Propagation of PedR regulog to Prochlorococcus marinus sp. MIT9215
| Source regulog: | PedR - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | repressor (activator) |
| Biological process: | Photosynthesis; Carbon fixation |
| Effector: | Trx, thioredoxin protein |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Prochlorococcus marinus sp. MIT9215 |
| Orthologous TF(s) | MIT9215_1129 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -162
Score: 3.6 Sequence: GAGTATTTTAACTC
Locus tag: MIT9215_676
|
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| MIT9215_676 | -162 | 3.6 | GAGTATTTTAACTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlL | ||||
| Ortholog function: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | ||||
| Cyanothece sp. ATCC 51142 | cce_4532 | -155 | 4.3 | AAGCAATTTTTCTC |
| Cyanothece sp. PCC 8801 | PCC8801_0791 | -42 | 4.2 | AGGCAAATACACTT |
| Microcystis aeruginosa NIES-843 | MAE_16230 | -223 | 3.6 | AAGTAAATGTATAA |
| Synechocystis sp. PCC 6803 | slr0749 | -196 | 4.8 | AAGTAACTATACCC |
| -178 | 4 | AAGTTATTTTATTT | ||
|
Position: -121
Score: 3.7 Sequence: AAGTATTTAAACAT
Locus tag: MIT9215_674
|
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| MIT9215_674 | -121 | 3.7 | AAGTATTTAAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlN | ||||
| Ortholog function: Light-independent protochlorophyllide reductase subunit N | ||||
| Cyanothece sp. ATCC 51142 | cce_4534 | -365 | 4.9 | AAGTAAGTTTACCT |
| Cyanothece sp. PCC 8801 | PCC8801_0789 | -357 | 4.7 | AAGCAACTTTACCT |
| Nostoc sp. PCC 7120 | all5076 | -7 | 3.7 | AAGCAAAATGACCA |
| Synechocystis sp. PCC 6803 | slr0750 | -242 | 3.5 | AATTAAAATTAATC |
|
Position: -40
Score: 3.5 Sequence: AACTAAATATAGTA
Position: 16
Score: 3.4 Sequence: AAACAAATTTAGCT
Locus tag: MIT9215_440
|
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| MIT9215_440 | -40 | 3.5 | AACTAAATATAGTA | |
| 16 | 3.4 | AAACAAATTTAGCT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpe | ||||
| Ortholog function: Ribulose-phosphate 3-epimerase | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_1996 | -14 | 3.9 | GAGGAACTTTACCT |
| Cyanothece sp. PCC 8801 | PCC8801_1619 | -275 | 3.6 | AAGCAGCTATTCTG |
| Nostoc sp. PCC 7120 | alr0782 | -263 | 4.2 | AAGCATCAATACCG |
| Synechococcus sp. JA-3-3Ab | CYA_0084 | -109 | 3.5 | AACCATATTTTCTC |
| Synechocystis sp. PCC 6803 | sll0807 | -27 | 3.5 | GAGTTGAAATACTT |