Propagation of Fur regulog to Cyanothece sp. PCC 7424

Reference regulog properties
Source regulog:	Fur - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Cyanothece sp. PCC 7424
Orthologous TF(s)	PCC7424_3952
Regulated genes	34

Built upon 167 sites [see more]

Predicted regulatory interactions in *Cyanothece sp. PCC 7424*
	Locus tag	Position	Score	Sequence
Position: -324 Score: 2.9 Sequence: GCTTAGGATCAAACTCAAT Position: -181 Score: 3.8 Sequence: TTTGAGAAGGATTACTTAT Position: -175 Score: 3.1 Sequence: AAGGATTACTTATCTTACT Position: -50 Score: 3.1 Sequence: AAAGTGTATTAGCCTCATT Position: 11 Score: 3 Sequence: ATTTCCAAAATTTAGCCAG Locus tag: PCC7424_0399
	PCC7424_0399	-324	2.9	GCTTAGGATCAAACTCAAT
		-181	3.8	TTTGAGAAGGATTACTTAT
		-175	3.1	AAGGATTACTTATCTTACT
		-50	3.1	AAAGTGTATTAGCCTCATT
		11	3	ATTTCCAAAATTTAGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaB
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A2
Synechococcus sp. PCC 7002	SYNPCC7002_A1962	-206	3.4	AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142	cce_0990	-205	3.4	AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843	MAE_47570	-297	3.2	ATTAATAAACTTTTGTAAA
Gloeobacter violaceus PCC 7421	gvip471	-195	2.2	TTTTTAAAAATTGTTAAGT

Position: -70 Score: 3.4 Sequence: AACCCAAAAAATGAGCATT Position: -50 Score: 3.9 Sequence: ATAGAGTATTAGCCTCATT Position: -32 Score: 3 Sequence: TTTGAAATCAGGAAAAATT Position: 11 Score: 3 Sequence: ATTTCCAAAATTTAGCCAG Locus tag: PCC7424_0402
	PCC7424_0402	-70	3.4	AACCCAAAAAATGAGCATT
		-50	3.9	ATAGAGTATTAGCCTCATT
		-32	3	TTTGAAATCAGGAAAAATT
		11	3	ATTTCCAAAATTTAGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaB
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A2
Synechococcus sp. PCC 7002	SYNPCC7002_A1962	-206	3.4	AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142	cce_0990	-205	3.4	AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843	MAE_47570	-297	3.2	ATTAATAAACTTTTGTAAA
Gloeobacter violaceus PCC 7421	gvip471	-195	2.2	TTTTTAAAAATTGTTAAGT

Position: -103 Score: 3.5 Sequence: ATTAAAAAAAAGTCAAAAT Position: -83 Score: 3.3 Sequence: CTTGACGAATGCTTTTAAT Position: -67 Score: 3.4 Sequence: AATGTGTAACAAAATCTAT Position: -61 Score: 3 Sequence: TAACAAAATCTATCTCAAA Locus tag: PCC7424_0403
	PCC7424_0403	-103	3.5	ATTAAAAAAAAGTCAAAAT
		-83	3.3	CTTGACGAATGCTTTTAAT
		-67	3.4	AATGTGTAACAAAATCTAT
		-61	3	TAACAAAATCTATCTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002	SYNPCC7002_A1961	-206	3.4	AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142	cce_0989	-205	3.4	AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843	MAE_47560	-297	3.2	ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120	alr5154	-177	3.4	ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101	Tery_4669	-80	4	ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942	Synpcc7942_2049	-296	3.3	TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421	gvip470	-195	2.2	TTTTTAAAAATTGTTAAGT

Position: -334 Score: 3.5 Sequence: TATGAGTTTAAAAATTTAT Position: -299 Score: 3.2 Sequence: TTTGTAAATTTTTTGCTAA Position: -288 Score: 3.5 Sequence: TTTGCTAATAATGTTAAAA Position: -204 Score: 3.2 Sequence: TTTAAGAAAAGTTAATAAA Position: -84 Score: 3.3 Sequence: GTTGATGAAAATCCTATTT Position: -48 Score: 3.8 Sequence: ATTGAGAAATCTTGCCGTT Locus tag: PCC7424_0579
	PCC7424_0579	-334	3.5	TATGAGTTTAAAAATTTAT
		-299	3.2	TTTGTAAATTTTTTGCTAA
		-288	3.5	TTTGCTAATAATGTTAAAA
		-204	3.2	TTTAAGAAAAGTTAATAAA
		-84	3.3	GTTGATGAAAATCCTATTT
		-48	3.8	ATTGAGAAATCTTGCCGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803	sll0849	-298	3.3	AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142	cce_0660	-298	3.4	ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425	Cyan7425_5031	-91	3.1	GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843	MAE_41160	-274	2.9	ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab	CYA_2647	-106	3	TTTATTAATTTTTCGTAAG

Position: -108 Score: 5.4 Sequence: ATTGAAAAAAATTATCAAA Locus tag: PCC7424_0792
	PCC7424_0792	-108	5.4	ATTGAAAAAAATTATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Fe ABC transport system, substrate-binding protein
Cyanothece sp. PCC 8801	PCC8801_1444	-90	4	ATTAGGAATAATTAGCAAC
Microcystis aeruginosa NIES-843	MAE_56680	-61	4.9	GATAAGAATTATTCTCAAT

Position: -349 Score: 3.2 Sequence: AATTATTACAAACAACAAT Position: -345 Score: 3.2 Sequence: ATTACAAACAACAATTTTT Position: -342 Score: 3.2 Sequence: ACAAACAACAATTTTTATT Position: -179 Score: 3 Sequence: ATTAAAAGTTAAGTTAATT Locus tag: PCC7424_1261
	PCC7424_1261	-349	3.2	AATTATTACAAACAACAAT
		-345	3.2	ATTACAAACAACAATTTTT
		-342	3.2	ACAAACAACAATTTTTATT
		-179	3	ATTAAAAGTTAAGTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate-flavodoxin oxidoreductase
Synechococcus sp. PCC 7002	SYNPCC7002_A1443	-165	2.2	TTTTCTTATAACTTTTAGC
Cyanothece sp. PCC 8801	PCC8801_3918	-67	3.4	TTTGTCAATAATTTGTAAC
Microcystis aeruginosa NIES-843	MAE_38140	-292	3.9	ATTCTGAATATTAATTAAT
Nostoc sp. PCC 7120	alr2803	-92	3.8	ATTTTTAATCAGTATTAAT

Position: -85 Score: 4.4 Sequence: TTTGAGAAAGTTTCCTATT Position: -47 Score: 3.6 Sequence: AAAGAAAATGATAAGTTAT Locus tag: PCC7424_1278
	PCC7424_1278	-85	4.4	TTTGAGAAAGTTTCCTATT
		-47	3.6	AAAGAAAATGATAAGTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_A0871	-83	5.1	GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142	cce_3801	-163	4.2	ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425	Cyan7425_3510	-105	5.3	ATTGAGAATAATTTTCAAA
		-60	4	GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843	MAE_12460	-117	4.4	TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101	Tery_3222	-94	5.1	AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942	Synpcc7942_1406	-81	4.2	ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab	CYA_2794	-26	3.8	AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421	gll1012	-64	3.7	ATTGACAATTAATTGCAGC

Position: -250 Score: 3.1 Sequence: CAATACAATTATTACCTAT Position: -176 Score: 3 Sequence: TATTAAAATTTGTAACAAA Position: -143 Score: 3 Sequence: TTTGCAAATTGTGTCGAAT Position: -66 Score: 3.3 Sequence: ATTCATTTATTCATTCATT Locus tag: PCC7424_1436
	PCC7424_1436	-250	3.1	CAATACAATTATTACCTAT
		-176	3	TATTAAAATTTGTAACAAA
		-143	3	TTTGCAAATTGTGTCGAAT
		-66	3.3	ATTCATTTATTCATTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002	SYNPCC7002_A1018	-57	3.8	ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142	cce_4358	-183	2.7	AATAAATAATTTTTGTAAA
		-138	2.3	ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801	PCC8801_4320	-186	2.3	ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843	MAE_12190	-247	2.8	ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120	all4365	-272	2.9	GTTTTTTATTTTTTTCATC
		-232	3	AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101	Tery_3224	-65	3	GTTTAAAATTTTTTGATAT

Position: -336 Score: 3.3 Sequence: CTGGAAAACTAATAACTAT Position: -332 Score: 3.4 Sequence: AAAACTAATAACTATCATC Position: -329 Score: 2.9 Sequence: ACTAATAACTATCATCCTG Position: -314 Score: 3.1 Sequence: CCTGAAAACTGTTAACTGT Position: -307 Score: 3 Sequence: ACTGTTAACTGTTAACTCT Position: -290 Score: 3.2 Sequence: CTTCATGTCATTAGTCATT Position: -219 Score: 5.6 Sequence: ATTGCAAAATATTATCATT Position: -198 Score: 2.9 Sequence: AATCTAAAAAAAAGTTAAT Position: -147 Score: 3.1 Sequence: AAAAACAATAATAATAAAG Position: -138 Score: 3.2 Sequence: AATAATAAAGCTTGTATTT Position: -103 Score: 3.9 Sequence: TTTGTCAAAAAGTATAATT Position: -94 Score: 3.1 Sequence: AAGTATAATTTATAACTTT Position: -87 Score: 3.7 Sequence: ATTTATAACTTTTTTTATA Position: -84 Score: 3.6 Sequence: TATAACTTTTTTTATAAAT Position: -77 Score: 3 Sequence: TTTTTTATAAATAAGAATT Position: -74 Score: 3.3 Sequence: TTTATAAATAAGAATTATT Position: -68 Score: 5 Sequence: AATAAGAATTATTAGCATT Position: -35 Score: 3.3 Sequence: GTTAAAAAGAATTACAAAT Locus tag: PCC7424_1795
	PCC7424_1795	-336	3.3	CTGGAAAACTAATAACTAT
		-332	3.4	AAAACTAATAACTATCATC
		-329	2.9	ACTAATAACTATCATCCTG
		-314	3.1	CCTGAAAACTGTTAACTGT
		-307	3	ACTGTTAACTGTTAACTCT
		-290	3.2	CTTCATGTCATTAGTCATT
		-219	5.6	ATTGCAAAATATTATCATT
		-198	2.9	AATCTAAAAAAAAGTTAAT
		-147	3.1	AAAAACAATAATAATAAAG
		-138	3.2	AATAATAAAGCTTGTATTT
		-103	3.9	TTTGTCAAAAAGTATAATT
		-94	3.1	AAGTATAATTTATAACTTT
		-87	3.7	ATTTATAACTTTTTTTATA
		-84	3.6	TATAACTTTTTTTATAAAT
		-77	3	TTTTTTATAAATAAGAATT
		-74	3.3	TTTATAAATAAGAATTATT
		-68	5	AATAAGAATTATTAGCATT
		-35	3.3	GTTAAAAAGAATTACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Photosystem II chlorophyll-binding protein
Synechocystis sp. PCC 6803	sll0247	-269	2.8	ATTTCTTAATAATTTTAGT
Cyanothece sp. ATCC 51142	cce_1785	-18	4.4	ATTGCAAATCTTTTTAAAT
Cyanothece sp. PCC 7425	Cyan7425_2434	-61	4.7	ATTGAGTTTATTTCTCAAC
Nostoc sp. PCC 7120	all4001	-161	4.8	ATTAAGAATCTTTTTCAAT
Trichodesmium erythraeum IMS101	Tery_1667	-156	3.2	TTTTATAATTTCTTTTAAA
Synechococcus elongatus PCC 7942	Synpcc7942_1542	-45	5.2	ATTGAGAATTATTGTAAAT
Thermosynechococcus elongatus BP-1	null	-121	5.5	AATGCTATTAATTCTCAAT

