Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PedR regulog to Acaryochloris marina MBIC11017

Reference regulog properties
Source regulog: PedR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Phylum: Cyanobacteria
Propagated regulon:
Target genome Acaryochloris marina MBIC11017
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 56 sites [see more]
Predicted regulatory interactions in Acaryochloris marina MBIC11017
Locus tag Position Score Sequence
Position: -178
Score: 3.4
Sequence: CAGTAAATATATAT
Position: -128
Score: 3.4
Sequence: AATTTATTTTTCCT
Position: -47
Score: 3.4
Sequence: AGTCAATAATGCTT
Locus tag: AM1_1539
AM1_1539 -178 3.4 CAGTAAATATATAT
-128 3.4 AATTTATTTTTCCT
-47 3.4 AGTCAATAATGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlB
Ortholog function: Light-independent protochlorophyllide reductase subunit B
Microcystis aeruginosa NIES-843 MAE_53860 -319 4.5 AAGCAAAATTACCG
Nostoc sp. PCC 7120 alr3441 -56 3.7 AAGCACTTATAGTC
Synechococcus sp. PCC 7002 SYNPCC7002_A1652 -14 4.6 GAGTAAAAATACCT
Synechocystis sp. PCC 6803 slr0772 -182 3.4 AAGCATTAAGAATT
Trichodesmium erythraeum IMS101 Tery_3812 -177 4.1 AGTTAAAAATACTT