Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PedR regulog to Prochlorococcus marinus str. MIT 9515

Reference regulog properties
Source regulog: PedR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: repressor (activator)
Biological process: Photosynthesis; Carbon fixation
Effector: Trx, thioredoxin protein
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9515
Orthologous TF(s) null
Regulated genes 2
Built upon 56 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9515
Locus tag Position Score Sequence
Position: -168
Score: 3.7
Sequence: AAGCATGAGTATTT
Position: -162
Score: 3.7
Sequence: GAGTATTTAGACTC
Locus tag: null
null -168 3.7 AAGCATGAGTATTT
-162 3.7 GAGTATTTAGACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
Cyanothece sp. ATCC 51142 cce_4532 -155 4.3 AAGCAATTTTTCTC
Cyanothece sp. PCC 8801 PCC8801_0791 -42 4.2 AGGCAAATACACTT
Microcystis aeruginosa NIES-843 MAE_16230 -223 3.6 AAGTAAATGTATAA
Synechocystis sp. PCC 6803 slr0749 -196 4.8 AAGTAACTATACCC
-178 4 AAGTTATTTTATTT