Propagation of Fur regulog to Cyanothece sp. CCY 0110

Reference regulog properties
Source regulog:	Fur - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Cyanothece sp. CCY 0110
Orthologous TF(s)	CY0110_20615
Regulated genes	37

Built upon 167 sites [see more]

Predicted regulatory interactions in *Cyanothece sp. CCY 0110*
	Locus tag	Position	Score	Sequence
Position: -136 Score: 3.7 Sequence: TCTCAGAATAATTCTTATC Position: -111 Score: 3.3 Sequence: AAAGTCAACAGTAATAATT Position: -86 Score: 3 Sequence: TTTCTTGAATAATCTTAAT Position: -68 Score: 3.1 Sequence: TATAATATCTAATCTTAAA Position: -58 Score: 3.5 Sequence: AATCTTAAAAACATTCAAT Locus tag: CY0110_10037
	CY0110_10037	-136	3.7	TCTCAGAATAATTCTTATC
		-111	3.3	AAAGTCAACAGTAATAATT
		-86	3	TTTCTTGAATAATCTTAAT
		-68	3.1	TATAATATCTAATCTTAAA
		-58	3.5	AATCTTAAAAACATTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: Predicted peroxide stress response regulator, Fur family
Synechocystis sp. PCC 6803	slr1738	-194	3	ATTAATATTTTTTTTATAA
Cyanothece sp. PCC 7425	Cyan7425_1597	-88	4.9	TTTGAGAATTATACTAAAT

Position: -180 Score: 3 Sequence: CATAAGTAACGTCATTATT Position: -146 Score: 2.9 Sequence: TTAGAAAAAGTTCCTAAAA Position: -1 Score: 3 Sequence: TATGACAGAATCTGTTCTT Locus tag: CY0110_10642
	CY0110_10642	-180	3	CATAAGTAACGTCATTATT
		-146	2.9	TTAGAAAAAGTTCCTAAAA
		-1	3	TATGACAGAATCTGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801	PCC8801_0256	-185	2.2	TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843	MAE_22920	-282	2.5	TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_1780	-278	3.5	ATTGTTAAAATTATGAAAT
		-167	3.3	ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942	Synpcc7942_2601	-158	4.3	GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313	PMT1340	-30	2.6	ATTTAAATTATTTTATTGT

Position: -41 Score: 3.1 Sequence: AGCACAATAACTTATCAAT Position: 27 Score: 3.5 Sequence: AACGAGAACGTTTTACAAG Locus tag: CY0110_10647
	CY0110_10647	-41	3.1	AGCACAATAACTTATCAAT
		27	3.5	AACGAGAACGTTTTACAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaB
Ortholog function: Protoheme IX farnesyltransferase
Cyanothece sp. PCC 8801	PCC8801_0255	-185	2.2	TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843	MAE_22910	-282	2.5	TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_1781	-41	4.1	AATTATAACCAGTTTCAAT
Synechococcus elongatus PCC 7942	Synpcc7942_2600	-158	4.3	GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313	PMT1339	-30	2.6	ATTTAAATTATTTTATTGT

Position: -126 Score: 3.3 Sequence: AATAAAAGGCACTATCTAT Position: -45 Score: 2.9 Sequence: CTTTTTTTCAACTGTCATT Locus tag: CY0110_03374
	CY0110_03374	-126	3.3	AATAAAAGGCACTATCTAT
		-45	2.9	CTTTTTTTCAACTGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxC
Ortholog function: Cytochrome c oxidase, subunit III
Cyanothece sp. ATCC 51142	cce_1975	-136	3.7	AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0569	-152	2.7	TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843	MAE_22950	-216	2.5	TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120	alr2516	-190	3	AgTTAaAAagtTaaTaAgT

Position: -195 Score: 3.4 Sequence: ATAGAGAAAGAGTTTTACT Position: -100 Score: 3.3 Sequence: ATTGATAAACCTTTCTATG Position: -3 Score: 3.5 Sequence: AAGGTGATTGGTATTCAAT Locus tag: CY0110_03379
	CY0110_03379	-195	3.4	ATAGAGAAAGAGTTTTACT
		-100	3.3	ATTGATAAACCTTTCTATG
		-3	3.5	AAGGTGATTGGTATTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxA
Ortholog function: Cytochrome c oxidase, subunit I
Cyanothece sp. ATCC 51142	cce_1976	-136	3.7	AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0568	-152	2.7	TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843	MAE_22940	-216	2.5	TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120	alr0951	-134	3.7	TTTACTCAAGATTATTAAT

