Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Cyanothece sp. PCC 7424

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. PCC 7424
Orthologous TF(s) PCC7424_3952
Regulated genes 34
Built upon 167 sites [see more]
Predicted regulatory interactions in Cyanothece sp. PCC 7424
Locus tag Position Score Sequence
Position: -324
Score: 2.9
Sequence: GCTTAGGATCAAACTCAAT
Position: -181
Score: 3.8
Sequence: TTTGAGAAGGATTACTTAT
Position: -175
Score: 3.1
Sequence: AAGGATTACTTATCTTACT
Position: -50
Score: 3.1
Sequence: AAAGTGTATTAGCCTCATT
Position: 11
Score: 3
Sequence: ATTTCCAAAATTTAGCCAG
Locus tag: PCC7424_0399
PCC7424_0399 -324 2.9 GCTTAGGATCAAACTCAAT
-181 3.8 TTTGAGAAGGATTACTTAT
-175 3.1 AAGGATTACTTATCTTACT
-50 3.1 AAAGTGTATTAGCCTCATT
11 3 ATTTCCAAAATTTAGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaB
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A2
Synechococcus sp. PCC 7002 SYNPCC7002_A1962 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0990 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47570 -297 3.2 ATTAATAAACTTTTGTAAA
Gloeobacter violaceus PCC 7421 gvip471 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -70
Score: 3.4
Sequence: AACCCAAAAAATGAGCATT
Position: -50
Score: 3.9
Sequence: ATAGAGTATTAGCCTCATT
Position: -32
Score: 3
Sequence: TTTGAAATCAGGAAAAATT
Position: 11
Score: 3
Sequence: ATTTCCAAAATTTAGCCAG
Locus tag: PCC7424_0402
PCC7424_0402 -70 3.4 AACCCAAAAAATGAGCATT
-50 3.9 ATAGAGTATTAGCCTCATT
-32 3 TTTGAAATCAGGAAAAATT
11 3 ATTTCCAAAATTTAGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaB
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A2
Synechococcus sp. PCC 7002 SYNPCC7002_A1962 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0990 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47570 -297 3.2 ATTAATAAACTTTTGTAAA
Gloeobacter violaceus PCC 7421 gvip471 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -103
Score: 3.5
Sequence: ATTAAAAAAAAGTCAAAAT
Position: -83
Score: 3.3
Sequence: CTTGACGAATGCTTTTAAT
Position: -67
Score: 3.4
Sequence: AATGTGTAACAAAATCTAT
Position: -61
Score: 3
Sequence: TAACAAAATCTATCTCAAA
Locus tag: PCC7424_0403
PCC7424_0403 -103 3.5 ATTAAAAAAAAGTCAAAAT
-83 3.3 CTTGACGAATGCTTTTAAT
-67 3.4 AATGTGTAACAAAATCTAT
-61 3 TAACAAAATCTATCTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -334
Score: 3.5
Sequence: TATGAGTTTAAAAATTTAT
Position: -299
Score: 3.2
Sequence: TTTGTAAATTTTTTGCTAA
Position: -288
Score: 3.5
Sequence: TTTGCTAATAATGTTAAAA
Position: -204
Score: 3.2
Sequence: TTTAAGAAAAGTTAATAAA
Position: -84
Score: 3.3
Sequence: GTTGATGAAAATCCTATTT
Position: -48
Score: 3.8
Sequence: ATTGAGAAATCTTGCCGTT
Locus tag: PCC7424_0579
PCC7424_0579 -334 3.5 TATGAGTTTAAAAATTTAT
-299 3.2 TTTGTAAATTTTTTGCTAA
-288 3.5 TTTGCTAATAATGTTAAAA
-204 3.2 TTTAAGAAAAGTTAATAAA
-84 3.3 GTTGATGAAAATCCTATTT
-48 3.8 ATTGAGAAATCTTGCCGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -108
Score: 5.4
Sequence: ATTGAAAAAAATTATCAAA
Locus tag: PCC7424_0792
