Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Cyanothece sp. PCC 8801

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. PCC 8801
Orthologous TF(s) PCC8801_0870
Regulated genes 32
Built upon 167 sites [see more]
Predicted regulatory interactions in Cyanothece sp. PCC 8801
Locus tag Position Score Sequence
Position: -310
Score: 3.4
Sequence: ATTGTAAATTTTTTGCTAA
Position: -299
Score: 3.7
Sequence: TTTGCTAATAATAATTACA
Position: -53
Score: 3.4
Sequence: GTTAAGAAATCTTGCCATT
Position: -13
Score: 3.1
Sequence: ATTGAAACAGACTATGACC
Locus tag: PCC8801_0056
PCC8801_0056 -310 3.4 ATTGTAAATTTTTTGCTAA
-299 3.7 TTTGCTAATAATAATTACA
-53 3.4 GTTAAGAAATCTTGCCATT
-13 3.1 ATTGAAACAGACTATGACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -245
Score: 3
Sequence: AATGATTGCTGATAGCTGT
Position: -241
Score: 3.3
Sequence: ATTGCTGATAGCTGTTTTT
Position: -238
Score: 3
Sequence: GCTGATAGCTGTTTTTTAT
Position: -234
Score: 3
Sequence: ATAGCTGTTTTTTATCTTA
Position: -212
Score: 3
Sequence: TATGGCAGAAGAAATTATT
Position: -194
Score: 3
Sequence: TTTCCATAATTTTATTAAC
Locus tag: PCC8801_0256
PCC8801_0256 -245 3 AATGATTGCTGATAGCTGT
-241 3.3 ATTGCTGATAGCTGTTTTT
-238 3 GCTGATAGCTGTTTTTTAT
-234 3 ATAGCTGTTTTTTATCTTA
-212 3 TATGGCAGAAGAAATTATT
-194 3 TTTCCATAATTTTATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: -134
Score: 4.2
Sequence: TAAGATAATGATTAACTAT
Position: -113
Score: 3.6
Sequence: ATCGTGAATAATTAATTTT
Position: -107
Score: 3.3
Sequence: AATAATTAATTTTTTTTAT
Position: -106
Score: 3.3
Sequence: ATAATTAATTTTTTTTATT
Position: -103
Score: 3.6
Sequence: ATTAATTTTTTTTATTAAG
Position: -90
Score: 3.6
Sequence: ATTAAGAATCATCAAAAAT
Locus tag: PCC8801_0349
PCC8801_0349 -134 4.2 TAAGATAATGATTAACTAT
-113 3.6 ATCGTGAATAATTAATTTT
-107 3.3 AATAATTAATTTTTTTTAT
-106 3.3 ATAATTAATTTTTTTTATT
-103 3.6 ATTAATTTTTTTTATTAAG
-90 3.6 ATTAAGAATCATCAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sll1407
Ortholog function: Predicted methyltransferase
Cyanothece sp. PCC 8801 PCC8801_0349 -107 3.3 AATAATTAATTTTTTTTAT
Position: -230
Score: 3.1
Sequence: ACTAGGAACAATTCTTAAA
Position: -218
Score: 3.1
Sequence: TCTTAAATAGTTAATTAAT
Position: -170
Score: 3.2
Sequence: AAAAAAAGTTTTTCGCTTT
Locus tag: PCC8801_0567
PCC8801_0567 -230 3.1 ACTAGGAACAATTCTTAAA
-218 3.1 TCTTAAATAGTTAATTAAT
-170 3.2 AAAAAAAGTTTTTCGCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase, subunit II
Cyanothece sp. ATCC 51142 cce_1977 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0567 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22930 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr0950 -134 3.7 TTTACTCAAGATTATTAAT
Position: 29
Score: 3.2
Sequence: AGTGACGATTAATCTTCAT
Position: 30
Score: 2.9
Sequence: GTGACGATTAATCTTCATT
Locus tag: PCC8801_0569
PCC8801_0569 29 3.2 AGTGACGATTAATCTTCAT
30 2.9 GTGACGATTAATCTTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase, subunit III
