Propagation of CcmR regulog to Trichodesmium erythraeum IMS101

Reference regulog properties
Source regulog:	CcmR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	repressor
Biological process:	Carbon dioxide fixation
Effector:
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Trichodesmium erythraeum IMS101
Orthologous TF(s)	No orthologous TFs found
Regulated genes	2

Built upon 72 sites [see more]

Predicted regulatory interactions in *Trichodesmium erythraeum IMS101*
	Locus tag	Position	Score	Sequence
Position: -120 Score: 3.9 Sequence: ATTTACTATTTTCCAT Position: -71 Score: 4.4 Sequence: ATTGGCTGAAATCTAT Locus tag: Tery_1615
	Tery_1615	-120	3.9	ATTTACTATTTTCCAT
		-71	4.4	ATTGGCTGAAATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mnhD
Ortholog function: Na/H antiporter, subunit D
Cyanothece sp. ATCC 51142	cce_1685	-232	4.5	ATAGTAATTAGCCTAT
		-200	5	ATAGAATCTAGTCTAT
Cyanothece sp. ATCC 51142	cce_2494	-180	5.1	ATTGATTTTAGGCTAT
Cyanothece sp. PCC 7425	Cyan7425_3543	-121	4.7	ATTTATAAATATCTAT
Cyanothece sp. PCC 8801	PCC8801_2761	-56	4.8	ATAGGCTTTAAGCTAT
		-24	4.7	ATAGTTTTTTGTATAT
Synechococcus sp. PCC 7002	SYNPCC7002_A2374	-123	5.2	ATAGATATTAAACTAT
Synechococcus sp. PCC 7002	SYNPCC7002_A2375	-123	5.2	ATAGATATTAAACTAT
Synechocystis sp. PCC 6803	slr2007	-125	3.8	ATAGAATCTATGCAAT
Synechocystis sp. PCC 6803	slr2009	-125	3.8	ATAGAATCTATGCAAT
Synechocystis sp. PCC 6803	slr2007	-107	4.3	ATTGTGATTGGTCTAT
Synechocystis sp. PCC 6803	slr2009	-107	4.3	ATTGTGATTGGTCTAT
Thermosynechococcus elongatus BP-1	tll1817	-219	5	ATTGATAAAAATCTAT
		-193	4.4	ATTGACATTGATCTAA

Position: -14 Score: 3.7 Sequence: CTTGACTAATACCAAT Position: 15 Score: 3.8 Sequence: ATTGATATTTATGTTT Locus tag: Tery_1619
	Tery_1619	-14	3.7	CTTGACTAATACCAAT
		15	3.8	ATTGATATTTATGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: slr2011
Ortholog function: Predicted subunit of the Na/H antiporter
Cyanothece sp. ATCC 51142	cce_1681	-232	4.5	ATAGTAATTAGCCTAT
		-200	5	ATAGAATCTAGTCTAT
Cyanothece sp. PCC 7425	Cyan7425_3547	-121	4.7	ATTTATAAATATCTAT
Synechococcus sp. PCC 7002	SYNPCC7002_A2379	-123	5.2	ATAGATATTAAACTAT
Synechocystis sp. PCC 6803	slr2011	-125	3.8	ATAGAATCTATGCAAT
Synechocystis sp. PCC 6803	slr2011	-107	4.3	ATTGTGATTGGTCTAT
Thermosynechococcus elongatus BP-1	tll1813	-219	5	ATTGATAAAAATCTAT
		-193	4.4	ATTGACATTGATCTAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of CcmR regulog to Trichodesmium erythraeum IMS101

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --