Propagation of Zur regulog to Cyanothece sp. PCC 7425
| Source regulog: | Zur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Cyanothece sp. PCC 7425 |
| Orthologous TF(s) | Cyan7425_4383, Cyan7425_1917 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -32
Score: 4.9 Sequence: AAGATAAGAATTATTCTCATTTT
Position: -29
Score: 5.3 Sequence: ATAAGAATTATTCTCATTTTCAC
Locus tag: Cyan7425_0794
|
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| Cyan7425_0794 | -32 | 4.9 | AAGATAAGAATTATTCTCATTTT | |
| -29 | 5.3 | ATAAGAATTATTCTCATTTTCAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cce_1485 | ||||
| Ortholog function: Predicted Mn/Zn chelate ABC transporter, ATP-binding protein | ||||
| Cyanothece sp. ATCC 51142 | cce_1485 | -31 | 6.7 | ATGATAATGATAATCATTCTAGT |
| Cyanothece sp. PCC 8801 | PCC8801_0774 | -32 | 7 | ATGATAATGATAATCATTCTAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_0794 | -29 | 5.3 | ATAAGAATTATTCTCATTTTCAC |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1317 | -59 | 4.9 | TAGGGAATGATAACGATTCTCAA |
|
Position: -29
Score: 5.2 Sequence: TTGAAAATGAGAATGGTTCTTAT
Position: -23
Score: 4.9 Sequence: ATGAGAATGGTTCTTATTGTACA
Position: -6
Score: 5 Sequence: TGTACAATGAGAGTCATTATCAA
Position: 0
Score: 5 Sequence: ATGAGAGTCATTATCAATCTCAA
Locus tag: Cyan7425_0822
|
||||
| Cyan7425_0822 | -29 | 5.2 | TTGAAAATGAGAATGGTTCTTAT | |
| -23 | 4.9 | ATGAGAATGGTTCTTATTGTACA | ||
| -6 | 5 | TGTACAATGAGAGTCATTATCAA | ||
| 0 | 5 | ATGAGAGTCATTATCAATCTCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cce_1484 | ||||
| Ortholog function: Predicted Mn/Zn chelate ABC transporter, substrate-binding protein | ||||
| Cyanothece sp. ATCC 51142 | cce_1484 | -40 | 6.7 | ACTAGAATGATTATCATTATCAT |
| Cyanothece sp. PCC 8801 | PCC8801_0773 | -40 | 7 | ATTAGAATGATTATCATTATCAT |
| Cyanothece sp. PCC 7425 | Cyan7425_0822 | -29 | 5.2 | TTGAAAATGAGAATGGTTCTTAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1316 | -59 | 4.9 | TAGGGAATGATAACGATTCTCAA |
|
Position: -41
Score: 6.2 Sequence: TTGATAATGATTATCATTGTATA
Locus tag: Cyan7425_1909
|
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| Cyan7425_1909 | -41 | 6.2 | TTGATAATGATTATCATTGTATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yciC2 | ||||
| Ortholog function: Putative zinc chaperone, COG0523 family | ||||
| Cyanothece sp. PCC 7425 | Cyan7425_1909 | -41 | 6.2 | TTGATAATGATTATCATTGTATA |
|
Position: -62
Score: 6 Sequence: TATAGAATGATAATGATTATCAT
Position: -56
Score: 6.4 Sequence: ATGATAATGATTATCATTGCCTT
Locus tag: Cyan7425_1917
|
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| Cyan7425_1917 | -62 | 6 | TATAGAATGATAATGATTATCAT | |
| -56 | 6.4 | ATGATAATGATTATCATTGCCTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: zur | ||||
| Ortholog function: Zinc uptake transcription regulator, Fur family | ||||
| Synechocystis sp. PCC 6803 | sll1937 | -45 | 5.6 | CAATAAACGATAATCATTATCAT |
| Cyanothece sp. PCC 7425 | Cyan7425_1917 | -56 | 6.4 | ATGATAATGATTATCATTGCCTT |