ACTTACTTTAGTCAAGT
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