Cyanothece sp. ATCC 51142 cce_1975 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0569 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22950 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr2516 -190 3 AgTTAaAAagtTaaTaAgT
Position: -16
Score: 3.4
Sequence: AATGGGGATATTGATCATG
Position: -7
Score: 3.9
Sequence: ATTGATCATGATCACCTTT
Locus tag: PCC8801_0790
PCC8801_0790 -16 3.4 AATGGGGATATTGATCATG
-7 3.9 ATTGATCATGATCACCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_4533
Ortholog function: Conserved hypothetical protein
Cyanothece sp. ATCC 51142 cce_4533 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0790 -242 2.7 ATTTAGTAAATTTTAAAGT
Position: -300
Score: 3
Sequence: TTTGACCCTATTTTTGTTT
Position: -288
Score: 4
Sequence: TTTGTTTTTTGTTCTTATT
Position: -281
Score: 3.1
Sequence: TTTGTTCTTATTTATAAAA
Position: -272
Score: 3.8
Sequence: ATTTATAAAAAATATAATA
Position: -269
Score: 3.3
Sequence: TATAAAAAATATAATAATA
Position: -257
Score: 3
Sequence: AATAATAAAATTAAAATTT
Position: -254
Score: 3
Sequence: AATAAAATTAAAATTTAGT
Position: -231
Score: 3.1
Sequence: TTTAAAGTTTTTAATGAAT
Position: -196
Score: 3.1
Sequence: TTTAAAAATAATTATATGC
Position: -193
Score: 3.1
Sequence: AAAAATAATTATATGCAAG
Position: -163
Score: 3
Sequence: TTTTACTGCCTAAATCATT
Position: -156
Score: 3
Sequence: GCCTAAATCATTTTTCAAT
Position: -98
Score: 3.3
Sequence: AATGAGATTCATGAAATAT
Position: -75
Score: 3.1
Sequence: GCTGCTAAGACTTCTGAAT
Locus tag: PCC8801_0791
PCC8801_0791 -300 3 TTTGACCCTATTTTTGTTT
-288 4 TTTGTTTTTTGTTCTTATT
-281 3.1 TTTGTTCTTATTTATAAAA
-272 3.8 ATTTATAAAAAATATAATA
-269 3.3 TATAAAAAATATAATAATA
-257 3 AATAATAAAATTAAAATTT
-254 3 AATAAAATTAAAATTTAGT
-231 3.1 TTTAAAGTTTTTAATGAAT
-196 3.1 TTTAAAAATAATTATATGC
-193 3.1 AAAAATAATTATATGCAAG
-163 3 TTTTACTGCCTAAATCATT
-156 3 GCCTAAATCATTTTTCAAT
-98 3.3 AATGAGATTCATGAAATAT
-75 3.1 GCTGCTAAGACTTCTGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: 24
Score: 3.2
Sequence: ATTAAAAATTATGATCTGA
Locus tag: PCC8801_0807
PCC8801_0807 24 3.2 ATTAAAAATTATGATCTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: Allophycocyanin, beta subunit
Synechococcus sp. PCC 7002 SYNPCC7002_A1631 -257 3.3 TTTTATTATTTTTTTTAAA
Cyanothece sp. ATCC 51142 cce_1944 -151 4.4 ATTGCTAAAATCTATAATT
Cyanothece sp. PCC 7425 Cyan7425_1838 -245 3 TTTTATATTATCTTTTAAC
Thermosynechococcus elongatus BP-1 null -157 3.1 AATTATGAACTTTTGTAAT
Position: -97
Score: 4.6
Sequence: GTTGCAAATTATTTGCAAT
Position: -54
Score: 4
Sequence: ATTAAGAGGCACTATCATT
Position: -48
Score: 3.7
Sequence: AGGCACTATCATTATCAAT
Position: -17
Score: 4.1
Sequence: CTTGAGAGTGATTAACCAT
Locus tag: PCC8801_0870
PCC8801_0870 -97 4.6 GTTGCAAATTATTTGCAAT
-54 4 ATTAAGAGGCACTATCATT
-48 3.7 AGGCACTATCATTATCAAT
-17 4.1 CTTGAGAGTGATTAACCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Ferric uptake regulator, Fur family
Synechococcus sp. PCC 7002 SYNPCC7002_A1649 -88 3.5 GTTAGTATTTATTTGCAAT
Cyanothece sp. ATCC 51142 cce_2330 -96 5.1 GTTGCTAATTATTTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0870 -97 4.6 GTTGCAAATTATTTGCAAT