Position: -216 Score: 3 Sequence: AATTAGATTTAAACCGATT Position: -210 Score: 3.2 Sequence: ATTTAAACCGATTATTTCT Position: -142 Score: 3.9 Sequence: ATTTCTTAAGGTTATCTTT Position: -136 Score: 3.1 Sequence: TAAGGTTATCTTTGTTAAT Position: -119 Score: 3.1 Sequence: ATCAAGTTTGATTCTAAAG Position: -75 Score: 3.6 Sequence: TATAAAAAAACCAATCATT Position: -69 Score: 3.2 Sequence: AAAACCAATCATTTTCAAA Position: -59 Score: 3.1 Sequence: ATTTTCAAAAGTTGGCCTT Position: -35 Score: 3.1 Sequence: AATTAGATAGGTAATCGTC Locus tag: CY0110_03384
	CY0110_03384	-216	3	AATTAGATTTAAACCGATT
		-210	3.2	ATTTAAACCGATTATTTCT
		-142	3.9	ATTTCTTAAGGTTATCTTT
		-136	3.1	TAAGGTTATCTTTGTTAAT
		-119	3.1	ATCAAGTTTGATTCTAAAG
		-75	3.6	TATAAAAAAACCAATCATT
		-69	3.2	AAAACCAATCATTTTCAAA
		-59	3.1	ATTTTCAAAAGTTGGCCTT
		-35	3.1	AATTAGATAGGTAATCGTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase, subunit II
Cyanothece sp. ATCC 51142	cce_1977	-136	3.7	AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0567	-152	2.7	TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843	MAE_22930	-216	2.5	TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120	alr0950	-134	3.7	TTTACTCAAGATTATTAAT

Position: -150 Score: 3.7 Sequence: ATCGGTAAAATCTATAATT Position: -141 Score: 3.2 Sequence: ATCTATAATTTTGATTAAG Position: -78 Score: 3.1 Sequence: GATGAGATAAATTCCTTCT Position: -74 Score: 3.3 Sequence: AGATAAATTCCTTCTCATT Position: -33 Score: 3 Sequence: AGCCATAAAAATTGTTGTT Position: 24 Score: 3.5 Sequence: ATTAAAAACTATGATCTAA Locus tag: CY0110_24111
	CY0110_24111	-150	3.7	ATCGGTAAAATCTATAATT
		-141	3.2	ATCTATAATTTTGATTAAG
		-78	3.1	GATGAGATAAATTCCTTCT
		-74	3.3	AGATAAATTCCTTCTCATT
		-33	3	AGCCATAAAAATTGTTGTT
		24	3.5	ATTAAAAACTATGATCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: apcF
Ortholog function: Allophycocyanin, beta subunit
Synechococcus sp. PCC 7002	SYNPCC7002_A1631	-257	3.3	TTTTATTATTTTTTTTAAA
Cyanothece sp. ATCC 51142	cce_1944	-151	4.4	ATTGCTAAAATCTATAATT
Cyanothece sp. PCC 7425	Cyan7425_1838	-245	3	TTTTATATTATCTTTTAAC
Thermosynechococcus elongatus BP-1	null	-157	3.1	AATTATGAACTTTTGTAAT

Position: -109 Score: 3.2 Sequence: GTTTAGGATTTTTCTCTCT Position: -73 Score: 3.2 Sequence: ATTGAATACGTTGGTTAAA Position: -64 Score: 2.9 Sequence: GTTGGTTAAATTACTTATA Position: -61 Score: 3.1 Sequence: GGTTAAATTACTTATAATT Position: -51 Score: 3 Sequence: CTTATAATTTCTTAACATT Position: -45 Score: 3.4 Sequence: ATTTCTTAACATTATAAGT Position: 8 Score: 3.4 Sequence: AGGGCAGATGACTATCAAT Position: 14 Score: 3.1 Sequence: GATGACTATCAATTTTGTT Position: 27 Score: 3.1 Sequence: TTTGTTAAAGAAAATAAAG Locus tag: CY0110_24201
	CY0110_24201	-109	3.2	GTTTAGGATTTTTCTCTCT
		-73	3.2	ATTGAATACGTTGGTTAAA
		-64	2.9	GTTGGTTAAATTACTTATA
		-61	3.1	GGTTAAATTACTTATAATT
		-51	3	CTTATAATTTCTTAACATT
		-45	3.4	ATTTCTTAACATTATAAGT
		8	3.4	AGGGCAGATGACTATCAAT
		14	3.1	GATGACTATCAATTTTGTT
		27	3.1	TTTGTTAAAGAAAATAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdx
Ortholog function: Predicted ferredoxin
Cyanothece sp. ATCC 51142	cce_0892	-29	3	TTTCTTATAATTTCTTAAC
Cyanothece sp. PCC 8801	PCC8801_2860	-49	3.8	ATTGTAAAAAAATATTAAC
Trichodesmium erythraeum IMS101	Tery_4504	-35	2.6	GTTAATATTTTTTTATAAC