Position: -321 Score: 3.6 Sequence: GAGAATAAAAATTCTCGAT Position: -300 Score: 2.9 Sequence: TTTGACAGCGACTTGCTCT Position: -192 Score: 3.1 Sequence: TATGATCACAAGTTATATT Position: -112 Score: 3.1 Sequence: CTTGCAATTCATTCCCACC Position: -35 Score: 3 Sequence: AGTTAGGAACATTAATAAT Position: -34 Score: 3.1 Sequence: GTTAGGAACATTAATAATT Locus tag: PCC7424_2202
	PCC7424_2202	-321	3.6	GAGAATAAAAATTCTCGAT
		-300	2.9	TTTGACAGCGACTTGCTCT
		-192	3.1	TATGATCACAAGTTATATT
		-112	3.1	CTTGCAATTCATTCCCACC
		-35	3	AGTTAGGAACATTAATAAT
		-34	3.1	GTTAGGAACATTAATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: Allophycocyanin, beta subunit
Synechococcus sp. PCC 7002	SYNPCC7002_A1631	-257	3.3	TTTTATTATTTTTTTTAAA
Cyanothece sp. ATCC 51142	cce_1944	-151	4.4	ATTGCTAAAATCTATAATT
Cyanothece sp. PCC 7425	Cyan7425_1838	-245	3	TTTTATATTATCTTTTAAC
Thermosynechococcus elongatus BP-1	null	-157	3.1	AATTATGAACTTTTGTAAT

Position: -308 Score: 3.5 Sequence: TTTCAATAAAGTTGCCAAT Position: -237 Score: 3 Sequence: TTAGAGATTTTTAAGGTTT Position: -193 Score: 3.1 Sequence: TTTGTTTTTTGATCGTATT Position: -186 Score: 3.1 Sequence: TTTGATCGTATTTAATATA Position: -183 Score: 3.1 Sequence: GATCGTATTTAATATAAAT Position: -163 Score: 3.8 Sequence: AAACAATAAAATTATTAAT Position: -162 Score: 3.3 Sequence: AACAATAAAATTATTAATT Position: -159 Score: 3.6 Sequence: AATAAAATTATTAATTTTT Position: -108 Score: 2.9 Sequence: TTTTAAAAGATTTTTAGTT Position: -96 Score: 2.9 Sequence: TTTAGTTTATTTTTGCATT Position: -17 Score: 3.9 Sequence: GTGAATAATGCTTCTCAAT Position: 8 Score: 3.8 Sequence: TAAAAAAAAACTTATCAAT Locus tag: PCC7424_2375
	PCC7424_2375	-308	3.5	TTTCAATAAAGTTGCCAAT
		-237	3	TTAGAGATTTTTAAGGTTT
		-193	3.1	TTTGTTTTTTGATCGTATT
		-186	3.1	TTTGATCGTATTTAATATA
		-183	3.1	GATCGTATTTAATATAAAT
		-163	3.8	AAACAATAAAATTATTAAT
		-162	3.3	AACAATAAAATTATTAATT
		-159	3.6	AATAAAATTATTAATTTTT
		-108	2.9	TTTTAAAAGATTTTTAGTT
		-96	2.9	TTTAGTTTATTTTTGCATT
		-17	3.9	GTGAATAATGCTTCTCAAT
		8	3.8	TAAAAAAAAACTTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_A2347	-126	3.6	TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803	slr0749	-173	3.3	ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801	PCC8801_0791	-242	2.7	ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843	MAE_16230	-150	2.8	ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1	null	-211	2.8	TTTTGTATTTTTGTTTAAT

Position: -46 Score: 3.2 Sequence: TTTCAATAGTTTTATTTTT Position: -1 Score: 4.2 Sequence: AATGAAGATAAAATTCAAT Position: 10 Score: 3.1 Sequence: AATTCAATAAATACACTTT Position: 31 Score: 2.9 Sequence: TTTTAAGTTTAACGTCAAT Locus tag: PCC7424_2389
	PCC7424_2389	-46	3.2	TTTCAATAGTTTTATTTTT
		-1	4.2	AATGAAGATAAAATTCAAT
		10	3.1	AATTCAATAAATACACTTT
		31	2.9	TTTTAAGTTTAACGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0089
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_G0089	-83	5.2	ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803	slr1485	-42	2.7	ACTGTGAAATTTATTTAAC
		-9	2.2	GTTTTAATAATGTTTAAAT