Trichodesmium erythraeum IMS101 Tery_1958 -44 4.7 ATTGTGTATCATTGTCAAT
Thermosynechococcus elongatus BP-1 null -59 4.4 CATTGTAATTATTCTCAAT
Position: -234
Score: 4.1
Sequence: ACTGAAAGTCTTTATCAAA
Position: -100
Score: 4.9
Sequence: TTTGAGAATTATTAGGAAT
Position: -90
Score: 4
Sequence: ATTAGGAATAATTAGCAAC
Position: -47
Score: 4.2
Sequence: ATCAATAAATATAGTCAAT
Locus tag: PCC8801_1443
PCC8801_1443 -234 4.1 ACTGAAAGTCTTTATCAAA
-100 4.9 TTTGAGAATTATTAGGAAT
-90 4 ATTAGGAATAATTAGCAAC
-47 4.2 ATCAATAAATATAGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Fe ABC transport system, substrate-binding protein
Synechocystis sp. PCC 6803 slr1295 -44 4.9 ATTGAGAATTACTTTTATT
Cyanothece sp. ATCC 51142 cce_2632 -20 4.8 ATCAATAATAATTTTCAAT
Cyanothece sp. PCC 8801 PCC8801_1443 -90 4 ATTAGGAATAATTAGCAAC
Position: -33
Score: 4.1
Sequence: TTCATTAACTATTATCAAT
Locus tag: PCC8801_1444
PCC8801_1444 -33 4.1 TTCATTAACTATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Fe ABC transport system, substrate-binding protein
Cyanothece sp. PCC 8801 PCC8801_1444 -90 4 ATTAGGAATAATTAGCAAC
Microcystis aeruginosa NIES-843 MAE_56680 -61 4.9 GATAAGAATTATTCTCAAT
Position: -213
Score: 4.9
Sequence: CTTGACAAAGATTCTTATT
Locus tag: PCC8801_1756
PCC8801_1756 -213 4.9 CTTGACAAAGATTCTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0871 -83 5.1 GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142 cce_3801 -163 4.2 ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425 Cyan7425_3510 -105 5.3 ATTGAGAATAATTTTCAAA
-60 4 GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843 MAE_12460 -117 4.4 TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101 Tery_3222 -94 5.1 AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_1406 -81 4.2 ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab CYA_2794 -26 3.8 AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421 gll1012 -64 3.7 ATTGACAATTAATTGCAGC
Position: -253
Score: 3.4
Sequence: GTTGAGTTAAATGAGAAAT
Position: -237
Score: 4
Sequence: AATGAATAACTTTATTATA
Position: -222
Score: 3.1
Sequence: TATAATCTTGACTAGCTTT
Position: -187
Score: 2.9
Sequence: AAAAATATTTTATATTTAT
Position: -167
Score: 2.9
Sequence: GTTGGTTGATTTTTTGAAT
Position: -157
Score: 3
Sequence: TTTTTGAATATTACTTAAG
Position: -129
Score: 3.2
Sequence: ATTGAGAATAATATATCTC
Position: -65
Score: 3.8
Sequence: GTTGGGAAAAACAGTCATT
Position: -46
Score: 3.4
Sequence: TTCTAGATTCATTCGGAAT
Position: -1
Score: 3.6
Sequence: AATGAACAAAATAATACTT
Position: 15
Score: 3.5
Sequence: CTTGACTTTTACAATCAAA
Locus tag: PCC8801_1928
PCC8801_1928 -253 3.4 GTTGAGTTAAATGAGAAAT
-237 4 AATGAATAACTTTATTATA
-222 3.1 TATAATCTTGACTAGCTTT
-187 2.9 AAAAATATTTTATATTTAT
-167 2.9 GTTGGTTGATTTTTTGAAT
-157 3 TTTTTGAATATTACTTAAG
-129 3.2 ATTGAGAATAATATATCTC
-65 3.8 GTTGGGAAAAACAGTCATT
-46 3.4 TTCTAGATTCATTCGGAAT
-1 3.6 AATGAACAAAATAATACTT
15 3.5 CTTGACTTTTACAATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0061
