Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Nostoc sp. PCC 7120

Reference regulog properties
Source regulog: Zur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Nostoc sp. PCC 7120
Orthologous TF(s) all2473
Regulated genes 9
Built upon 84 sites [see more]
Predicted regulatory interactions in Nostoc sp. PCC 7120
Locus tag Position Score Sequence
Position: -110
Score: 6.2
Sequence: ATGAGAATGAGAATTATTATAAT
Locus tag: all0833
all0833 -110 6.2 ATGAGAATGAGAATTATTATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_4862 -72 6.1 AAATTAACGATAATCATTCTCAT
-46 6.4 ATAATAATGGTTATCATTTTAAT
Cyanothece sp. PCC 7425 Cyan7425_1915 -104 6.4 AAGGCAATGATAATCATTATCAT
Nostoc sp. PCC 7120 all0833 -110 6.2 ATGAGAATGAGAATTATTATAAT
-80 5 TGTACAATAAGTATCATTGTCAA
Trichodesmium erythraeum IMS101 Tery_4951 -49 6.9 AAAAGAATGATAATCATTATCAT
Synechococcus sp. JA-3-3Ab CYA_2532 -39 5.7 TTATGATTGATTATCATTCTCAT
Thermosynechococcus elongatus BP-1 tlr2062 -31 6.3 ATGAGAATGATTATCATTCATCT
Position: -23
Score: 6.1
Sequence: ATGAAAATGATTATCATTTAAAA
Locus tag: alr1197
alr1197 -23 6.1 ATGAAAATGATTATCATTTAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: alr1197
Ortholog function: Putative metallochaperone, similar to COG0523 family
Nostoc sp. PCC 7120 alr1197 -29 4.4 AACTGCATGAAAATGATTATCAT
-23 6.1 ATGAAAATGATTATCATTTAAAA
Position: -44
Score: 5
Sequence: GTGATAATGATTATCCGTATGGT
Locus tag: all1751
all1751 -44 5 GTGATAATGATTATCCGTATGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC2
Ortholog function: Putative zinc chaperone, COG0523 family
Cyanothece sp. ATCC 51142 cce_1488 -77 6.1 TTGAGAATGATTATTATTCTTAA
-38 6.2 ATGAAAATGATTATCATTTTAGA
Cyanothece sp. PCC 8801 PCC8801_0862 -76 5.4 TTGAGAATGATTCTTATTCTTGA
-38 5.7 ATGAGAGTGATTATCATTCTAGA
Nostoc sp. PCC 7120 all1751 -44 5 GTGATAATGATTATCCGTATGGT
Position: -266
Score: 5.6
Sequence: GTAAACATGATAATCATTATCAA
Locus tag: alr3242
alr3242 -266 5.6 GTAAACATGATAATCATTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: alr3242
Ortholog function: Zinc-regulated TonB-dependent outer mambrane receptor
Nostoc sp. PCC 7120 alr3242 -266 5.6 GTAAACATGATAATCATTATCAA
-260 4.3 ATGATAATCATTATCAAAAAATG
Position: -52
Score: 5.4
Sequence: CTGATTATGATAATCATTATCGG
Locus tag: all3515
all3515 -52 5.4 CTGATTATGATAATCATTATCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: all3515
Ortholog function: Putative outer membrane protein
Nostoc sp. PCC 7120 all3515 -52 5.4 CTGATTATGATAATCATTATCGG
Position: -122
Score: 5.9
Sequence: GTGATAATAATAATCATTATCTA
Locus tag: alr4028
alr4028 -122 5.9 GTGATAATAATAATCATTATCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp
Ortholog function: Zinc-regulated TonB-dependent outer mambrane receptor
Nostoc sp. PCC 7120 alr4028 -122 5.9 GTGATAATAATAATCATTATCTA
Nostoc sp. PCC 7120 alr4029 -122 5.9 GTGATAATAATAATCATTATCTA
Position: -28
Score: 5.9
Sequence: ATGATAACGATTCTCATTATTTA
Locus tag: all4723
all4723 -28 5.9 ATGATAACGATTCTCATTATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrS2
Ortholog function: Threonyl-tRNA synthetase (EC 6.1.1.3)
Cyanothece sp. ATCC 51142 cce_4835 28 6.3 ATGATAATGATTATTATTACAAT
Cyanothece sp. ATCC 51142 cce_1495 81 6.7 TTGATAATGATTATCATTTTTAT
127 6.9 ATAATAATGATTATCATTTTTAT
Microcystis aeruginosa NIES-843 MAE_31590 -34 6 GCTACAATGATAATCATTATCAT
Nostoc sp. PCC 7120 all4723 -28 5.9 ATGATAACGATTCTCATTATTTA
Position: -31
Score: 5.7
Sequence: ATGATAATGGTTATCAATCTTGT
Locus tag: all4725
all4725 -31 5.7 ATGATAATGGTTATCAATCTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemB2
Ortholog function: Porphobilinogen synthase (EC 4.2.1.24)
Synechococcus sp. PCC 7002 SYNPCC7002_G0127 -25 5.9 TCGAGAATGATTATCATTTTTTA
Cyanothece sp. ATCC 51142 cce_1489 -78 7.1 ATAATAATGATTATCATTATTAT
-32 5.9 ATAATAATGATTATCGTTTCTAA
Cyanothece sp. ATCC 51142 cce_4852 -72 6 TAAATAATAATAATCATTCTCGT
-46 6.6 ATAATAATGATTATCATTTTGAT
Cyanothece sp. PCC 8801 PCC8801_0777 -72 5.5 TTGATAATGATTATCATTCCGTG
-32 6.7 ATAATAATGATTATCATTTTTAA
Microcystis aeruginosa NIES-843 MAE_22850 -323 5.9 ATGATAACGATTATCATTCTAGG
Nostoc sp. PCC 7120 all4725 -31 5.7 ATGATAATGGTTATCAATCTTGT
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