PCC7424_0792 -108 5.4 ATTGAAAAAAATTATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Fe ABC transport system, substrate-binding protein
Cyanothece sp. PCC 8801 PCC8801_1444 -90 4 ATTAGGAATAATTAGCAAC
Microcystis aeruginosa NIES-843 MAE_56680 -61 4.9 GATAAGAATTATTCTCAAT
Position: -349
Score: 3.2
Sequence: AATTATTACAAACAACAAT
Position: -345
Score: 3.2
Sequence: ATTACAAACAACAATTTTT
Position: -342
Score: 3.2
Sequence: ACAAACAACAATTTTTATT
Position: -179
Score: 3
Sequence: ATTAAAAGTTAAGTTAATT
Locus tag: PCC7424_1261
PCC7424_1261 -349 3.2 AATTATTACAAACAACAAT
-345 3.2 ATTACAAACAACAATTTTT
-342 3.2 ACAAACAACAATTTTTATT
-179 3 ATTAAAAGTTAAGTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate-flavodoxin oxidoreductase
Synechococcus sp. PCC 7002 SYNPCC7002_A1443 -165 2.2 TTTTCTTATAACTTTTAGC
Cyanothece sp. PCC 8801 PCC8801_3918 -67 3.4 TTTGTCAATAATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_38140 -292 3.9 ATTCTGAATATTAATTAAT
Nostoc sp. PCC 7120 alr2803 -92 3.8 ATTTTTAATCAGTATTAAT
Position: -85
Score: 4.4
Sequence: TTTGAGAAAGTTTCCTATT
Position: -47
Score: 3.6
Sequence: AAAGAAAATGATAAGTTAT
Locus tag: PCC7424_1278
PCC7424_1278 -85 4.4 TTTGAGAAAGTTTCCTATT
-47 3.6 AAAGAAAATGATAAGTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0871 -83 5.1 GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142 cce_3801 -163 4.2 ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425 Cyan7425_3510 -105 5.3 ATTGAGAATAATTTTCAAA
-60 4 GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843 MAE_12460 -117 4.4 TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101 Tery_3222 -94 5.1 AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_1406 -81 4.2 ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab CYA_2794 -26 3.8 AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421 gll1012 -64 3.7 ATTGACAATTAATTGCAGC
Position: -250
Score: 3.1
Sequence: CAATACAATTATTACCTAT
Position: -176
Score: 3
Sequence: TATTAAAATTTGTAACAAA
Position: -143
Score: 3
Sequence: TTTGCAAATTGTGTCGAAT
Position: -66
Score: 3.3
Sequence: ATTCATTTATTCATTCATT
Locus tag: PCC7424_1436
PCC7424_1436 -250 3.1 CAATACAATTATTACCTAT
-176 3 TATTAAAATTTGTAACAAA
-143 3 TTTGCAAATTGTGTCGAAT
-66 3.3 ATTCATTTATTCATTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
Position: -336
Score: 3.3
Sequence: CTGGAAAACTAATAACTAT
Position: -332
Score: 3.4
Sequence: AAAACTAATAACTATCATC
Position: -329
Score: 2.9
Sequence: ACTAATAACTATCATCCTG
Position: -314
Score: 3.1
Sequence: CCTGAAAACTGTTAACTGT
Position: -307
Score: 3
Sequence: ACTGTTAACTGTTAACTCT
Position: -290
Score: 3.2
Sequence: CTTCATGTCATTAGTCATT
Position: -219
Score: 5.6
Sequence: ATTGCAAAATATTATCATT
Position: -198
Score: 2.9
Sequence: AATCTAAAAAAAAGTTAAT
Position: -147
Score: 3.1
Sequence: AAAAACAATAATAATAAAG
Position: -138
Score: 3.2
Sequence: AATAATAAAGCTTGTATTT
Position: -103
Score: 3.9
Sequence: TTTGTCAAAAAGTATAATT
Position: -94
Score: 3.1
Sequence: AAGTATAATTTATAACTTT
Position: -87
Score: 3.7
Sequence: ATTTATAACTTTTTTTATA
Position: -84
Score: 3.6
Sequence: TATAACTTTTTTTATAAAT
Position: -77
Score: 3
Sequence: TTTTTTATAAATAAGAATT
Position: -74
Score: 3.3
Sequence: TTTATAAATAAGAATTATT
Position: -68
Score: 5
Sequence: AATAAGAATTATTAGCATT
Position: -35
Score: 3.3
Sequence: GTTAAAAAGAATTACAAAT
Locus tag: PCC7424_1795
PCC7424_1795 -336 3.3 CTGGAAAACTAATAACTAT
-332 3.4 AAAACTAATAACTATCATC
-329 2.9 ACTAATAACTATCATCCTG
-314 3.1 CCTGAAAACTGTTAACTGT
-307 3 ACTGTTAACTGTTAACTCT
-290 3.2 CTTCATGTCATTAGTCATT
-219 5.6 ATTGCAAAATATTATCATT
-198 2.9 AATCTAAAAAAAAGTTAAT
-147 3.1 AAAAACAATAATAATAAAG
-138 3.2 AATAATAAAGCTTGTATTT
-103 3.9 TTTGTCAAAAAGTATAATT
-94 3.1 AAGTATAATTTATAACTTT
-87 3.7 ATTTATAACTTTTTTTATA
-84 3.6 TATAACTTTTTTTATAAAT
-77 3 TTTTTTATAAATAAGAATT
-74 3.3 TTTATAAATAAGAATTATT
-68 5 AATAAGAATTATTAGCATT
-35 3.3 GTTAAAAAGAATTACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Photosystem II chlorophyll-binding protein
Synechocystis sp. PCC 6803 sll0247 -269 2.8 ATTTCTTAATAATTTTAGT
Cyanothece sp. ATCC 51142 cce_1785 -18 4.4 ATTGCAAATCTTTTTAAAT
Cyanothece sp. PCC 7425 Cyan7425_2434 -61 4.7 ATTGAGTTTATTTCTCAAC
Nostoc sp. PCC 7120 all4001 -161 4.8 ATTAAGAATCTTTTTCAAT
Trichodesmium erythraeum IMS101 Tery_1667 -156 3.2 TTTTATAATTTCTTTTAAA
Synechococcus elongatus PCC 7942 Synpcc7942_1542 -45 5.2 ATTGAGAATTATTGTAAAT
Thermosynechococcus elongatus BP-1 null -121 5.5 AATGCTATTAATTCTCAAT
Position: -321
Score: 3.6
Sequence: GAGAATAAAAATTCTCGAT
Position: -300
Score: 2.9
Sequence: TTTGACAGCGACTTGCTCT
Position: -192
Score: 3.1
Sequence: TATGATCACAAGTTATATT
Position: -112
Score: 3.1
Sequence: CTTGCAATTCATTCCCACC
Position: -35
Score: 3
Sequence: AGTTAGGAACATTAATAAT
Position: -34
Score: 3.1
Sequence: GTTAGGAACATTAATAATT
Locus tag: PCC7424_2202
PCC7424_2202 -321 3.6 GAGAATAAAAATTCTCGAT
-300 2.9 TTTGACAGCGACTTGCTCT
-192 3.1 TATGATCACAAGTTATATT
-112 3.1 CTTGCAATTCATTCCCACC
-35 3 AGTTAGGAACATTAATAAT
-34 3.1 GTTAGGAACATTAATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: Allophycocyanin, beta subunit
Synechococcus sp. PCC 7002 SYNPCC7002_A1631 -257 3.3 TTTTATTATTTTTTTTAAA
Cyanothece sp. ATCC 51142 cce_1944 -151 4.4 ATTGCTAAAATCTATAATT
Cyanothece sp. PCC 7425 Cyan7425_1838 -245 3 TTTTATATTATCTTTTAAC
Thermosynechococcus elongatus BP-1 null -157 3.1 AATTATGAACTTTTGTAAT
Position: -308
Score: 3.5
Sequence: TTTCAATAAAGTTGCCAAT
Position: -237
Score: 3
Sequence: TTAGAGATTTTTAAGGTTT
Position: -193
Score: 3.1
Sequence: TTTGTTTTTTGATCGTATT
Position: -186
Score: 3.1
Sequence: TTTGATCGTATTTAATATA
Position: -183
Score: 3.1
Sequence: GATCGTATTTAATATAAAT
Position: -163
Score: 3.8
Sequence: AAACAATAAAATTATTAAT
Position: -162
Score: 3.3
Sequence: AACAATAAAATTATTAATT
Position: -159
Score: 3.6
Sequence: AATAAAATTATTAATTTTT
Position: -108
Score: 2.9
Sequence: TTTTAAAAGATTTTTAGTT
Position: -96
Score: 2.9
Sequence: TTTAGTTTATTTTTGCATT
Position: -17
Score: 3.9
Sequence: GTGAATAATGCTTCTCAAT
Position: 8
Score: 3.8
Sequence: TAAAAAAAAACTTATCAAT
Locus tag: PCC7424_2375