Ortholog function: Two-component sensor histidine kinase
Synechococcus sp. PCC 7002 SYNPCC7002_G0061 -62 4.1 ATTGATAAATAATTTAAGT
Cyanothece sp. PCC 8801 PCC8801_1928 -184 2 AATATTTTATATTTATAGT
Nostoc sp. PCC 7120 alr3155 -98 4.1 ATTACGAATTAATATAAAT
Position: -257
Score: 3.4
Sequence: CTAAAGAGCTATTTTCAAT
Position: -186
Score: 3
Sequence: TAAGATTTTGTTAAGAATT
Position: -127
Score: 3.1
Sequence: GTTAAGAAAAGTAAAGATT
Position: -118
Score: 2.9
Sequence: AGTAAAGATTTCTCACATT
Locus tag: PCC8801_1960
PCC8801_1960 -257 3.4 CTAAAGAGCTATTTTCAAT
-186 3 TAAGATTTTGTTAAGAATT
-127 3.1 GTTAAGAAAAGTAAAGATT
-118 2.9 AGTAAAGATTTCTCACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -340
Score: 3.7
Sequence: GTTGAGTGAGATTGTCATG
Position: -296
Score: 4.6
Sequence: ACTGCTAATTATTCTCAAG
Position: -274
Score: 4.3
Sequence: ATCAAAAAAGATTCTCAGT
Position: -165
Score: 3.4
Sequence: AATGCGTTACTTTATTAAA
Locus tag: PCC8801_2450
PCC8801_2450 -340 3.7 GTTGAGTGAGATTGTCATG
-296 4.6 ACTGCTAATTATTCTCAAG
-274 4.3 ATCAAAAAAGATTCTCAGT
-165 3.4 AATGCGTTACTTTATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dpsA
Ortholog function: Nutrient stress-induced DNA-binding protein
Cyanothece sp. ATCC 51142 cce_0479 -144 4.7 GATGCAATATATTCTCAAT
Nostoc sp. PCC 7120 alr3808 -204 3.5 GTTTAGAAATTATTGCAAT
Position: -247
Score: 3.1
Sequence: ATTTCTCCTTATTTTTAAT
Position: -211
Score: 3
Sequence: TAAGCTTAAAATGGGCATT
Position: -58
Score: 3.7
Sequence: ACTGACTTAGATTGACATT
Position: -48
Score: 3.6
Sequence: ATTGACATTTTATAGTAAA
Position: 12
Score: 3.1
Sequence: TGGGAGAATTTTAAGCAAA
Locus tag: PCC8801_2575
PCC8801_2575 -247 3.1 ATTTCTCCTTATTTTTAAT
-211 3 TAAGCTTAAAATGGGCATT
-58 3.7 ACTGACTTAGATTGACATT
-48 3.6 ATTGACATTTTATAGTAAA
12 3.1 TGGGAGAATTTTAAGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2351
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2351 -216 2.9 TTTATTATTGTTTTTTAGT
Cyanothece sp. ATCC 51142 cce_3809 -132 3.2 GTTTTTATTTTCTGTCAAT
Cyanothece sp. PCC 8801 PCC8801_2575 -247 3.1 ATTTCTCCTTATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_2644 -122 4.2 AATTAGATTAATTTTGAAT
Position: -89
Score: 3.6
Sequence: TTTGATGACTTTTGTTTAT
Position: -67
Score: 4.4
Sequence: TATGATAAAATTTATTAAA
Position: -64
Score: 3.4
Sequence: GATAAAATTTATTAAAAAT
Position: -57
Score: 3.4
Sequence: TTTATTAAAAATTAACATA
Position: -50
Score: 2.9
Sequence: AAAATTAACATATCGCAAT
Position: -17
Score: 3.2
Sequence: CAGGAGAGTACAACTCAAT
Locus tag: PCC8801_2812
PCC8801_2812 -89 3.6 TTTGATGACTTTTGTTTAT
-67 4.4 TATGATAAAATTTATTAAA
-64 3.4 GATAAAATTTATTAAAAAT
-57 3.4 TTTATTAAAAATTAACATA
-50 2.9 AAAATTAACATATCGCAAT
-17 3.2 CAGGAGAGTACAACTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0913
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0913 -146 2.2 TTTTTACAACATTTTTAAA
-68 3.8 AATGAGAAAATTTTGATAT
Synechocystis sp. PCC 6803 sll1911 -59 4.2 GTTGTTAAAATTTAACAAT
Cyanothece sp. ATCC 51142 cce_0019 -75 3.1 TTTTTTAATATTTTTTGAT
Cyanothece sp. PCC 8801 PCC8801_2812 -67 4.4 TATGATAAAATTTATTAAA
Trichodesmium erythraeum IMS101 Tery_4773 -64 2.4 TTTATGAAATATTTATGAT
Position: -140
Score: 3
Sequence: CTGCGTTATTCTTATCATT
Position: -134
Score: 3.5
Sequence: TATTCTTATCATTAGCTAT
Position: -69
Score: 3.1
Sequence: AGTGTTAAAATTTATTTAA
Position: -49
Score: 3.8
Sequence: ATTGTAAAAAAATATTAAC
Locus tag: PCC8801_2860
PCC8801_2860 -140 3 CTGCGTTATTCTTATCATT
-134 3.5 TATTCTTATCATTAGCTAT
-69 3.1 AGTGTTAAAATTTATTTAA
-49 3.8 ATTGTAAAAAAATATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdx
Ortholog function: Predicted ferredoxin
Cyanothece sp. ATCC 51142 cce_0892 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2860 -49 3.8 ATTGTAAAAAAATATTAAC
Trichodesmium erythraeum IMS101 Tery_4504 -35 2.6 GTTAATATTTTTTTATAAC
Position: -43
Score: 3
Sequence: AGAGTTGTTAGTTTTCATT
Position: 32
Score: 3.3
Sequence: TATTCTATTTGTACTCGTT
Locus tag: PCC8801_2861
PCC8801_2861 -43 3 AGAGTTGTTAGTTTTCATT
32 3.3 TATTCTATTTGTACTCGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142 cce_0893 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2861 -49 3.8 ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120 asl0883 -90 3.5 ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab CYA_0642 -92 2.8 ATTAAAAATATGATTTAAA
Position: -222
Score: 5.2
Sequence: TTTGCTATAGATTATCATT
Position: -38
Score: 5.7
Sequence: ATTGATAACTTTTCTCAAT
Locus tag: PCC8801_3017
PCC8801_3017 -222 5.2 TTTGCTATAGATTATCATT
-38 5.7 ATTGATAACTTTTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: Iron-siderophore complex transporter
Synechococcus sp. PCC 7002 SYNPCC7002_G0137 -279 4.2 ATTAAGAGATTATCTCAAT
Synechocystis sp. PCC 6803 sll1404 -286 4.6 TATGTGAAATATTATTATT
-110 6 ATTGAAAATAGTTATCAAT
-64 4.6 ATTGAGAATTACTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_3017 -38 5.7 ATTGATAACTTTTCTCAAT
Cyanothece sp. PCC 7425 Cyan7425_2418 -264 4.6 ATTGATGATTATTTTCAAC
Position: -73
Score: 3.7
Sequence: CTTCAATAAAAAACTCATT
Position: -63
Score: 3
Sequence: AAACTCATTTTTTCTCTTT
Position: 5
Score: 3.3
Sequence: AAAGCCAATATTAAGCAAA
Locus tag: PCC8801_3034
PCC8801_3034 -73 3.7 CTTCAATAAAAAACTCATT
-63 3 AAACTCATTTTTTCTCTTT
5 3.3 AAAGCCAATATTAAGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0089
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_G0089 -83 5.2 ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803 slr1485 -42 2.7 ACTGTGAAATTTATTTAAC
-9 2.2 GTTTTAATAATGTTTAAAT
Position: -89
Score: 5.5
Sequence: GTTGACAAAAATTCTCATT
Locus tag: PCC8801_3039
PCC8801_3039 -89 5.5 GTTGACAAAAATTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0098
Ortholog function: Predicted TonB-dependent siderophore receptor
Cyanothece sp. PCC 8801 PCC8801_3039 -89 5.5 GTTGACAAAAATTCTCATT
Position: -305
Score: 3.5
Sequence: AATTAAAATCAGTATTATA
Position: -268
Score: 3
Sequence: TTGAGTAACCATAATTATT
Position: -265
Score: 3.2
Sequence: AGTAACCATAATTATTAAC
Position: -262
Score: 3.2
Sequence: AACCATAATTATTAACCGT