Position: -184 Score: 3 Sequence: GAAGAAATTTGTTGTCTAG Position: -147 Score: 2.9 Sequence: TTTTATTAACATAGGAATT Position: -21 Score: 3.1 Sequence: ATTGATTTTGGAGATAAGT Locus tag: CY0110_02239
	CY0110_02239	-184	3	GAAGAAATTTGTTGTCTAG
		-147	2.9	TTTTATTAACATAGGAATT
		-21	3.1	ATTGATTTTGGAGATAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803	sll0849	-298	3.3	AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142	cce_0660	-298	3.4	ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425	Cyan7425_5031	-91	3.1	GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843	MAE_41160	-274	2.9	ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab	CYA_2647	-106	3	TTTATTAATTTTTCGTAAG

Position: -307 Score: 3.4 Sequence: ATTGTAAATTTTTTGCTAA Position: -296 Score: 3.8 Sequence: TTTGCTAATAATAGTCTAA Position: -209 Score: 3.2 Sequence: TTTAAGAAATGTTAATGAT Position: -202 Score: 3.1 Sequence: AATGTTAATGATCCCCTAA Position: -121 Score: 3.2 Sequence: ACTGATAGGCGTTCTCTAG Position: -49 Score: 3.4 Sequence: GTTAAGAAATCTTGCCATT Locus tag: CY0110_00395
	CY0110_00395	-307	3.4	ATTGTAAATTTTTTGCTAA
		-296	3.8	TTTGCTAATAATAGTCTAA
		-209	3.2	TTTAAGAAATGTTAATGAT
		-202	3.1	AATGTTAATGATCCCCTAA
		-121	3.2	ACTGATAGGCGTTCTCTAG
		-49	3.4	GTTAAGAAATCTTGCCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803	sll0849	-298	3.3	AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142	cce_0660	-298	3.4	ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425	Cyan7425_5031	-91	3.1	GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843	MAE_41160	-274	2.9	ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab	CYA_2647	-106	3	TTTATTAATTTTTCGTAAG

Position: -349 Score: 3.2 Sequence: TCTGATATAGGTTTTCAGC Position: -293 Score: 3.3 Sequence: AATGATGTTTTTTATGTTA Position: -276 Score: 3.1 Sequence: TATGAATACATAACTTAGT Position: -259 Score: 3 Sequence: GTTGATAGTTTAAATAATA Position: -230 Score: 3.1 Sequence: AATAAGAATTTTAACGTTT Position: -214 Score: 2.9 Sequence: TTTTCAATATATTTTAACT Position: -212 Score: 3.1 Sequence: TTCAATATATTTTAACTTT Position: -175 Score: 3.1 Sequence: TTTAATAAAACTAATAAAG Position: -133 Score: 4.5 Sequence: GATGACAACTGCTCTCAAT Position: -111 Score: 3 Sequence: GAATTAAACAATTCTTAAT Position: -90 Score: 3.1 Sequence: TTTTATCTTGCTAATCTTT Position: -84 Score: 3.6 Sequence: CTTGCTAATCTTTTTAAGT Position: -59 Score: 2.9 Sequence: TAAGCTTATTGATAGTATT Position: -52 Score: 5.3 Sequence: ATTGATAGTATTTTTCAAT Position: -41 Score: 3.3 Sequence: TTTTCAATAAGTGTTCATT Position: -29 Score: 3.4 Sequence: GTTCATTAAGTTGTTCAAT Position: -13 Score: 3.4 Sequence: AATGAGAATCATCATGCAA Locus tag: CY0110_07629
	CY0110_07629	-349	3.2	TCTGATATAGGTTTTCAGC
		-293	3.3	AATGATGTTTTTTATGTTA
		-276	3.1	TATGAATACATAACTTAGT
		-259	3	GTTGATAGTTTAAATAATA
		-230	3.1	AATAAGAATTTTAACGTTT
		-214	2.9	TTTTCAATATATTTTAACT
		-212	3.1	TTCAATATATTTTAACTTT
		-175	3.1	TTTAATAAAACTAATAAAG
		-133	4.5	GATGACAACTGCTCTCAAT
		-111	3	GAATTAAACAATTCTTAAT
		-90	3.1	TTTTATCTTGCTAATCTTT
		-84	3.6	CTTGCTAATCTTTTTAAGT
		-59	2.9	TAAGCTTATTGATAGTATT
		-52	5.3	ATTGATAGTATTTTTCAAT
		-41	3.3	TTTTCAATAAGTGTTCATT
		-29	3.4	GTTCATTAAGTTGTTCAAT
		-13	3.4	AATGAGAATCATCATGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Photosystem II chlorophyll-binding protein
Synechocystis sp. PCC 6803	sll0247	-269	2.8	ATTTCTTAATAATTTTAGT
Cyanothece sp. ATCC 51142	cce_1785	-18	4.4	ATTGCAAATCTTTTTAAAT
Cyanothece sp. PCC 7425	Cyan7425_2434	-61	4.7	ATTGAGTTTATTTCTCAAC
Nostoc sp. PCC 7120	all4001	-161	4.8	ATTAAGAATCTTTTTCAAT
Trichodesmium erythraeum IMS101	Tery_1667	-156	3.2	TTTTATAATTTCTTTTAAA
Synechococcus elongatus PCC 7942	Synpcc7942_1542	-45	5.2	ATTGAGAATTATTGTAAAT
Thermosynechococcus elongatus BP-1	null	-121	5.5	AATGCTATTAATTCTCAAT

Position: -305 Score: 4.9 Sequence: ACTGATAATCATCATCAAT Position: -155 Score: 4 Sequence: TTTTTCTTTAATTATCAAT Position: -142 Score: 5.2 Sequence: ATCAATAATAATTATCAAT Locus tag: CY0110_13696
	CY0110_13696	-305	4.9	ACTGATAATCATCATCAAT
		-155	4	TTTTTCTTTAATTATCAAT
		-142	5.2	ATCAATAATAATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Fe ABC transport system, substrate-binding protein
Synechocystis sp. PCC 6803	slr1295	-44	4.9	ATTGAGAATTACTTTTATT
Cyanothece sp. ATCC 51142	cce_2632	-20	4.8	ATCAATAATAATTTTCAAT
Cyanothece sp. PCC 8801	PCC8801_1443	-90	4	ATTAGGAATAATTAGCAAC

Position: -236 Score: 5.1 Sequence: AATGAAGATAATTGTCATT Position: -192 Score: 5.1 Sequence: AATGCAATATATTCTCAAT Locus tag: CY0110_05412
	CY0110_05412	-236	5.1	AATGAAGATAATTGTCATT
		-192	5.1	AATGCAATATATTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dpsA
Ortholog function: Nutrient stress-induced DNA-binding protein
Cyanothece sp. ATCC 51142	cce_0479	-144	4.7	GATGCAATATATTCTCAAT
Nostoc sp. PCC 7120	alr3808	-204	3.5	GTTTAGAAATTATTGCAAT

Position: -85 Score: 3.2 Sequence: ATTTTTGAAATTTTTTAAT Position: -82 Score: 4.3 Sequence: TTTGAAATTTTTTAATATT Position: -75 Score: 3.1 Sequence: TTTTTTAATATTTTTTGAT Position: -62 Score: 3.6 Sequence: TTTGATAAACTGTAACATA Position: -43 Score: 3.2 Sequence: TAGAAATATTTTTCTCATA Position: -17 Score: 3.2 Sequence: TAGGAGAGCAAATTCCAAT Locus tag: CY0110_11617
	CY0110_11617	-85	3.2	ATTTTTGAAATTTTTTAAT
		-82	4.3	TTTGAAATTTTTTAATATT
		-75	3.1	TTTTTTAATATTTTTTGAT
		-62	3.6	TTTGATAAACTGTAACATA
		-43	3.2	TAGAAATATTTTTCTCATA
		-17	3.2	TAGGAGAGCAAATTCCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0913
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_A0913	-146	2.2	TTTTTACAACATTTTTAAA
		-68	3.8	AATGAGAAAATTTTGATAT
Synechocystis sp. PCC 6803	sll1911	-59	4.2	GTTGTTAAAATTTAACAAT
Cyanothece sp. ATCC 51142	cce_0019	-75	3.1	TTTTTTAATATTTTTTGAT
Cyanothece sp. PCC 8801	PCC8801_2812	-67	4.4	TATGATAAAATTTATTAAA
Trichodesmium erythraeum IMS101	Tery_4773	-64	2.4	TTTATGAAATATTTATGAT

Position: -242 Score: 4.3 Sequence: GTTGAAAAATCTTCTAAAT Position: -44 Score: 5.7 Sequence: ATTGAAATCAATTCTCAAT Locus tag: CY0110_08161
	CY0110_08161	-242	4.3	GTTGAAAAATCTTCTAAAT
		-44	5.7	ATTGAAATCAATTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: Iron-siderophore complex transporter
Synechococcus sp. PCC 7002	SYNPCC7002_G0137	-279	4.2	ATTAAGAGATTATCTCAAT
Synechocystis sp. PCC 6803	sll1404	-286	4.6	TATGTGAAATATTATTATT
		-110	6	ATTGAAAATAGTTATCAAT
		-64	4.6	ATTGAGAATTACTCTTAAC
Cyanothece sp. PCC 8801	PCC8801_3017	-38	5.7	ATTGATAACTTTTCTCAAT
Cyanothece sp. PCC 7425	Cyan7425_2418	-264	4.6	ATTGATGATTATTTTCAAC

Position: -94 Score: 5.7 Sequence: TTTGACAAAAATTATCATT Locus tag: CY0110_08171
	CY0110_08171	-94	5.7	TTTGACAAAAATTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0098
Ortholog function: Predicted TonB-dependent siderophore receptor
Cyanothece sp. PCC 8801	PCC8801_3039	-89	5.5	GTTGACAAAAATTCTCATT

Position: 17 Score: 3.7 Sequence: AATCATCAAATTAATCTTT Locus tag: CY0110_08176
	CY0110_08176	17	3.7	AATCATCAAATTAATCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecB
Ortholog function: Fe(3+) dicitrate ABC transport system, substrate-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_G0097	-94	3.7	ATTTCTTATTAATATAAAT
Cyanothece sp. PCC 8801	PCC8801_3038	-89	5.5	GTTGACAAAAATTCTCATT

Position: -286 Score: 4.9 Sequence: ATTAAGAATATTTCTTAAT Position: -144 Score: 4.8 Sequence: AATTAGAAAGATAATCAAT Position: -138 Score: 3.7 Sequence: AAAGATAATCAATAAAAAT Position: -132 Score: 3.5 Sequence: AATCAATAAAAATATTTTT Position: -113 Score: 3.9 Sequence: ATTGATAAGACTTATCCAA Position: -85 Score: 3.5 Sequence: TTTAAGAATAAATAGTATA Position: -67 Score: 5 Sequence: ATTAATAGTATTTCTCAAT Locus tag: CY0110_08191
	CY0110_08191	-286	4.9	ATTAAGAATATTTCTTAAT
		-144	4.8	AATTAGAAAGATAATCAAT
		-138	3.7	AAAGATAATCAATAAAAAT
		-132	3.5	AATCAATAAAAATATTTTT
		-113	3.9	ATTGATAAGACTTATCCAA
		-85	3.5	TTTAAGAATAAATAGTATA
		-67	5	ATTAATAGTATTTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sll1203
Ortholog function: Conserved unknown protein
Synechocystis sp. PCC 6803	sll1203	-38	3.4	ATTAATAAAACTTTTTAAC
Nostoc sp. PCC 7120	alr2187	-69	4.3	TTTGCAAAAAATTATTAAC

Position: -7 Score: 3.1 Sequence: TTTCATCATGAATAAAATT Position: -1 Score: 3.4 Sequence: CATGAATAAAATTACATTT Locus tag: CY0110_08201
	CY0110_08201	-7	3.1	TTTCATCATGAATAAAATT
		-1	3.4	CATGAATAAAATTACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0089
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_G0089	-83	5.2	ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803	slr1485	-42	2.7	ACTGTGAAATTTATTTAAC
		-9	2.2	GTTTTAATAATGTTTAAAT

Position: -295 Score: 3 Sequence: TTTGACATCTTCAAAAATT Position: -287 Score: 3.1 Sequence: CTTCAAAAATTTAAACTAT Position: -228 Score: 2.9 Sequence: ATTAAAAAAAGATAATAAA Position: -227 Score: 3.4 Sequence: TTAAAAAAAGATAATAAAT Position: -221 Score: 3.2 Sequence: AAAGATAATAAATCGTTCT Position: -179 Score: 3.1 Sequence: TAAAAGTAGAAGTCTCATT Position: -85 Score: 3.1 Sequence: TTTGATATTTTTCCCTAAA Position: -53 Score: 3.4 Sequence: TGCAACAAAAATTACCATT Position: -13 Score: 2.9 Sequence: AGAGAAAACACTTATGAAC Locus tag: CY0110_04748
	CY0110_04748	-295	3	TTTGACATCTTCAAAAATT
		-287	3.1	CTTCAAAAATTTAAACTAT
		-228	2.9	ATTAAAAAAAGATAATAAA
		-227	3.4	TTAAAAAAAGATAATAAAT
		-221	3.2	AAAGATAATAAATCGTTCT
		-179	3.1	TAAAAGTAGAAGTCTCATT
		-85	3.1	TTTGATATTTTTCCCTAAA
		-53	3.4	TGCAACAAAAATTACCATT
		-13	2.9	AGAGAAAACACTTATGAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate-flavodoxin oxidoreductase
Synechococcus sp. PCC 7002	SYNPCC7002_A1443	-165	2.2	TTTTCTTATAACTTTTAGC
Cyanothece sp. PCC 8801	PCC8801_3918	-67	3.4	TTTGTCAATAATTTGTAAC
Microcystis aeruginosa NIES-843	MAE_38140	-292	3.9	ATTCTGAATATTAATTAAT
Nostoc sp. PCC 7120	alr2803	-92	3.8	ATTTTTAATCAGTATTAAT

Position: -222 Score: 3.8 Sequence: CTTGCAAATCTTTCCTATT Position: -163 Score: 4.2 Sequence: ATTGAAAATTAATGCTAAT Position: -60 Score: 4.1 Sequence: AATGAAATCACTTATTTTT Position: -1 Score: 4.2 Sequence: TATGGAAAACTCTATCATT Locus tag: CY0110_30728
	CY0110_30728	-222	3.8	CTTGCAAATCTTTCCTATT
		-163	4.2	ATTGAAAATTAATGCTAAT
		-60	4.1	AATGAAATCACTTATTTTT
		-1	4.2	TATGGAAAACTCTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_A0871	-83	5.1	GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142	cce_3801	-163	4.2	ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425	Cyan7425_3510	-105	5.3	ATTGAGAATAATTTTCAAA
		-60	4	GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843	MAE_12460	-117	4.4	TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101	Tery_3222	-94	5.1	AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942	Synpcc7942_1406	-81	4.2	ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab	CYA_2794	-26	3.8	AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421	gll1012	-64	3.7	ATTGACAATTAATTGCAGC

Position: -31 Score: 3.2 Sequence: AATGGAGATAATAATAAAA Position: -25 Score: 3 Sequence: GATAATAATAAAACACCTT Position: 3 Score: 2.9 Sequence: TCTGAAAATAACTGGGAAA Position: 13 Score: 3.2 Sequence: ACTGGGAAAACTTCTTAAA Locus tag: CY0110_30743
	CY0110_30743	-31	3.2	AATGGAGATAATAATAAAA
		-25	3	GATAATAATAAAACACCTT
		3	2.9	TCTGAAAATAACTGGGAAA
		13	3.2	ACTGGGAAAACTTCTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2351
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_A2351	-216	2.9	TTTATTATTGTTTTTTAGT
Cyanothece sp. ATCC 51142	cce_3809	-132	3.2	GTTTTTATTTTCTGTCAAT
Cyanothece sp. PCC 8801	PCC8801_2575	-247	3.1	ATTTCTCCTTATTTTTAAT
Trichodesmium erythraeum IMS101	Tery_2644	-122	4.2	AATTAGATTAATTTTGAAT

Position: -96 Score: 5.1 Sequence: GTTGCTAATTATTGTCAAT Position: -66 Score: 3.5 Sequence: GTTGCAAATAGCTCTTAAG Position: -53 Score: 3.8 Sequence: CTTAAGAAAGACTATCATA Position: -47 Score: 3.6 Sequence: AAAGACTATCATATTTAAT Locus tag: CY0110_20615
	CY0110_20615	-96	5.1	GTTGCTAATTATTGTCAAT
		-66	3.5	GTTGCAAATAGCTCTTAAG
		-53	3.8	CTTAAGAAAGACTATCATA
		-47	3.6	AAAGACTATCATATTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Ferric uptake regulator, Fur family
Synechococcus sp. PCC 7002	SYNPCC7002_A1649	-88	3.5	GTTAGTATTTATTTGCAAT
Cyanothece sp. ATCC 51142	cce_2330	-96	5.1	GTTGCTAATTATTTTCAAT
Cyanothece sp. PCC 8801	PCC8801_0870	-97	4.6	GTTGCAAATTATTTGCAAT
Trichodesmium erythraeum IMS101	Tery_1958	-44	4.7	ATTGTGTATCATTGTCAAT
Thermosynechococcus elongatus BP-1	null	-59	4.4	CATTGTAATTATTCTCAAT

Position: -321 Score: 3.5 Sequence: CTGAGCAACAATTCTCAAT Position: -280 Score: 5.6 Sequence: ATTGAGAATAGTTATTATT Position: -259 Score: 3.5 Sequence: CTTCAGGACAATAATTAAT Position: -116 Score: 3.8 Sequence: ATTACTAAACATTACCTTT Position: -110 Score: 3.8 Sequence: AAACATTACCTTTCTCAAT Position: -49 Score: 4.3 Sequence: AATGAAAGAAATTATTGAT Locus tag: CY0110_06334
	CY0110_06334	-321	3.5	CTGAGCAACAATTCTCAAT
		-280	5.6	ATTGAGAATAGTTATTATT
		-259	3.5	CTTCAGGACAATAATTAAT
		-116	3.8	ATTACTAAACATTACCTTT
		-110	3.8	AAACATTACCTTTCTCAAT
		-49	4.3	AATGAAAGAAATTATTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: Ferrous iron transport protein A
Synechocystis sp. PCC 6803	ssr2333	-69	4.4	TTTGATATTTATTCTGAAC
		-31	4.5	GTTGAGAATTATTTGCAGT
Cyanothece sp. ATCC 51142	cce_0033	-298	3.3	ATTAAAAAATACTGTTAAC
		-47	4.5	GATAAGAATTATTCTTAAT
Trichodesmium erythraeum IMS101	Tery_2879	-270	3.5	TTTTCCAAATTTTTTCAGT

Position: -268 Score: 3.6 Sequence: TTTTATATTGTTCCTAATT Position: -253 Score: 3.4 Sequence: AATTATATAAATGCGCAAC Position: -228 Score: 3.8 Sequence: AATAATAAAATTACTTTTT Position: -225 Score: 3.1 Sequence: AATAAAATTACTTTTTAAA Position: -205 Score: 3.4 Sequence: CTTAAAAATTGTTTTTATC Position: -184 Score: 3.2 Sequence: TTTTATAGTATTTTTACTT Position: -161 Score: 3.2 Sequence: ATTTAAAATTTTACTTTAA Position: -41 Score: 3.3 Sequence: AATAACAAGCTTTATATTT Locus tag: CY0110_24376
	CY0110_24376	-268	3.6	TTTTATATTGTTCCTAATT
		-253	3.4	AATTATATAAATGCGCAAC
		-228	3.8	AATAATAAAATTACTTTTT
		-225	3.1	AATAAAATTACTTTTTAAA
		-205	3.4	CTTAAAAATTGTTTTTATC
		-184	3.2	TTTTATAGTATTTTTACTT
		-161	3.2	ATTTAAAATTTTACTTTAA
		-41	3.3	AATAACAAGCTTTATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002	SYNPCC7002_A2347	-126	3.6	TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803	slr0749	-173	3.3	ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801	PCC8801_0791	-242	2.7	ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843	MAE_16230	-150	2.8	ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1	null	-211	2.8	TTTTGTATTTTTGTTTAAT

Position: -31 Score: 3.2 Sequence: TATAGTAACTTTTGTGATT Position: -13 Score: 3 Sequence: TAGGATAAAATTCATGATG Locus tag: CY0110_24381
	CY0110_24381	-31	3.2	TATAGTAACTTTTGTGATT
		-13	3	TAGGATAAAATTCATGATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cce_4533
Ortholog function: Conserved hypothetical protein
Cyanothece sp. ATCC 51142	cce_4533	-118	3.7	TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801	PCC8801_0790	-242	2.7	ATTTAGTAAATTTTAAAGT

Position: -205 Score: 3.2 Sequence: CGTGATAGTTTTTAGTTTT Position: -186 Score: 3.1 Sequence: AGTTAATAAATTGATTATT Position: -177 Score: 4 Sequence: ATTGATTATTTTCTTGAAT Position: -161 Score: 3.1 Sequence: AATATCAAGCTTTCCCAAT Position: -151 Score: 3.1 Sequence: TTTCCCAATGAAATTCAGT Position: -145 Score: 3.8 Sequence: AATGAAATTCAGTCTTAAA Position: -96 Score: 3.8 Sequence: ATTAAAAAATGTGATAAAT Position: -89 Score: 3.4 Sequence: AATGTGATAAATTTTCCTA Position: -65 Score: 3.2 Sequence: AACGAAAAAAATTAATTAA Position: -51 Score: 3.6 Sequence: ATTAAGCTTAATTCTCTTA Position: -49 Score: 3.1 Sequence: TAAGCTTAATTCTCTTAAT Position: -13 Score: 3.4 Sequence: AAGGAGATTTATTATGACA Position: -1 Score: 3.1 Sequence: TATGACAACAGCTACATTT Position: 14 Score: 3.7 Sequence: ATTTATAGAAGATAACAAT Position: 21 Score: 3.3 Sequence: GAAGATAACAATTTTGAAC Position: 24 Score: 3.4 Sequence: GATAACAATTTTGAACAAT Locus tag: CY0110_09221
	CY0110_09221	-205	3.2	CGTGATAGTTTTTAGTTTT
		-186	3.1	AGTTAATAAATTGATTATT
		-177	4	ATTGATTATTTTCTTGAAT
		-161	3.1	AATATCAAGCTTTCCCAAT
		-151	3.1	TTTCCCAATGAAATTCAGT
		-145	3.8	AATGAAATTCAGTCTTAAA
		-96	3.8	ATTAAAAAATGTGATAAAT
		-89	3.4	AATGTGATAAATTTTCCTA
		-65	3.2	AACGAAAAAAATTAATTAA
		-51	3.6	ATTAAGCTTAATTCTCTTA
		-49	3.1	TAAGCTTAATTCTCTTAAT
		-13	3.4	AAGGAGATTTATTATGACA
		-1	3.1	TATGACAACAGCTACATTT
		14	3.7	ATTTATAGAAGATAACAAT
		21	3.3	GAAGATAACAATTTTGAAC
		24	3.4	GATAACAATTTTGAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: all2367
Ortholog function: Predicted thioredoxin
Nostoc sp. PCC 7120	all2367	-181	3.2	TATTGTAATATCTTTTAAT

Position: -167 Score: 3.7 Sequence: AAAAATTAAAATTATCGAT Position: -115 Score: 3.4 Sequence: ATTTTGAATAAATATTAAG Position: -102 Score: 3.7 Sequence: ATTAAGATTATATATTTTT Position: 27 Score: 4.1 Sequence: ATTGATAACAATAATTTTC Locus tag: CY0110_27134
	CY0110_27134	-167	3.7	AAAAATTAAAATTATCGAT
		-115	3.4	ATTTTGAATAAATATTAAG
		-102	3.7	ATTAAGATTATATATTTTT
		27	4.1	ATTGATAACAATAATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigC
Ortholog function: RNA polymerase sigma-subunit
Nostoc sp. PCC 7120	all1692	-320	3.5	AATAAACATAATTTTTACT

Position: -97 Score: 4.5 Sequence: ATTGATAATATATAACTAT Locus tag: CY0110_12097
	CY0110_12097	-97	4.5	ATTGATAATATATAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbA
Ortholog function: photosystem II, reaction center protein
Synechocystis sp. PCC 6803	slr1181	-242	2.8	ATTAAAATCTTTTTTTTAC
		-182	4	TTAAAGAAATATTATTAAT

Position: -342 Score: 3.2 Sequence: ATTAAAATAGAATTTTTAT Position: -341 Score: 2.9 Sequence: TTAAAATAGAATTTTTATT Position: -316 Score: 3.3 Sequence: TATATTATCTATTGTCTTT Position: -297 Score: 3.3 Sequence: AATCAATAAATAAATTATT Position: -291 Score: 2.9 Sequence: TAAATAAATTATTTACATT Position: -246 Score: 3 Sequence: ACAAATAAATTTTGTAAAT Position: -211 Score: 3.8 Sequence: ACTCAGTTTATTTGTCAAT Locus tag: CY0110_26919
	CY0110_26919	-342	3.2	ATTAAAATAGAATTTTTAT
		-341	2.9	TTAAAATAGAATTTTTATT
		-316	3.3	TATATTATCTATTGTCTTT
		-297	3.3	AATCAATAAATAAATTATT
		-291	2.9	TAAATAAATTATTTACATT
		-246	3	ACAAATAAATTTTGTAAAT
		-211	3.8	ACTCAGTTTATTTGTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002	SYNPCC7002_A1018	-57	3.8	ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142	cce_4358	-183	2.7	AATAAATAATTTTTGTAAA
		-138	2.3	ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801	PCC8801_4320	-186	2.3	ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843	MAE_12190	-247	2.8	ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120	all4365	-272	2.9	GTTTTTTATTTTTTTCATC
		-232	3	AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101	Tery_3224	-65	3	GTTTAAAATTTTTTGATAT

Position: -49 Score: 4 Sequence: AATGAGCATCAGCCTCATT Position: 11 Score: 3 Sequence: ATTTCCAAAATTTAGCCAG Locus tag: CY0110_22956
	CY0110_22956	-49	4	AATGAGCATCAGCCTCATT
		11	3	ATTTCCAAAATTTAGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaB
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A2
Synechococcus sp. PCC 7002	SYNPCC7002_A1962	-206	3.4	AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142	cce_0990	-205	3.4	AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843	MAE_47570	-297	3.2	ATTAATAAACTTTTGTAAA
Gloeobacter violaceus PCC 7421	gvip471	-195	2.2	TTTTTAAAAATTGTTAAGT

Position: -336 Score: 3.4 Sequence: TAAGACAAATGTCAACATT Position: -315 Score: 2.9 Sequence: GTTAAAAAAATATTTTTAT Position: -314 Score: 3 Sequence: TTAAAAAAATATTTTTATA Position: -311 Score: 3 Sequence: AAAAAATATTTTTATATAT Position: -304 Score: 3 Sequence: ATTTTTATATATTACTTTT Position: -287 Score: 3.3 Sequence: TTTGTGAATAAAGAGCAAA Position: -220 Score: 3.2 Sequence: ATCAAGAATGAGCCTAATT Position: -214 Score: 3.9 Sequence: AATGAGCCTAATTTTAATT Position: -211 Score: 2.9 Sequence: GAGCCTAATTTTAATTATT Position: -208 Score: 2.9 Sequence: CCTAATTTTAATTATTGTT Position: -205 Score: 3.4 Sequence: AATTTTAATTATTGTTAAG Position: -166 Score: 3.1 Sequence: TCTAAGACTTATCATCTAT Locus tag: CY0110_22961
	CY0110_22961	-336	3.4	TAAGACAAATGTCAACATT
		-315	2.9	GTTAAAAAAATATTTTTAT
		-314	3	TTAAAAAAATATTTTTATA
		-311	3	AAAAAATATTTTTATATAT
		-304	3	ATTTTTATATATTACTTTT
		-287	3.3	TTTGTGAATAAAGAGCAAA
		-220	3.2	ATCAAGAATGAGCCTAATT
		-214	3.9	AATGAGCCTAATTTTAATT
		-211	2.9	GAGCCTAATTTTAATTATT
		-208	2.9	CCTAATTTTAATTATTGTT
		-205	3.4	AATTTTAATTATTGTTAAG
		-166	3.1	TCTAAGACTTATCATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002	SYNPCC7002_A1961	-206	3.4	AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142	cce_0989	-205	3.4	AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843	MAE_47560	-297	3.2	ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120	alr5154	-177	3.4	ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101	Tery_4669	-80	4	ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942	Synpcc7942_2049	-296	3.3	TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421	gvip470	-195	2.2	TTTTTAAAAATTGTTAAGT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fur regulog to Cyanothece sp. CCY 0110

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --