Propagation of NtcA regulog to Nostoc sp. PCC 7120
| Source regulog: | NtcA - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Nitrogen assimilation |
| Effector: | 2-oxoglutarate |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Nostoc sp. PCC 7120 |
| Orthologous TF(s) | alr4392 |
| Regulated genes | 40 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: 17
Score: 3.7 Sequence: AGTTACAGATTCTACT
Locus tag: alr0052
|
||||
| alr0052 | 17 | 3.7 | AGTTACAGATTCTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: trxA | ||||
| Ortholog function: Thioredoxin-1 | ||||
| Nostoc sp. PCC 7120 | alr0052 | 17 | 3.7 | AGTTACAGATTCTACT |
| Gloeobacter violaceus PCC 7421 | gll0880 | -379 | 3.6 | TGTATCTAGAACTAGC |
|
Position: -107
Score: 3.7 Sequence: CGTATAGCAAAATACA
Position: 21
Score: 4.1 Sequence: TCTATCAATTACTACT
Locus tag: asr0064
|
||||
| asr0064 | -107 | 3.7 | CGTATAGCAAAATACA | |
| 21 | 4.1 | TCTATCAATTACTACT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0076 | ||||
| Ortholog function: hypothetical protein | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_0729 | -128 | 4.3 | TGTAACATTTGTTATT |
| -71 | 4.1 | AGTATTGGTGGATACA | ||
| Nostoc sp. PCC 7120 | asr0064 | -107 | 3.7 | CGTATAGCAAAATACA |
| Trichodesmium erythraeum IMS101 | Tery_2891 | -191 | 4.1 | TGTAATTTAGACAACA |
| -110 | 4.6 | TGTAACTATATATACT | ||
| Thermosynechococcus elongatus BP-1 | tsr2448 | -63 | 4.1 | AGTATTGGATATTACA |
|
Position: -80
Score: 4.5 Sequence: TGTAACAAAATCTACC
Position: -21
Score: 4.7 Sequence: TGTAATTAAGGCTACA
Locus tag: all0602
|
||||
| all0602 | -80 | 4.5 | TGTAACAAAATCTACC | |
| -21 | 4.7 | TGTAATTAAGGCTACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ntcB | ||||
| Ortholog function: Nitrogen assimilation transcriptional activator, LysR family | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1632 | -87 | 3.9 | TGTAACATccGgaACA |
| Cyanothece sp. ATCC 51142 | cce_0198 | -73 | 4.2 | AGTATCAATTTCTACG |
| Cyanothece sp. PCC 8801 | PCC8801_2329 | -80 | 4.7 | TGTATCAAATTCTACT |
| Cyanothece sp. PCC 7425 | Cyan7425_1599 | -78 | 4.6 | TGTATCACTATCTACA |
| Microcystis aeruginosa NIES-843 | MAE_09380 | -80 | 4.1 | gGTAgCAatTtcTACc |
| Nostoc sp. PCC 7120 | all0602 | -80 | 4.5 | TGTAACAAAATCTACC |
| -21 | 4.7 | TGTAATTAAGGCTACA | ||
| Trichodesmium erythraeum IMS101 | Tery_4333 | -27 | 4 | TGTATAAAATAACACA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1242 | -153 | 4.3 | AGTAATCATTGATACT |
| -82 | 4.9 | AGTAGCAATTGCTACA | ||
| Synechococcus sp. JA-3-3Ab | CYA_0984 | -89 | 4.2 | TGTAACGGTGTTTACA |
| Gloeobacter violaceus PCC 7421 | gvip213 | -46 | 4 | CGTAACCCCAGATACA |
| Thermosynechococcus elongatus BP-1 | null | -122 | 3.9 | TGTATCAATCAACACA |
|
Position: -250
Score: 4.7 Sequence: TGTATTAACTAATACA
Locus tag: alr0990
|
||||
| alr0990 | -250 | 4.7 | TGTATTAACTAATACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amt1 | ||||
| Ortholog function: ammonium transporter | ||||