Position: -207
Score: 3.4
Sequence: TTAAAAAAAGATAATAAAT
Position: -77
Score: 3.4
Sequence: TTCCCTAGAATTTGTCAAT
Position: -67
Score: 3.4
Sequence: TTTGTCAATAATTTGTAAC
Locus tag: PCC8801_3918
PCC8801_3918 -305 3.5 AATTAAAATCAGTATTATA
-268 3 TTGAGTAACCATAATTATT
-265 3.2 AGTAACCATAATTATTAAC
-262 3.2 AACCATAATTATTAACCGT
-207 3.4 TTAAAAAAAGATAATAAAT
-77 3.4 TTCCCTAGAATTTGTCAAT
-67 3.4 TTTGTCAATAATTTGTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate-flavodoxin oxidoreductase
Synechococcus sp. PCC 7002 SYNPCC7002_A1443 -165 2.2 TTTTCTTATAACTTTTAGC
Cyanothece sp. PCC 8801 PCC8801_3918 -67 3.4 TTTGTCAATAATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_38140 -292 3.9 ATTCTGAATATTAATTAAT
Nostoc sp. PCC 7120 alr2803 -92 3.8 ATTTTTAATCAGTATTAAT
Position: -305
Score: 3.3
Sequence: GGTGAAATTGATGTTAATT
Position: -299
Score: 3.3
Sequence: ATTGATGTTAATTTTTGTA
Position: -296
Score: 3.2
Sequence: GATGTTAATTTTTGTAAAG
Position: -286
Score: 3.3
Sequence: TTTGTAAAGAAAAATCAAA
Position: -210
Score: 3
Sequence: TGAGGAAATTTTAATTATT
Position: -204
Score: 3.4
Sequence: AATTTTAATTATTGTTAAG
Locus tag: PCC8801_4103
PCC8801_4103 -305 3.3 GGTGAAATTGATGTTAATT
-299 3.3 ATTGATGTTAATTTTTGTA
-296 3.2 GATGTTAATTTTTGTAAAG
-286 3.3 TTTGTAAAGAAAAATCAAA
-210 3 TGAGGAAATTTTAATTATT
-204 3.4 AATTTTAATTATTGTTAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: 11
Score: 3
Sequence: ATTTCCAAAATTTAGCCAG
Locus tag: PCC8801_4104
PCC8801_4104 11 3 ATTTCCAAAATTTAGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaB
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A2
Synechococcus sp. PCC 7002 SYNPCC7002_A1962 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0990 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47570 -297 3.2 ATTAATAAACTTTTGTAAA
Gloeobacter violaceus PCC 7421 gvip471 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -254
Score: 3.4
Sequence: TTTGACCATTGTCCTTTTT
Position: 21
Score: 4
Sequence: TCTGACACCGATTATTATT
Position: 27
Score: 3.6
Sequence: ACCGATTATTATTCTCCCT
Locus tag: PCC8801_4132
PCC8801_4132 -254 3.4 TTTGACCATTGTCCTTTTT
21 4 TCTGACACCGATTATTATT
27 3.6 ACCGATTATTATTCTCCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigC
Ortholog function: RNA polymerase sigma-subunit
Nostoc sp. PCC 7120 all1692 -320 3.5 AATAAACATAATTTTTACT
Position: -246
Score: 3.3
Sequence: TTTGTCAAGCATTATAAAA
Position: -207
Score: 3.2
Sequence: AATGAGTAACTACTTCAGT
Position: -195
Score: 3.4
Sequence: CTTCAGTCAATTTGTCAAT
Position: -171
Score: 3.1
Sequence: TAACAAAATATTTCACCTT
Position: -150
Score: 3
Sequence: TTTGCAAATTGTGTCAAAT
Position: -20
Score: 2.9
Sequence: ATCAAGGAGCTTTATCATA
Locus tag: PCC8801_4320
PCC8801_4320 -246 3.3 TTTGTCAAGCATTATAAAA
-207 3.2 AATGAGTAACTACTTCAGT
-195 3.4 CTTCAGTCAATTTGTCAAT
-171 3.1 TAACAAAATATTTCACCTT
-150 3 TTTGCAAATTGTGTCAAAT
-20 2.9 ATCAAGGAGCTTTATCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
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