Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PedR regulog to Prochlorococcus marinus str. MIT 9303

Reference regulog properties
Source regulog: PedR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9303
Orthologous TF(s) null
Regulated genes 1
Built upon 56 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9303
Locus tag Position Score Sequence
Position: -116
Score: 3.5
Locus tag: null
null -116 3.5 AAGCAATTTGTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase subunit N
Cyanothece sp. ATCC 51142 cce_4534 -365 4.9 AAGTAAGTTTACCT
Cyanothece sp. PCC 8801 PCC8801_0789 -357 4.7 AAGCAACTTTACCT
Nostoc sp. PCC 7120 all5076 -7 3.7 AAGCAAAATGACCA
Synechocystis sp. PCC 6803 slr0750 -242 3.5 AATTAAAATTAATC