| Nostoc sp. PCC 7120 | alr0990 | -250 | 4.7 | TGTATTAACTAATACA |
|
Position: -50
Score: 4.7 Sequence: TGTAACTAAGTATACA
Locus tag: alr0992
|
||||
| alr0992 | -50 | 4.7 | TGTAACTAAGTATACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amt1 | ||||
| Ortholog function: ammonium transporter | ||||
| Nostoc sp. PCC 7120 | alr0992 | -50 | 4.7 | TGTAACTAAGTATACA |
|
Position: -146
Score: 4.7 Sequence: TGTAGCTTAAATTACT
Locus tag: all1127
|
||||
| all1127 | -146 | 4.7 | TGTAGCTTAAATTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndh | ||||
| Ortholog function: NADH dehydrogenase, type II | ||||
| Nostoc sp. PCC 7120 | all1127 | -146 | 4.7 | TGTAGCTTAAATTACT |
|
Position: -161
Score: 3.4 Sequence: TGTTACAAAAATTAGG
Locus tag: all1258
|
||||
| all1258 | -161 | 3.4 | TGTTACAAAAATTAGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbZ | ||||
| Ortholog function: Photosystem II reaction center protein Z | ||||
| Cyanothece sp. ATCC 51142 | cce_3633 | -20 | 4.2 | TGTAACTGTATTAACA |
| Nostoc sp. PCC 7120 | all1258 | -161 | 3.4 | TGTTACAAAAATTAGG |
|
Position: -52
Score: 4.3 Sequence: CGTAGTGTATGTTACA
Locus tag: all1327
|
||||
| all1327 | -52 | 4.3 | CGTAGTGTATGTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0264 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0264 | -29 | 5 | TGTATCAAATACTACA |
| Microcystis aeruginosa NIES-843 | MAE_18580 | -68 | 4.8 | TGTATCTTTAGCTACT |
| Nostoc sp. PCC 7120 | all1327 | -52 | 4.3 | CGTAGTGTATGTTACA |
|
Position: -32
Score: 3.6 Sequence: AGTAAAAAGAGTGACA
Locus tag: alr1524
|
||||
| alr1524 | -32 | 3.6 | AGTAAAAAGAGTGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbcL | ||||
| Ortholog function: RuBisCO large subunit (EC 4.1.1.39) | ||||
| Synechocystis sp. PCC 6803 | slr0009 | -228 | 4.3 | TGTAATTTAAAAAACA |
| Nostoc sp. PCC 7120 | alr1524 | -32 | 3.6 | AGTAAAAAGAGTGACA |
| Trichodesmium erythraeum IMS101 | Tery_4410 | -293 | 3.4 | GATAACTATTACTACG |
|
Position: 14
Score: 3.9 Sequence: AATAGCGAAAGATACA
Locus tag: alr1525
|
||||
| alr1525 | 14 | 3.9 | AATAGCGAAAGATACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbcX | ||||
| Ortholog function: Predicted RuBisCo chaperone | ||||
| Nostoc sp. PCC 7120 | alr1525 | -32 | 3.6 | AGTAAAAAGAGTGACA |
|
Position: -218
Score: 4.1 Sequence: TGTAGCTTGAGATTCA
Locus tag: all1691
|
||||
| all1691 | -218 | 4.1 | TGTAGCTTGAGATTCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fur | ||||
| Ortholog function: Ferric uptake regulator, Fur family | ||||
| Nostoc sp. PCC 7120 | all1691 | -218 | 4.1 | TGTAGCTTGAGATTCA |
|
Position: -6
Score: 3.4 Sequence: TGAAATATGTACAACA
Locus tag: alr1827
|
||||
| alr1827 | -6 | 3.4 | TGAAATATGTACAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: icd | ||||
| Ortholog function: Isocitrate dehydrogenase (NADP+) | ||||
| Microcystis aeruginosa NIES-843 | MAE_62530 | -30 | 3.7 | CGTATAGATAAATACT |
| Nostoc sp. PCC 7120 | alr1827 | -6 | 3.4 | TGAAATATGTACAACA |
|
Position: -281
Score: 3.2 Sequence: TGAATTTGATGTAACC