PCC7424_2375 -308 3.5 TTTCAATAAAGTTGCCAAT
-237 3 TTAGAGATTTTTAAGGTTT
-193 3.1 TTTGTTTTTTGATCGTATT
-186 3.1 TTTGATCGTATTTAATATA
-183 3.1 GATCGTATTTAATATAAAT
-163 3.8 AAACAATAAAATTATTAAT
-162 3.3 AACAATAAAATTATTAATT
-159 3.6 AATAAAATTATTAATTTTT
-108 2.9 TTTTAAAAGATTTTTAGTT
-96 2.9 TTTAGTTTATTTTTGCATT
-17 3.9 GTGAATAATGCTTCTCAAT
8 3.8 TAAAAAAAAACTTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -46
Score: 3.2
Sequence: TTTCAATAGTTTTATTTTT
Position: -1
Score: 4.2
Sequence: AATGAAGATAAAATTCAAT
Position: 10
Score: 3.1
Sequence: AATTCAATAAATACACTTT
Position: 31
Score: 2.9
Sequence: TTTTAAGTTTAACGTCAAT
Locus tag: PCC7424_2389
PCC7424_2389 -46 3.2 TTTCAATAGTTTTATTTTT
-1 4.2 AATGAAGATAAAATTCAAT
10 3.1 AATTCAATAAATACACTTT
31 2.9 TTTTAAGTTTAACGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0089
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_G0089 -83 5.2 ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803 slr1485 -42 2.7 ACTGTGAAATTTATTTAAC
-9 2.2 GTTTTAATAATGTTTAAAT
Position: -310
Score: 5.4
Sequence: ATTGATATTTTTTTTCATT
Position: -294
Score: 4.1
Sequence: ATTAATATACAATATTAAT
Position: -82
Score: 4.6
Sequence: ATTGCAAATAACTTGCATT
Position: -37
Score: 4.1
Sequence: TCTGAGAATAATTTGCAAA
Locus tag: PCC7424_2391
PCC7424_2391 -310 5.4 ATTGATATTTTTTTTCATT
-294 4.1 ATTAATATACAATATTAAT
-82 4.6 ATTGCAAATAACTTGCATT
-37 4.1 TCTGAGAATAATTTGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: Iron-siderophore complex transporter
Synechococcus sp. PCC 7002 SYNPCC7002_G0137 -279 4.2 ATTAAGAGATTATCTCAAT
Synechocystis sp. PCC 6803 sll1404 -286 4.6 TATGTGAAATATTATTATT
-110 6 ATTGAAAATAGTTATCAAT
-64 4.6 ATTGAGAATTACTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_3017 -38 5.7 ATTGATAACTTTTCTCAAT
Cyanothece sp. PCC 7425 Cyan7425_2418 -264 4.6 ATTGATGATTATTTTCAAC
Position: -340
Score: 4.2
Sequence: ATAGACAATATTTATCTAA
Position: -1
Score: 3.5
Sequence: CATGACAGCAACTATTTTT
Locus tag: PCC7424_2820
PCC7424_2820 -340 4.2 ATAGACAATATTTATCTAA
-1 3.5 CATGACAGCAACTATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigC
Ortholog function: RNA polymerase sigma-subunit
Nostoc sp. PCC 7120 all1692 -320 3.5 AATAAACATAATTTTTACT
Position: -168
Score: 5.8
Sequence: ATTGAATATAATTCTCAAT
Locus tag: PCC7424_2878
PCC7424_2878 -168 5.8 ATTGAATATAATTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiB
Ortholog function: Flavodoxin
Cyanothece sp. ATCC 51142 cce_3031 -66 4.9 ATTGAGAATTATTCTAAAC
Nostoc sp. PCC 7120 alr2405 -235 5 ATTGAAATAAATATTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_1541 -45 5.2 ATTGAGAATTATTGTAAAT
Position: -260
Score: 3.6
Sequence: AATCTATTCTTTTCTCATT
Position: -196
Score: 3.8
Sequence: GTTGATTAATTTTAAGATT
Position: -184
Score: 3
Sequence: TAAGATTTTTTTAAGGATT
Position: -141
Score: 3.4
Sequence: CTTTAATATAGTTAATATT
Position: -125
Score: 2.9
Sequence: ATTAAGAAAAGTAACACTT
Position: -98
Score: 3.8
Sequence: TTCGACTCTAATTATCCTT
Position: -51
Score: 4.5
Sequence: AATGAGAAAGGATAACAAT
Locus tag: PCC7424_2974
PCC7424_2974 -260 3.6 AATCTATTCTTTTCTCATT
-196 3.8 GTTGATTAATTTTAAGATT
-184 3 TAAGATTTTTTTAAGGATT
-141 3.4 CTTTAATATAGTTAATATT
-125 2.9 ATTAAGAAAAGTAACACTT
-98 3.8 TTCGACTCTAATTATCCTT
-51 4.5 AATGAGAAAGGATAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -60
Score: 3.5
Sequence: TTTAAAAAAACTTCATAAT
Position: -50
Score: 2.9
Sequence: CTTCATAATTATTTAAGAT
Position: -43
Score: 3.4
Sequence: ATTATTTAAGATAATAAAT
Position: -7
Score: 3.4
Sequence: AGAGAAAATGTCTAGTATT
Position: 15
Score: 3.1
Sequence: TTTGTTAAAGAAAATAAAG
Locus tag: PCC7424_3497
PCC7424_3497 -60 3.5 TTTAAAAAAACTTCATAAT
-50 2.9 CTTCATAATTATTTAAGAT
-43 3.4 ATTATTTAAGATAATAAAT
-7 3.4 AGAGAAAATGTCTAGTATT
15 3.1 TTTGTTAAAGAAAATAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdx
Ortholog function: Predicted ferredoxin
Cyanothece sp. ATCC 51142 cce_0892 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2860 -49 3.8 ATTGTAAAAAAATATTAAC
Trichodesmium erythraeum IMS101 Tery_4504 -35 2.6 GTTAATATTTTTTTATAAC
Position: -58
Score: 3.5
Sequence: CTCGATAATGATATTCTAA
Locus tag: PCC7424_3498
PCC7424_3498 -58 3.5 CTCGATAATGATATTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbM
Ortholog function: Photosystem II reaction center M protein
Cyanothece sp. ATCC 51142 cce_0893 -29 3 TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_2861 -49 3.8 ATTGTAAAAAAATATTAAC
Nostoc sp. PCC 7120 asl0883 -90 3.5 ATTCTTAATTTTTTGTAAT
Synechococcus sp. JA-3-3Ab CYA_0642 -92 2.8 ATTAAAAATATGATTTAAA
Position: -13
Score: 3.2
Sequence: ATTGGTGTGAATAATGATT
Position: 27
Score: 3.3
Sequence: AACGCAAACTTTTTGCAAG
Locus tag: PCC7424_3688
PCC7424_3688 -13 3.2 ATTGGTGTGAATAATGATT
27 3.3 AACGCAAACTTTTTGCAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaB
Ortholog function: Protoheme IX farnesyltransferase
Cyanothece sp. PCC 8801 PCC8801_0255 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22910 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1781 -41 4.1 AATTATAACCAGTTTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_2600 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1339 -30 2.6 ATTTAAATTATTTTATTGT
Position: -324
Score: 3
Sequence: ATAGATTTAACTTACCCAT
Position: -259
Score: 3.5
Sequence: AAAGAAAAAATTAATATTT
Position: -251
Score: 3.7
Sequence: AATTAATATTTTACTCAAC
Position: -25
Score: 3
Sequence: TACGAGAACAAGTAATTTT
Position: -1
Score: 3.7
Sequence: TATGACAGAGTCTATCCTT
Locus tag: PCC7424_3689
PCC7424_3689 -324 3 ATAGATTTAACTTACCCAT
-259 3.5 AAAGAAAAAATTAATATTT
-251 3.7 AATTAATATTTTACTCAAC
-25 3 TACGAGAACAAGTAATTTT
-1 3.7 TATGACAGAGTCTATCCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: -95
Score: 5.4
Sequence: GATGATAACTATTCTCAAT
Position: -46
Score: 3.9
Sequence: AATCGCTATGATTGTCAAT
Locus tag: PCC7424_3952
PCC7424_3952 -95 5.4 GATGATAACTATTCTCAAT
-46 3.9 AATCGCTATGATTGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Ferric uptake regulator, Fur family
Synechococcus sp. PCC 7002 SYNPCC7002_A1649 -88 3.5 GTTAGTATTTATTTGCAAT
Cyanothece sp. ATCC 51142 cce_2330 -96 5.1 GTTGCTAATTATTTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0870 -97 4.6 GTTGCAAATTATTTGCAAT
Trichodesmium erythraeum IMS101 Tery_1958 -44 4.7 ATTGTGTATCATTGTCAAT
Thermosynechococcus elongatus BP-1 null -59 4.4 CATTGTAATTATTCTCAAT
Position: -118
Score: 3.2
Sequence: GTTAAGATGACTTAACATT
Position: -99
Score: 3.2
Sequence: TAGCAATAAAACTTTCATT
Position: -68
Score: 3
Sequence: CTTGATAAACTGTTACATA
Position: -51
Score: 2.9
Sequence: TACAGCAATAATTATTAAA
Locus tag: PCC7424_4005
PCC7424_4005 -118 3.2 GTTAAGATGACTTAACATT
-99 3.2 TAGCAATAAAACTTTCATT
-68 3 CTTGATAAACTGTTACATA
-51 2.9 TACAGCAATAATTATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0913
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0913 -146 2.2 TTTTTACAACATTTTTAAA
-68 3.8 AATGAGAAAATTTTGATAT
Synechocystis sp. PCC 6803 sll1911 -59 4.2 GTTGTTAAAATTTAACAAT
Cyanothece sp. ATCC 51142 cce_0019 -75 3.1 TTTTTTAATATTTTTTGAT
Cyanothece sp. PCC 8801 PCC8801_2812 -67 4.4 TATGATAAAATTTATTAAA
Trichodesmium erythraeum IMS101 Tery_4773 -64 2.4 TTTATGAAATATTTATGAT
Position: -349
Score: 4.4
Sequence: TTTGACAAAATTTAATATT
Position: -286
Score: 3.3
Sequence: TATGACAAAAGCTTTACAT
Position: -276
Score: 3.3
Sequence: GCTTTACATAATTCTCATT
Position: -166
Score: 3.3
Sequence: ATTTAGAAAAGGTAACAAA
Locus tag: PCC7424_4071
PCC7424_4071 -349 4.4 TTTGACAAAATTTAATATT
-286 3.3 TATGACAAAAGCTTTACAT
-276 3.3 GCTTTACATAATTCTCATT
-166 3.3 ATTTAGAAAAGGTAACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase, subunit II
Cyanothece sp. ATCC 51142 cce_1977 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0567 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22930 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr0950 -134 3.7 TTTACTCAAGATTATTAAT
Position: -13
Score: 3
Sequence: GTTCAGCTAAATTATGACT
Locus tag: PCC7424_4072
PCC7424_4072 -13 3 GTTCAGCTAAATTATGACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxA
Ortholog function: Cytochrome c oxidase, subunit I
Cyanothece sp. ATCC 51142 cce_1976 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0568 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22940 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr0951 -134 3.7 TTTACTCAAGATTATTAAT
Position: -50
Score: 3.3
Sequence: ATGACTAATTATTAAAAAT
Position: -24
Score: 3.3
Sequence: CATAAAACTAACCATCAAT
Locus tag: PCC7424_4073
PCC7424_4073 -50 3.3 ATGACTAATTATTAAAAAT
-24 3.3 CATAAAACTAACCATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase, subunit III
Cyanothece sp. ATCC 51142 cce_1975 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0569 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22950 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr2516 -190 3 AgTTAaAAagtTaaTaAgT
Position: -275
Score: 3.2
Sequence: TCTGTGTGCCATACTCAAT
Position: -271
Score: 3.2
Sequence: TGTGCCATACTCAATCAAT
Position: -158
Score: 3.1
Sequence: ACTTAGAAGTGTTATATTT
Position: -120
Score: 3.3
Sequence: GTAGCTTATTTTACTTATT
Position: -81
Score: 3.5
Sequence: TATTCCTTACTTTATCATT
Position: -6
Score: 3
Sequence: TTGACTATGACTTCTCAAT
Position: 24
Score: 3.3
Sequence: CTTAAAAATCTAGGTCAAT
Locus tag: PCC7424_4322
PCC7424_4322 -275 3.2 TCTGTGTGCCATACTCAAT
-271 3.2 TGTGCCATACTCAATCAAT
-158 3.1 ACTTAGAAGTGTTATATTT
-120 3.3 GTAGCTTATTTTACTTATT
-81 3.5 TATTCCTTACTTTATCATT
-6 3 TTGACTATGACTTCTCAAT
24 3.3 CTTAAAAATCTAGGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2351
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2351 -216 2.9 TTTATTATTGTTTTTTAGT
Cyanothece sp. ATCC 51142 cce_3809 -132 3.2 GTTTTTATTTTCTGTCAAT
Cyanothece sp. PCC 8801 PCC8801_2575 -247 3.1 ATTTCTCCTTATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_2644 -122 4.2 AATTAGATTAATTTTGAAT
Position: -218
Score: 3.4
Sequence: CGTGAGAGTAGTTGGCTTT
Position: -158
Score: 4.8
Sequence: AACGAAAATTATTCTCAAC
Position: -135
Score: 4
Sequence: TTTTAAAATTTGACTCATT
Locus tag: PCC7424_5224
PCC7424_5224 -218 3.4 CGTGAGAGTAGTTGGCTTT
-158 4.8 AACGAAAATTATTCTCAAC
-135 4 TTTTAAAATTTGACTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dpsA
Ortholog function: Nutrient stress-induced DNA-binding protein
Cyanothece sp. ATCC 51142 cce_0479 -144 4.7 GATGCAATATATTCTCAAT
Nostoc sp. PCC 7120 alr3808 -204 3.5 GTTTAGAAATTATTGCAAT
Position: -43
Score: 3.6
Sequence: AAGGATAAAGTAGTTCAAT
Position: 0
Score: 3.8
Sequence: GTGGAAAAATTTAATTATT
Locus tag: PCC7424_5711
PCC7424_5711 -43 3.6 AAGGATAAAGTAGTTCAAT
0 3.8 GTGGAAAAATTTAATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sll1407
Ortholog function: Predicted methyltransferase
Synechocystis sp. PCC 6803 sll1407 -38 3.4 ATTAATAAAACTTTTTAAC
Position: 18
Score: 5.2
Sequence: AATGAGAATAATTCTTTTT
Locus tag: PCC7424_5747
PCC7424_5747 18 5.2 AATGAGAATAATTCTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecD
Ortholog function: Fe(3+) dicitrate ABC transport system, permease protein 2
Synechococcus sp. PCC 7002 SYNPCC7002_G0087 -83 5.2 ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803 slr1317 -78 4.2 ATTGATAATCTTTCCTAGT
Nostoc sp. PCC 7120 all2585 -100 4.6 TCTTATATTAATTCTCAAT
-32 5 AATGACTATATTTTTCAAT
Position: -106
Score: 4.3
Sequence: CTTGACAAAAATTCTAAGT
Position: -64
Score: 5.3
Sequence: TATGAAAAAGTTTCTCAAT
Locus tag: PCC7424_5748
PCC7424_5748 -106 4.3 CTTGACAAAAATTCTAAGT
-64 5.3 TATGAAAAAGTTTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecC
Ortholog function: Fe(3+) dicitrate ABC transport system, permease protein 1
Synechococcus sp. PCC 7002 SYNPCC7002_G0088 -83 5.2 ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803 slr1316 -78 4.2 ATTGATAATCTTTCCTAGT
Nostoc sp. PCC 7120 all2586 -100 4.6 TCTTATATTAATTCTCAAT
-32 5 AATGACTATATTTTTCAAT
Position: 25
Score: 3.5
Sequence: ATTGCCGTTTTTGTTCAAT
Locus tag: PCC7424_5760
PCC7424_5760 25 3.5 ATTGCCGTTTTTGTTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sll1203
Ortholog function: Conserved unknown protein
Synechocystis sp. PCC 6803 sll1203 -38 3.4 ATTAATAAAACTTTTTAAC
Nostoc sp. PCC 7120 alr2187 -69 4.3 TTTGCAAAAAATTATTAAC