Position: -310 Score: 5.4 Sequence: ATTGATATTTTTTTTCATT Position: -294 Score: 4.1 Sequence: ATTAATATACAATATTAAT Position: -82 Score: 4.6 Sequence: ATTGCAAATAACTTGCATT Position: -37 Score: 4.1 Sequence: TCTGAGAATAATTTGCAAA Locus tag: PCC7424_2391
	PCC7424_2391	-310	5.4	ATTGATATTTTTTTTCATT
		-294	4.1	ATTAATATACAATATTAAT
		-82	4.6	ATTGCAAATAACTTGCATT
		-37	4.1	TCTGAGAATAATTTGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: Iron-siderophore complex transporter
Synechococcus sp. PCC 7002	SYNPCC7002_G0137	-279	4.2	ATTAAGAGATTATCTCAAT
Synechocystis sp. PCC 6803	sll1404	-286	4.6	TATGTGAAATATTATTATT
		-110	6	ATTGAAAATAGTTATCAAT
		-64	4.6	ATTGAGAATTACTCTTAAC
Cyanothece sp. PCC 8801	PCC8801_3017	-38	5.7	ATTGATAACTTTTCTCAAT
Cyanothece sp. PCC 7425	Cyan7425_2418	-264	4.6	ATTGATGATTATTTTCAAC

Position: -340 Score: 4.2 Sequence: ATAGACAATATTTATCTAA Position: -1 Score: 3.5 Sequence: CATGACAGCAACTATTTTT Locus tag: PCC7424_2820
	PCC7424_2820	-340	4.2	ATAGACAATATTTATCTAA
		-1	3.5	CATGACAGCAACTATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigC
Ortholog function: RNA polymerase sigma-subunit
Nostoc sp. PCC 7120	all1692	-320	3.5	AATAAACATAATTTTTACT

Position: -168 Score: 5.8 Sequence: ATTGAATATAATTCTCAAT Locus tag: PCC7424_2878
	PCC7424_2878	-168	5.8	ATTGAATATAATTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiB
Ortholog function: Flavodoxin
Cyanothece sp. ATCC 51142	cce_3031	-66	4.9	ATTGAGAATTATTCTAAAC
Nostoc sp. PCC 7120	alr2405	-235	5	ATTGAAATAAATATTCAAT
Synechococcus elongatus PCC 7942	Synpcc7942_1541	-45	5.2	ATTGAGAATTATTGTAAAT

Position: -260 Score: 3.6 Sequence: AATCTATTCTTTTCTCATT Position: -196 Score: 3.8 Sequence: GTTGATTAATTTTAAGATT Position: -184 Score: 3 Sequence: TAAGATTTTTTTAAGGATT Position: -141 Score: 3.4 Sequence: CTTTAATATAGTTAATATT Position: -125 Score: 2.9 Sequence: ATTAAGAAAAGTAACACTT Position: -98 Score: 3.8 Sequence: TTCGACTCTAATTATCCTT Position: -51 Score: 4.5 Sequence: AATGAGAAAGGATAACAAT Locus tag: PCC7424_2974
	PCC7424_2974	-260	3.6	AATCTATTCTTTTCTCATT
		-196	3.8	GTTGATTAATTTTAAGATT
		-184	3	TAAGATTTTTTTAAGGATT
		-141	3.4	CTTTAATATAGTTAATATT
		-125	2.9	ATTAAGAAAAGTAACACTT
		-98	3.8	TTCGACTCTAATTATCCTT
		-51	4.5	AATGAGAAAGGATAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803	sll0849	-298	3.3	AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142	cce_0660	-298	3.4	ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425	Cyan7425_5031	-91	3.1	GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843	MAE_41160	-274	2.9	ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab	CYA_2647	-106	3	TTTATTAATTTTTCGTAAG