Locus tag: alr1911
|
||||
| alr1911 | -281 | 3.2 | TGAATTTGATGTAACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifJ | ||||
| Ortholog function: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1443 | -272 | 4.1 | TTTATCATTTTCTACA |
| Synechocystis sp. PCC 6803 | sll0741 | -181 | 3.3 | AGAATCAACAAAAACA |
| Cyanothece sp. ATCC 51142 | cce_0953 | -52 | 3.8 | TGCAACAAAAATTACC |
| Cyanothece sp. PCC 8801 | PCC8801_3918 | -265 | 3.5 | AGTAACCATAATTATT |
| Cyanothece sp. PCC 7425 | Cyan7425_4369 | -120 | 3.1 | TCTAACGTATTCTCCA |
| Nostoc sp. PCC 7120 | alr1911 | -281 | 3.2 | TGAATTTGATGTAACC |
|
Position: 23
Score: 3.7 Sequence: TGTATTTAATGGTATT
Locus tag: all1950
|
||||
| all1950 | 23 | 3.7 | TGTATTTAATGGTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: urtB | ||||
| Ortholog function: Urea ABC transporter, permease protein 1 | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0397 | -127 | 4.1 | TGTATCAAGTGTCACA |
| Cyanothece sp. PCC 7425 | Cyan7425_2259 | -148 | 3.7 | TGTATAATAGATCACA |
| Microcystis aeruginosa NIES-843 | MAE_06210 | -170 | 4.7 | AGTAGCAAAAATTACA |
| -140 | 4.6 | AGTAGCGAAAGTTACA | ||
| Nostoc sp. PCC 7120 | all1950 | -116 | 4.3 | AGTATCAAAAATAACA |
| Prochlorococcus marinus str. MIT 9313 | PMT2228 | -146 | 4 | TGTTGCAACAGCTACC |
| -95 | 4.7 | TGTATCATTCACTACA | ||
| Synechococcus sp. JA-3-3Ab | CYA_1923 | -272 | 3.7 | GGTATCCCGCGATACA |
| Synechococcus sp. WH 8102 | SYNW2441 | -118 | 4 | TGTTGCAACAGCTACC |
| Thermosynechococcus elongatus BP-1 | tlr1121 | -81 | 4 | TGTAGCCTAGCATACA |
|
Position: -116
Score: 4.3 Sequence: AGTATCAAAAATAACA
Locus tag: all1951
|
||||
| all1951 | -116 | 4.3 | AGTATCAAAAATAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: urtA | ||||
| Ortholog function: Urea ABC transporter, substrate-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0398 | -127 | 4.1 | TGTATCAAGTGTCACA |
| Synechocystis sp. PCC 6803 | slr0447 | -211 | 4.5 | GGTATCCTATGCTACA |
| Cyanothece sp. PCC 7425 | Cyan7425_2260 | -148 | 3.7 | TGTATAATAGATCACA |
| Microcystis aeruginosa NIES-843 | MAE_06220 | -170 | 4.7 | AGTAGCAAAAATTACA |
| -140 | 4.6 | AGTAGCGAAAGTTACA | ||
| Nostoc sp. PCC 7120 | all1951 | -116 | 4.3 | AGTATCAAAAATAACA |
| Trichodesmium erythraeum IMS101 | Tery_0130 | -390 | 3.8 | AGTTACAAAAAAAACA |
| Synechococcus sp. JA-3-3Ab | CYA_1924 | -272 | 3.7 | GGTATCCCGCGATACA |
| Thermosynechococcus elongatus BP-1 | tlr1120 | -81 | 4 | TGTAGCCTAGCATACA |
|
Position: -214
Score: 3.8 Sequence: AGTTACACAGACTACA
Locus tag: all2319
|
||||
| all2319 | -214 | 3.8 | AGTTACACAGACTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnB | ||||
| Ortholog function: nitrogen regulatory protein P-II | ||||
| Synechocystis sp. PCC 6803 | ssl0707 | -184 | 3.7 | GGTACTGATTTTTACA |
| Nostoc sp. PCC 7120 | all2319 | -214 | 3.8 | AGTTACACAGACTACA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_0321 | -103 | 4.8 | TGTAGCAGTAACTACA |
| Synechococcus sp. JA-3-3Ab | CYA_1508 | -74 | 4.5 | TGTATCCGTTTTTACA |
| Thermosynechococcus elongatus BP-1 | tll0591 | -80 | 5.1 | TGTAGCTATTGCTACA |
|
Position: -233
Score: 4.8 Sequence: TGTAGTCTTTGTTACA
Locus tag: all2327
|
||||
| all2327 | -233 | 4.8 | TGTAGTCTTTGTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: apcF | ||||
| Ortholog function: phycobilisome core component | ||||
| Cyanothece sp. ATCC 51142 | cce_1944 | -177 | 3.8 | TGTGATAAGAAATACA |
| Cyanothece sp. PCC 8801 | PCC8801_0807 | -251 | 4 | TGTATACCATGATACG |
| Cyanothece sp. PCC 7425 | Cyan7425_1838 | -281 | 4.9 | TGTATCATGAGTTACA |
| Nostoc sp. PCC 7120 | all2327 | -233 | 4.8 | TGTAGTCTTTGTTACA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2158 | -214 | 4.8 | TGTAACAGCTGATACA |
|
Position: -142
Score: 4.8 Sequence: TGTAACAAAGACTACA
Position: -7
Score: 3.6 Sequence: AGTAACAATGACAACC
Locus tag: alr2328
|
||||
| alr2328 | -142 | 4.8 | TGTAACAAAGACTACA | |
| -7 | 3.6 | AGTAACAATGACAACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnA | ||||
| Ortholog function: glutamine synthetase, type I | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1630 | -125 | 3.5 | TGTgACccAgacTACA |
| Synechocystis sp. PCC 6803 | slr1756 | -98 | 4.3 | GGTAGCGAAAAATACA |
| Cyanothece sp. ATCC 51142 | cce_4432 | -89 | 4.5 | AGTATCCAATTATACA |
| -30 | 4 | TGTATATATTGAAACC | ||
| Cyanothece sp. PCC 8801 | PCC8801_0808 | -92 | 4 | CGTATCATGGTATACA |
| Cyanothece sp. PCC 7425 | Cyan7425_1839 | -221 | 4.9 | TGTAACTCATGATACA |
| Microcystis aeruginosa NIES-843 | MAE_19270 | -92 | 4.7 | TGTATCgaAaaATACA |
| Nostoc sp. PCC 7120 | alr2328 | -142 | 4.8 | TGTAACAAAGACTACA |
| Trichodesmium erythraeum IMS101 | Tery_3834 | -250 | 4 | CGTAACACCCGATACA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2156 | -194 | 4.8 | TGTATCAgcTGTTACA |
| Prochlorococcus marinus str. MIT 9313 | PMT0601 | -79 | 4.2 | GGTACCTGTTGCTACA |
| Synechococcus sp. JA-3-3Ab | CYA_1363 | -138 | 4.3 | CGTATCAGAAACTACA |
| Gloeobacter violaceus PCC 7421 | gvip146 | -116 | 4 | CGTATCTCAGACTACA |
|
Position: -78
Score: 4.7 Sequence: CGTAGCATAAGATACA
Locus tag: asl2329
|
||||
| asl2329 | -78 | 4.7 | CGTAGCATAAGATACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gifA | ||||
| Ortholog function: glutamine synthetase inactivating factor IF | ||||
| Nostoc sp. PCC 7120 | asl2329 | -78 | 4.7 | CGTAGCATAAGATACA |
|
Position: -291
Score: 3.5 Sequence: AGAAGTAGAAGCTACT
Locus tag: alr2514
|
||||
| alr2514 | -291 | 3.5 | AGAAGTAGAAGCTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxB | ||||
| Ortholog function: Cytochrome c oxidase subunit 2 (EC 1.9.3.1) | ||||
| Nostoc sp. PCC 7120 | alr2514 | -291 | 3.5 | AGAAGTAGAAGCTACT |
|
Position: -127
Score: 3.2 Sequence: TTTTATAAAAGCAACA
Locus tag: alr2803
|
||||
| alr2803 | -127 | 3.2 | TTTTATAAAAGCAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifJ | ||||
| Ortholog function: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1443 | -272 | 4.1 | TTTATCATTTTCTACA |
| Synechocystis sp. PCC 6803 | sll0741 | -181 | 3.3 | AGAATCAACAAAAACA |
| Cyanothece sp. ATCC 51142 | cce_0953 | -52 | 3.8 | TGCAACAAAAATTACC |
| Cyanothece sp. PCC 8801 | PCC8801_3918 | -265 | 3.5 | AGTAACCATAATTATT |
| Cyanothece sp. PCC 7425 | Cyan7425_4369 | -120 | 3.1 | TCTAACGTATTCTCCA |
| Nostoc sp. PCC 7120 | alr1911 | -281 | 3.2 | TGAATTTGATGTAACC |
|
Position: -279
Score: 3.6 Sequence: GGTATTTTTTCCTACT
Locus tag: asr3935
|
||||
| asr3935 | -279 | 3.6 | GGTATTTTTTCCTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hanA | ||||
| Ortholog function: DNA binding protein HU | ||||
| Nostoc sp. PCC 7120 | asr3935 | -279 | 3.6 | GGTATTTTTTCCTACT |
|
Position: -250
Score: 4.6 Sequence: TGTAGTGATAGCTACA
Locus tag: alr3982
|
||||
| alr3982 | -250 | 4.6 | TGTAGTGATAGCTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A1954 | ||||
| Ortholog function: putative two-component sensor histidine kinase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_3053 | -198 | 4.8 | TGTAATCATAGTTACA |
| Microcystis aeruginosa NIES-843 | MAE_14410 | -75 | 3.7 | TGTAAACTGGGAAACA |
| Nostoc sp. PCC 7120 | alr3982 | -250 | 4.6 | TGTAGTGATAGCTACA |
| Trichodesmium erythraeum IMS101 | Tery_3912 | -156 | 4.3 | TGTAGTTATGGCTACC |
|
Position: -178
Score: 3.5 Sequence: TGTAAAAAATAGTATT
Position: -37
Score: 3.7 Sequence: AGTATTTCTGGCAACA
Locus tag: all4001
|
||||
| all4001 | -178 | 3.5 | TGTAAAAAATAGTATT | |
| -37 | 3.7 | AGTATTTCTGGCAACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: isiA | ||||
| Ortholog function: Iron-stress chlorophyll-binding protein | ||||
| Nostoc sp. PCC 7120 | all4001 | -37 | 3.7 | AGTATTTCTGGCAACA |
| Trichodesmium erythraeum IMS101 | Tery_1667 | -134 | 3.6 | AGTAATTGATCATACT |
| Thermosynechococcus elongatus BP-1 | null | -195 | 3.8 | AGTTTCTGGAAATACA |
|
Position: -260
Score: 4 Sequence: TGTCTTATAAAATACA
Locus tag: alr4156
|
||||
| alr4156 | -260 | 4 | TGTCTTATAAAATACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndhF | ||||
| Ortholog function: NAD(P)H dehydrogenase subunit (EC 1.6.99.5) | ||||
| Synechocystis sp. PCC 6803 | sll1732 | -244 | 4 | TGTAACAAATAACACT |
| Cyanothece sp. PCC 8801 | PCC8801_4247 | -238 | 3.6 | CGTATTATGAGTTAGA |
| Nostoc sp. PCC 7120 | alr4156 | -260 | 4 | TGTCTTATAAAATACA |
| Thermosynechococcus elongatus BP-1 | null | -220 | 3.6 | GGTAACTTTTGCTATG |
|
Position: -64
Score: 3.9 Sequence: GGTAGTCGGAGTTACA
Locus tag: alr4308
|
||||
| alr4308 | -64 | 3.9 | GGTAGTCGGAGTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A2395 | ||||
| Ortholog function: hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2395 | -200 | 4.5 | TGTTACTTAAATTACA |
| -92 | 4.5 | TGTAGTAGACGTTACA | ||
| Cyanothece sp. ATCC 51142 | cce_2729 | -148 | 4 | TGTAACATATGATAAC |
| -87 | 4.6 | TGTAATATTGATTACA | ||
| Cyanothece sp. PCC 8801 | PCC8801_2066 | -53 | 4.8 | TGTAATATTAATTACA |
| Cyanothece sp. PCC 7425 | Cyan7425_0833 | -38 | 3.7 | AGTAGTTTAATAAACT |
| Microcystis aeruginosa NIES-843 | MAE_38700 | -87 | 4.2 | TGTAATCATCTTTACA |
| Nostoc sp. PCC 7120 | alr4308 | -64 | 3.9 | GGTAGTCGGAGTTACA |
| Trichodesmium erythraeum IMS101 | Tery_0672 | -94 | 4.3 | AGTATTCAAAATTACA |
| Synechococcus sp. JA-3-3Ab | CYA_0570 | -139 | 3.9 | GGTAAGATAAAATACA |
| -81 | 4.2 | CGTATCAAAGGCTACT | ||
| Thermosynechococcus elongatus BP-1 | tlr1468 | -85 | 4.3 | TGTAGTTGAGTTTACA |
|
Position: -75
Score: 4.5 Sequence: AGTAACAAAGACTACA
Locus tag: all4312
|
||||
| all4312 | -75 | 4.5 | AGTAACAAAGACTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrrA | ||||
| Ortholog function: Transcriptional regulator, OmpR family | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0496 | -75 | 4.1 | CGTAACCACGGTTACA |
| Synechocystis sp. PCC 6803 | sll1330 | -75 | 4.6 | GGTAACTGTTGTTACA |
| Cyanothece sp. ATCC 51142 | cce_1808 | -76 | 4.3 | CGTAGCCGATGTTACA |
| Cyanothece sp. PCC 8801 | PCC8801_3375 | -76 | 4.5 | CGTAGCAGATGTTACA |
| Cyanothece sp. PCC 7425 | Cyan7425_0851 | -82 | 4.1 | AGTAGCTAGAGTTACG |
| Nostoc sp. PCC 7120 | all4312 | -75 | 4.5 | AGTAACAAAGACTACA |
| Trichodesmium erythraeum IMS101 | Tery_0675 | -89 | 4.7 | AGTAGCTTCTGTTACA |
| Thermosynechococcus elongatus BP-1 | tlr1330 | -138 | 4 | AGTATTATTCGTTACG |
|
Position: -265
Score: 3.5 Sequence: TGGAAAAATTAAAACA
Locus tag: alr4344
|
||||
| alr4344 | -265 | 3.5 | TGGAAAAATTAAAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltS | ||||
| Ortholog function: Glutamate synthase (NADPH dependent) large chain (EC 1.4.1.13) | ||||
| Nostoc sp. PCC 7120 | alr4344 | -265 | 3.5 | TGGAAAAATTAAAACA |
| Trichodesmium erythraeum IMS101 | Tery_0466 | -228 | 4.2 | TGTATCCTAGGCAACA |
|
Position: -151
Score: 3.7 Sequence: GGTATCATTATGAACA
Position: -111
Score: 3.7 Sequence: AGTATAGGAAAGTACA
Locus tag: alr4392
|
||||
| alr4392 | -151 | 3.7 | GGTATCATTATGAACA | |
| -111 | 3.7 | AGTATAGGAAAGTACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ntcA | ||||
| Ortholog function: Global nitrogen transcription regulator, Crp family | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1675 | -177 | 3.9 | TGAAGCAAAAAGTACA |
| Cyanothece sp. PCC 7425 | Cyan7425_0755 | -173 | 4.8 | TGTATCCGATGATACA |
| Nostoc sp. PCC 7120 | alr4392 | -151 | 3.7 | GGTATCATTATGAACA |
| -111 | 3.7 | AGTATAGGAAAGTACA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_0127 | -157 | 4.7 | AGTAGCAGTTGCTACA |
| Synechococcus sp. JA-3-3Ab | CYA_1799 | -181 | 4.7 | TGTAGCTCCTGCTACA |
| Gloeobacter violaceus PCC 7421 | gvip454 | -77 | 3.9 | AGTAGTCCCTAATACA |
|
Position: -48
Score: 4.1 Sequence: AATAACAACTGTTACA
Locus tag: all4968
|
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| all4968 | -48 | 4.1 | AATAACAACTGTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gor | ||||
| Ortholog function: glutathione reductase | ||||
| Nostoc sp. PCC 7120 | all4968 | -48 | 4.1 | AATAACAACTGTTACA |
| Trichodesmium erythraeum IMS101 | Tery_4747 | -208 | 3.9 | TGTAGTCGTAGATATA |
| -120 | 4.7 | TGTAACTAATTATACT | ||