Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Synechococcus elongatus PCC 7942

Reference regulog properties
Source regulog: Zur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus elongatus PCC 7942
Orthologous TF(s) Synpcc7942_0817
Regulated genes 3
Built upon 84 sites [see more]
Predicted regulatory interactions in Synechococcus elongatus PCC 7942
Locus tag Position Score Sequence
Position: -53
Score: 4.8
Sequence: ATGATAACGATTCTCAAGTTAAT
Locus tag: Synpcc7942_1316
Synpcc7942_1316 -53 4.8 ATGATAACGATTCTCAAGTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_1484
Ortholog function: Predicted Mn/Zn chelate ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_1484 -40 6.7 ACTAGAATGATTATCATTATCAT
Cyanothece sp. PCC 8801 PCC8801_0773 -40 7 ATTAGAATGATTATCATTATCAT
Cyanothece sp. PCC 7425 Cyan7425_0822 -29 5.2 TTGAAAATGAGAATGGTTCTTAT
Synechococcus elongatus PCC 7942 Synpcc7942_1316 -59 4.9 TAGGGAATGATAACGATTCTCAA
Position: -28
Score: 4.8
Sequence: ATTAACTTGAGAATCGTTATCAT
Position: -22
Score: 4.9
Sequence: TTGAGAATCGTTATCATTCCCTA
Locus tag: Synpcc7942_1317
Synpcc7942_1317 -28 4.8 ATTAACTTGAGAATCGTTATCAT
-22 4.9 TTGAGAATCGTTATCATTCCCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_1485
Ortholog function: Predicted Mn/Zn chelate ABC transporter, ATP-binding protein
Cyanothece sp. ATCC 51142 cce_1485 -31 6.7 ATGATAATGATAATCATTCTAGT
Cyanothece sp. PCC 8801 PCC8801_0774 -32 7 ATGATAATGATAATCATTCTAAT
Cyanothece sp. PCC 7425 Cyan7425_0794 -29 5.3 ATAAGAATTATTCTCATTTTCAC
Synechococcus elongatus PCC 7942 Synpcc7942_1317 -59 4.9 TAGGGAATGATAACGATTCTCAA
Position: -37
Score: 6.1
Sequence: ATGAGAATAATAATCATTTTTAG
Locus tag: Synpcc7942_1463
Synpcc7942_1463 -37 6.1 ATGAGAATAATAATCATTTTTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompZ
Ortholog function: Predicted zink uptake outer membrane protein
Synechococcus elongatus PCC 7942 Synpcc7942_1463 -37 6.1 ATGAGAATAATAATCATTTTTAG
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