Position: -60 Score: 3.5 Sequence: TTTAAAAAAACTTCATAAT Position: -50 Score: 2.9 Sequence: CTTCATAATTATTTAAGAT Position: -43 Score: 3.4 Sequence: ATTATTTAAGATAATAAAT Position: -7 Score: 3.4 Sequence: AGAGAAAATGTCTAGTATT Position: 15 Score: 3.1 Sequence: TTTGTTAAAGAAAATAAAG Locus tag: PCC7424_3497
	PCC7424_3497	-60	3.5	TTTAAAAAAACTTCATAAT
		-50	2.9	CTTCATAATTATTTAAGAT
		-43	3.4	ATTATTTAAGATAATAAAT
		-7	3.4	AGAGAAAATGTCTAGTATT
		15	3.1	TTTGTTAAAGAAAATAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdx
Ortholog function: Predicted ferredoxin
Cyanothece sp. ATCC 51142	cce_0892	-29	3	TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801	PCC8801_2860	-49	3.8	ATTGTAAAAAAATATTAAC
Trichodesmium erythraeum IMS101	Tery_4504	-35	2.6	GTTAATATTTTTTTATAAC

Position: -58 Score: 3.5 Sequence: CTCGATAATGATATTCTAA Locus tag: PCC7424_3498
	PCC7424_3498	-58	3.5	CTCGATAATGATATTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142	cce_0893	-29	3	TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801	PCC8801_2861	-49	3.8	ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120	asl0883	-90	3.5	ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab	CYA_0642	-92	2.8	ATTAAAAATATGATTTAAA

Position: -13 Score: 3.2 Sequence: ATTGGTGTGAATAATGATT Position: 27 Score: 3.3 Sequence: AACGCAAACTTTTTGCAAG Locus tag: PCC7424_3688
	PCC7424_3688	-13	3.2	ATTGGTGTGAATAATGATT
		27	3.3	AACGCAAACTTTTTGCAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaB
Ortholog function: Protoheme IX farnesyltransferase
Cyanothece sp. PCC 8801	PCC8801_0255	-185	2.2	TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843	MAE_22910	-282	2.5	TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_1781	-41	4.1	AATTATAACCAGTTTCAAT
Synechococcus elongatus PCC 7942	Synpcc7942_2600	-158	4.3	GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313	PMT1339	-30	2.6	ATTTAAATTATTTTATTGT

Position: -324 Score: 3 Sequence: ATAGATTTAACTTACCCAT Position: -259 Score: 3.5 Sequence: AAAGAAAAAATTAATATTT Position: -251 Score: 3.7 Sequence: AATTAATATTTTACTCAAC Position: -25 Score: 3 Sequence: TACGAGAACAAGTAATTTT Position: -1 Score: 3.7 Sequence: TATGACAGAGTCTATCCTT Locus tag: PCC7424_3689
	PCC7424_3689	-324	3	ATAGATTTAACTTACCCAT
		-259	3.5	AAAGAAAAAATTAATATTT
		-251	3.7	AATTAATATTTTACTCAAC
		-25	3	TACGAGAACAAGTAATTTT
		-1	3.7	TATGACAGAGTCTATCCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801	PCC8801_0256	-185	2.2	TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843	MAE_22920	-282	2.5	TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_1780	-278	3.5	ATTGTTAAAATTATGAAAT
		-167	3.3	ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942	Synpcc7942_2601	-158	4.3	GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313	PMT1340	-30	2.6	ATTTAAATTATTTTATTGT

Position: -95 Score: 5.4 Sequence: GATGATAACTATTCTCAAT Position: -46 Score: 3.9 Sequence: AATCGCTATGATTGTCAAT Locus tag: PCC7424_3952
	PCC7424_3952	-95	5.4	GATGATAACTATTCTCAAT
		-46	3.9	AATCGCTATGATTGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Ferric uptake regulator, Fur family
Synechococcus sp. PCC 7002	SYNPCC7002_A1649	-88	3.5	GTTAGTATTTATTTGCAAT
Cyanothece sp. ATCC 51142	cce_2330	-96	5.1	GTTGCTAATTATTTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0870	-97	4.6	GTTGCAAATTATTTGCAAT
Trichodesmium erythraeum IMS101	Tery_1958	-44	4.7	ATTGTGTATCATTGTCAAT
Thermosynechococcus elongatus BP-1	null	-59	4.4	CATTGTAATTATTCTCAAT

Position: -118 Score: 3.2 Sequence: GTTAAGATGACTTAACATT Position: -99 Score: 3.2 Sequence: TAGCAATAAAACTTTCATT Position: -68 Score: 3 Sequence: CTTGATAAACTGTTACATA Position: -51 Score: 2.9 Sequence: TACAGCAATAATTATTAAA Locus tag: PCC7424_4005
	PCC7424_4005	-118	3.2	GTTAAGATGACTTAACATT
		-99	3.2	TAGCAATAAAACTTTCATT
		-68	3	CTTGATAAACTGTTACATA
		-51	2.9	TACAGCAATAATTATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0913
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_A0913	-146	2.2	TTTTTACAACATTTTTAAA
		-68	3.8	AATGAGAAAATTTTGATAT
Synechocystis sp. PCC 6803	sll1911	-59	4.2	GTTGTTAAAATTTAACAAT
Cyanothece sp. ATCC 51142	cce_0019	-75	3.1	TTTTTTAATATTTTTTGAT
Cyanothece sp. PCC 8801	PCC8801_2812	-67	4.4	TATGATAAAATTTATTAAA
Trichodesmium erythraeum IMS101	Tery_4773	-64	2.4	TTTATGAAATATTTATGAT

Position: -349 Score: 4.4 Sequence: TTTGACAAAATTTAATATT Position: -286 Score: 3.3 Sequence: TATGACAAAAGCTTTACAT Position: -276 Score: 3.3 Sequence: GCTTTACATAATTCTCATT Position: -166 Score: 3.3 Sequence: ATTTAGAAAAGGTAACAAA Locus tag: PCC7424_4071
	PCC7424_4071	-349	4.4	TTTGACAAAATTTAATATT
		-286	3.3	TATGACAAAAGCTTTACAT
		-276	3.3	GCTTTACATAATTCTCATT
		-166	3.3	ATTTAGAAAAGGTAACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase, subunit II
Cyanothece sp. ATCC 51142	cce_1977	-136	3.7	AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0567	-152	2.7	TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843	MAE_22930	-216	2.5	TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120	alr0950	-134	3.7	TTTACTCAAGATTATTAAT

Position: -13 Score: 3 Sequence: GTTCAGCTAAATTATGACT Locus tag: PCC7424_4072
	PCC7424_4072	-13	3	GTTCAGCTAAATTATGACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxA
Ortholog function: Cytochrome c oxidase, subunit I
Cyanothece sp. ATCC 51142	cce_1976	-136	3.7	AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0568	-152	2.7	TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843	MAE_22940	-216	2.5	TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120	alr0951	-134	3.7	TTTACTCAAGATTATTAAT

Position: -50 Score: 3.3 Sequence: ATGACTAATTATTAAAAAT Position: -24 Score: 3.3 Sequence: CATAAAACTAACCATCAAT Locus tag: PCC7424_4073
	PCC7424_4073	-50	3.3	ATGACTAATTATTAAAAAT
		-24	3.3	CATAAAACTAACCATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase, subunit III
Cyanothece sp. ATCC 51142	cce_1975	-136	3.7	AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0569	-152	2.7	TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843	MAE_22950	-216	2.5	TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120	alr2516	-190	3	AgTTAaAAagtTaaTaAgT

Position: -275 Score: 3.2 Sequence: TCTGTGTGCCATACTCAAT Position: -271 Score: 3.2 Sequence: TGTGCCATACTCAATCAAT Position: -158 Score: 3.1 Sequence: ACTTAGAAGTGTTATATTT Position: -120 Score: 3.3 Sequence: GTAGCTTATTTTACTTATT Position: -81 Score: 3.5 Sequence: TATTCCTTACTTTATCATT Position: -6 Score: 3 Sequence: TTGACTATGACTTCTCAAT Position: 24 Score: 3.3 Sequence: CTTAAAAATCTAGGTCAAT Locus tag: PCC7424_4322
	PCC7424_4322	-275	3.2	TCTGTGTGCCATACTCAAT
		-271	3.2	TGTGCCATACTCAATCAAT
		-158	3.1	ACTTAGAAGTGTTATATTT
		-120	3.3	GTAGCTTATTTTACTTATT
		-81	3.5	TATTCCTTACTTTATCATT
		-6	3	TTGACTATGACTTCTCAAT
		24	3.3	CTTAAAAATCTAGGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2351
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_A2351	-216	2.9	TTTATTATTGTTTTTTAGT
Cyanothece sp. ATCC 51142	cce_3809	-132	3.2	GTTTTTATTTTCTGTCAAT
Cyanothece sp. PCC 8801	PCC8801_2575	-247	3.1	ATTTCTCCTTATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_2644	-122	4.2	AATTAGATTAATTTTGAAT

Position: -218 Score: 3.4 Sequence: CGTGAGAGTAGTTGGCTTT Position: -158 Score: 4.8 Sequence: AACGAAAATTATTCTCAAC Position: -135 Score: 4 Sequence: TTTTAAAATTTGACTCATT Locus tag: PCC7424_5224
	PCC7424_5224	-218	3.4	CGTGAGAGTAGTTGGCTTT
		-158	4.8	AACGAAAATTATTCTCAAC
		-135	4	TTTTAAAATTTGACTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dpsA
Ortholog function: Nutrient stress-induced DNA-binding protein
Cyanothece sp. ATCC 51142	cce_0479	-144	4.7	GATGCAATATATTCTCAAT
Nostoc sp. PCC 7120	alr3808	-204	3.5	GTTTAGAAATTATTGCAAT

Position: -43 Score: 3.6 Sequence: AAGGATAAAGTAGTTCAAT Position: 0 Score: 3.8 Sequence: GTGGAAAAATTTAATTATT Locus tag: PCC7424_5711
	PCC7424_5711	-43	3.6	AAGGATAAAGTAGTTCAAT
		0	3.8	GTGGAAAAATTTAATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sll1407
Ortholog function: Predicted methyltransferase
Synechocystis sp. PCC 6803	sll1407	-38	3.4	ATTAATAAAACTTTTTAAC

Position: 18 Score: 5.2 Sequence: AATGAGAATAATTCTTTTT Locus tag: PCC7424_5747
	PCC7424_5747	18	5.2	AATGAGAATAATTCTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecD
Ortholog function: Fe(3+) dicitrate ABC transport system, permease protein 2
Synechococcus sp. PCC 7002	SYNPCC7002_G0087	-83	5.2	ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803	slr1317	-78	4.2	ATTGATAATCTTTCCTAGT
Nostoc sp. PCC 7120	all2585	-100	4.6	TCTTATATTAATTCTCAAT
		-32	5	AATGACTATATTTTTCAAT

Position: -106 Score: 4.3 Sequence: CTTGACAAAAATTCTAAGT Position: -64 Score: 5.3 Sequence: TATGAAAAAGTTTCTCAAT Locus tag: PCC7424_5748
	PCC7424_5748	-106	4.3	CTTGACAAAAATTCTAAGT
		-64	5.3	TATGAAAAAGTTTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecC
Ortholog function: Fe(3+) dicitrate ABC transport system, permease protein 1
Synechococcus sp. PCC 7002	SYNPCC7002_G0088	-83	5.2	ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803	slr1316	-78	4.2	ATTGATAATCTTTCCTAGT
Nostoc sp. PCC 7120	all2586	-100	4.6	TCTTATATTAATTCTCAAT
		-32	5	AATGACTATATTTTTCAAT

Position: 25 Score: 3.5 Sequence: ATTGCCGTTTTTGTTCAAT Locus tag: PCC7424_5760
	PCC7424_5760	25	3.5	ATTGCCGTTTTTGTTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sll1203
Ortholog function: Conserved unknown protein
Synechocystis sp. PCC 6803	sll1203	-38	3.4	ATTAATAAAACTTTTTAAC
Nostoc sp. PCC 7120	alr2187	-69	4.3	TTTGCAAAAAATTATTAAC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fur regulog to Cyanothece sp. PCC 7424

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --