Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Synechocystis sp. PCC 6803

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechocystis sp. PCC 6803
Orthologous TF(s) sll0567
Regulated genes 44
Built upon 167 sites [see more]
Predicted regulatory interactions in Synechocystis sp. PCC 6803
Locus tag Position Score Sequence
Position: -318
Score: 3.5
Sequence: AGTGATCAATTTCATTATT
Position: -311
Score: 3.9
Sequence: AATTTCATTATTTTTCATT
Position: -1
Score: 3.9
Sequence: AATGACAACGACTCTCCAA
Locus tag: slr1311
slr1311 -318 3.5 AGTGATCAATTTCATTATT
-311 3.9 AATTTCATTATTTTTCATT
-1 3.9 AATGACAACGACTCTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbA
Ortholog function: photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll1867 -124 3.4 ATTTACAAATTGTTACAAT
Position: -78
Score: 4.2
Sequence: ATTGATAATCTTTCCTAGT
Locus tag: slr1316
slr1316 -78 4.2 ATTGATAATCTTTCCTAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecC
Ortholog function: Fe(3+) dicitrate ABC transport system, permease protein 1
Synechococcus sp. PCC 7002 SYNPCC7002_G0088 -83 5.2 ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803 slr1316 -78 4.2 ATTGATAATCTTTCCTAGT
Nostoc sp. PCC 7120 all2586 -100 4.6 TCTTATATTAATTCTCAAT
-32 5 AATGACTATATTTTTCAAT
Position: -176
Score: 4.1
Sequence: ATTCCTAATTATTCTTAAC
Locus tag: slr1318
slr1318 -176 4.1 ATTCCTAATTATTCTTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecE
Ortholog function: Fe(3+) dicitrate ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_G0086 -83 5.2 ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803 slr1318 -176 4.1 ATTCCTAATTATTCTTAAC
Cyanothece sp. PCC 7425 Cyan7425_2416 -264 4.6 ATTGATGATTATTTTCAAC
Nostoc sp. PCC 7120 all2584 -100 4.6 TCTTATATTAATTCTCAAT
-32 5 AATGACTATATTTTTCAAT
Position: -21
Score: 3.7
Sequence: ATATCCATTAATTATCAGT
Locus tag: sll1409
sll1409 -21 3.7 ATATCCATTAATTATCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: Outer membrane ferrichrome-iron receptor
Synechocystis sp. PCC 6803 sll1409 -38 3.4 ATTAATAAAACTTTTTAAC
Position: -32
Score: 3.7
Sequence: TTTGATAAATTTCATAAAA
Locus tag: sll1408
sll1408 -32 3.7 TTTGATAAATTTCATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pchR
Ortholog function: Predicted siderophore synthesis regulator, AraC family
Synechocystis sp. PCC 6803 sll1408 -38 3.4 ATTAATAAAACTTTTTAAC
Nostoc sp. PCC 7120 alr2184 -39 5.1 ATTGAGAAATAATATTATT
Position: -38
Score: 3.4
Sequence: ATTAATAAAACTTTTTAAC
Position: -35
Score: 3.4
Sequence: AATAAAACTTTTTAACTTT
Locus tag: sll1406
sll1406 -38 3.4 ATTAATAAAACTTTTTAAC
-35 3.4 AATAAAACTTTTTAACTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: Outer membrane ferrichrome-iron receptor
Synechocystis sp. PCC 6803 sll1406 -38 3.4 ATTAATAAAACTTTTTAAC
Cyanothece sp. PCC 7425 Cyan7425_2439 -66 5.1 ATTGAGAGTATTTCTTATT
Position: -286
Score: 4.6
Sequence: TATGTGAAATATTATTATT
Position: -110
Score: 6
Sequence: ATTGAAAATAGTTATCAAT
Position: -64
Score: 4.6
Sequence: ATTGAGAATTACTCTTAAC
Locus tag: sll1404
sll1404 -286 4.6 TATGTGAAATATTATTATT
-110 6 ATTGAAAATAGTTATCAAT
-64 4.6 ATTGAGAATTACTCTTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: Iron-siderophore complex transporter
Synechococcus sp. PCC 7002 SYNPCC7002_G0137 -279 4.2 ATTAAGAGATTATCTCAAT
Synechocystis sp. PCC 6803 sll1404 -286 4.6 TATGTGAAATATTATTATT
-110 6 ATTGAAAATAGTTATCAAT
-64 4.6 ATTGAGAATTACTCTTAAC
Cyanothece sp. PCC 8801 PCC8801_3017 -38 5.7 ATTGATAACTTTTCTCAAT
Cyanothece sp. PCC 7425 Cyan7425_2418 -264 4.6 ATTGATGATTATTTTCAAC
Position: -255
Score: 5.6
Sequence: ATTGATAACTATTTTCAAT
Locus tag: slr1484
slr1484 -255 5.6 ATTGATAACTATTTTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0090
Ortholog function: TonB family protein
Synechocystis sp. PCC 6803 slr1484 -255 5.6 ATTGATAACTATTTTCAAT
Position: -46
Score: 3.1
Sequence: CTTGACTGTGAAATTTATT
Position: -26
Score: 3.4
Sequence: AACGTTAAAAATTAGCCGT
Position: -7
Score: 3.4
Sequence: TTTAATAATGTTTAAATTT
Locus tag: slr1485
slr1485 -46 3.1 CTTGACTGTGAAATTTATT
-26 3.4 AACGTTAAAAATTAGCCGT
-7 3.4 TTTAATAATGTTTAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0089
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_G0089 -83 5.2 ATTGAAATAAATTCTTATT
Synechocystis sp. PCC 6803 slr1485 -42 2.7 ACTGTGAAATTTATTTAAC
-9 2.2 GTTTTAATAATGTTTAAAT
Position: -76
Score: 5.6
Sequence: CTTGAAAATATTTATCATT
Locus tag: slr1489
slr1489 -76 5.6 CTTGAAAATATTTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pchR
Ortholog function: Predicted siderophore synthesis regulator, AraC family
Synechococcus sp. PCC 7002 SYNPCC7002_G0099 -94 3.7 ATTTCTTATTAATATAAAT
Cyanothece sp. PCC 7425 Cyan7425_2411 -71 4.9 ATTGTTAATCTTTTTCATT
Nostoc sp. PCC 7120 all2237 -40 5.1 TTTGAGAAAGTTTATCTAT
Position: -86
Score: 4.1
Sequence: TTTGAGAATTAGTTGCAGT
Locus tag: slr1490
slr1490 -86 4.1 TTTGAGAATTAGTTGCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: Outer membrane ferrichrome-iron receptor
Synechocystis sp. PCC 6803 slr1490 -86 4.1 TTTGAGAATTAGTTGCAGT
Position: -86
Score: 4.7
Sequence: AATCAGAAAATTACTCATT
Position: -44
Score: 4.9
Sequence: ATTGAGAATTACTTTTATT
Locus tag: slr1295
slr1295 -86 4.7 AATCAGAAAATTACTCATT
-44 4.9 ATTGAGAATTACTTTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Fe ABC transport system, substrate-binding protein
Synechocystis sp. PCC 6803 slr1295 -44 4.9 ATTGAGAATTACTTTTATT
Cyanothece sp. ATCC 51142 cce_2632 -20 4.8 ATCAATAATAATTTTCAAT
Cyanothece sp. PCC 8801 PCC8801_1443 -90 4 ATTAGGAATAATTAGCAAC
Position: -322
Score: 3.3
Sequence: TTTGACATCCACTTTCGGT
Position: -256
Score: 4.3
Sequence: AATGCTTAAGACTTTCAAT
Position: -244
Score: 3
Sequence: TTTCAATTTTATGTTAATT
Position: -238
Score: 3.1
Sequence: TTTTATGTTAATTTTTATG
Position: -235
Score: 3.3
Sequence: TATGTTAATTTTTATGTTC
Position: -232
Score: 3.1
Sequence: GTTAATTTTTATGTTCTTT
Locus tag: slr1055
slr1055 -322 3.3 TTTGACATCCACTTTCGGT
-256 4.3 AATGCTTAAGACTTTCAAT
-244 3 TTTCAATTTTATGTTAATT
-238 3.1 TTTTATGTTAATTTTTATG
-235 3.3 TATGTTAATTTTTATGTTC
-232 3.1 GTTAATTTTTATGTTCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlH
Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H
Synechococcus sp. PCC 7002 SYNPCC7002_A1018 -57 3.8 ATAGTTATAAATTTTTAAT
Cyanothece sp. ATCC 51142 cce_4358 -183 2.7 AATAAATAATTTTTGTAAA
-138 2.3 ATTTGTCAATATTTGTAAC
Cyanothece sp. PCC 8801 PCC8801_4320 -186 2.3 ATTTGTCAATATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_12190 -247 2.8 ATTAAATATTAATTTTTGT
Nostoc sp. PCC 7120 all4365 -272 2.9 GTTTTTTATTTTTTTCATC
-232 3 AATATTAATTTTTCTTTAC
Trichodesmium erythraeum IMS101 Tery_3224 -65 3 GTTTAAAATTTTTTGATAT
Position: -69
Score: 4.4
Sequence: TTTGATATTTATTCTGAAC
Position: -31
Score: 4.5
Sequence: GTTGAGAATTATTTGCAGT
Locus tag: ssr2333
ssr2333 -69 4.4 TTTGATATTTATTCTGAAC
-31 4.5 GTTGAGAATTATTTGCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: Ferrous iron transport protein A
Synechocystis sp. PCC 6803 ssr2333 -69 4.4 TTTGATATTTATTCTGAAC
-31 4.5 GTTGAGAATTATTTGCAGT
Cyanothece sp. ATCC 51142 cce_0033 -298 3.3 ATTAAAAAATACTGTTAAC
-47 4.5 GATAAGAATTATTCTTAAT
Trichodesmium erythraeum IMS101 Tery_2879 -270 3.5 TTTTCCAAATTTTTTCAGT
Position: 10
Score: 3.1
Sequence: ATTGCCAAAGGGGGTCAGT
Locus tag: slr1392
slr1392 10 3.1 ATTGCCAAAGGGGGTCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoB
Ortholog function: Ferrous iron transport protein B
Synechocystis sp. PCC 6803 slr1392 -278 4.5 GTTGAGAATTATTTGCAGT
Cyanothece sp. ATCC 51142 cce_0032 -298 3.3 ATTAAAAAATACTGTTAAC
-47 4.5 GATAAGAATTATTCTTAAT
Trichodesmium erythraeum IMS101 Tery_2878 -43 3 TATTACATAATTTTTATAT
Position: -59
Score: 4.2
Sequence: GTTGTTAAAATTTAACAAT
Position: -52
Score: 3.6
Sequence: AAATTTAACAATTCGCAAT
Position: -42
Score: 2.9
Sequence: ATTCGCAATAAATTTTAAC
Position: -39
Score: 3.1
Sequence: CGCAATAAATTTTAACAAT
Position: -32
Score: 2.9
Sequence: AATTTTAACAATTATCCCA
Locus tag: sll1911
sll1911 -59 4.2 GTTGTTAAAATTTAACAAT
-52 3.6 AAATTTAACAATTCGCAAT
-42 2.9 ATTCGCAATAAATTTTAAC
-39 3.1 CGCAATAAATTTTAACAAT
-32 2.9 AATTTTAACAATTATCCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0913
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0913 -146 2.2 TTTTTACAACATTTTTAAA
-68 3.8 AATGAGAAAATTTTGATAT
Synechocystis sp. PCC 6803 sll1911 -59 4.2 GTTGTTAAAATTTAACAAT
Cyanothece sp. ATCC 51142 cce_0019 -75 3.1 TTTTTTAATATTTTTTGAT
Cyanothece sp. PCC 8801 PCC8801_2812 -67 4.4 TATGATAAAATTTATTAAA
Trichodesmium erythraeum IMS101 Tery_4773 -64 2.4 TTTATGAAATATTTATGAT
Position: -227
Score: 2.9
Sequence: ATTAGCAACAGAAAACATT
Position: -174
Score: 3.2
Sequence: GAAGACAATGATTGCCATA
Position: -158
Score: 3.9
Sequence: ATAGAACAAATTTATCATA
Position: 17
Score: 3.3
Sequence: TGTCATAACCCTTCTCATC
Locus tag: slr1136
slr1136 -227 2.9 ATTAGCAACAGAAAACATT
-174 3.2 GAAGACAATGATTGCCATA
-158 3.9 ATAGAACAAATTTATCATA
17 3.3 TGTCATAACCCTTCTCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: coxB
Ortholog function: Cytochrome c oxidase, subunit II
Cyanothece sp. ATCC 51142 cce_1977 -136 3.7 AATTTCAATCAATTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0567 -152 2.7 TTTGTTTATTATTTGTTAC
Microcystis aeruginosa NIES-843 MAE_22930 -216 2.5 TTTTAGATATTCTTTAGAT
Nostoc sp. PCC 7120 alr0950 -134 3.7 TTTACTCAAGATTATTAAT
Position: -326
Score: 3.7
Sequence: ATTGCTATCAGTTGTAAGT
Position: -206
Score: 3
Sequence: ATTTTTAATTATTGTTACG
Position: -114
Score: 3
Sequence: GTTTAACATCGTTATTATG
Locus tag: slr1834
slr1834 -326 3.7 ATTGCTATCAGTTGTAAGT
-206 3 ATTTTTAATTATTGTTACG
-114 3 GTTTAACATCGTTATTATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -204
Score: 3
Sequence: AAGCTTAAAAATTAATATT
Position: -201
Score: 3.7
Sequence: CTTAAAAATTAATATTTTT
Position: -198
Score: 3
Sequence: AAAAATTAATATTTTTTTT
Position: -195
Score: 3.3
Sequence: AATTAATATTTTTTTTATA
Position: -194
Score: 3
Sequence: ATTAATATTTTTTTTATAA
Position: -192
Score: 3.1
Sequence: TAATATTTTTTTTATAATT
Position: -189
Score: 3.1
Sequence: TATTTTTTTTATAATTATT
Position: -185
Score: 2.9
Sequence: TTTTTTATAATTATTCTAT
Position: -183
Score: 3.7
Sequence: TTTTATAATTATTCTATCT
Position: -154
Score: 2.9
Sequence: CTAGAAAATGTTAAGCTAG
Position: -118
Score: 4.5
Sequence: AGTGCGGATCATTATCATT
Locus tag: slr1738
slr1738 -204 3 AAGCTTAAAAATTAATATT
-201 3.7 CTTAAAAATTAATATTTTT
-198 3 AAAAATTAATATTTTTTTT
-195 3.3 AATTAATATTTTTTTTATA
-194 3 ATTAATATTTTTTTTATAA
-192 3.1 TAATATTTTTTTTATAATT
-189 3.1 TATTTTTTTTATAATTATT
-185 2.9 TTTTTTATAATTATTCTAT
-183 3.7 TTTTATAATTATTCTATCT
-154 2.9 CTAGAAAATGTTAAGCTAG
-118 4.5 AGTGCGGATCATTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: Predicted peroxide stress response regulator, Fur family
Synechocystis sp. PCC 6803 slr1738 -194 3 ATTAATATTTTTTTTATAA
Cyanothece sp. PCC 7425 Cyan7425_1597 -88 4.9 TTTGAGAATTATACTAAAT
Position: -298
Score: 3.3
Sequence: AATGTAAAATATTTGCTAA
Position: -297
Score: 3.2
Sequence: ATGTAAAATATTTGCTAAT
Position: -287
Score: 3
Sequence: TTTGCTAATAATATGTAGA
Position: -189
Score: 3.3
Sequence: CAGGAGAACAAATATTGTT
Locus tag: sll0849
sll0849 -298 3.3 AATGTAAAATATTTGCTAA
-297 3.2 ATGTAAAATATTTGCTAAT
-287 3 TTTGCTAATAATATGTAGA
-189 3.3 CAGGAGAACAAATATTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -248
Score: 3.4
Sequence: ATTGCTATTCATCTTTAAA
Position: -236
Score: 3
Sequence: CTTTAAAACTGTTTTAAAA
Position: -20
Score: 3.8
Sequence: TTTGTTAATCAAAACCATT
Locus tag: sll1592
sll1592 -248 3.4 ATTGCTATTCATCTTTAAA
-236 3 CTTTAAAACTGTTTTAAAA
-20 3.8 TTTGTTAATCAAAACCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0062
Ortholog function: Two-component response regulator, LuxR family
Synechococcus sp. PCC 7002 SYNPCC7002_G0062 -62 4.1 ATTGATAAATAATTTAAGT
Cyanothece sp. ATCC 51142 cce_3895 16 2.8 GTTTAAAAATTCTTTTAGT
Cyanothece sp. PCC 8801 PCC8801_1927 -184 2 AATATTTTATATTTATAGT
Nostoc sp. PCC 7120 alr3156 -98 4.1 ATTACGAATTAATATAAAT
Position: -282
Score: 3
Sequence: ATGGGAAAAAAATCAAATT
Position: -254
Score: 3.1
Sequence: ATTTATCCATATCATCAGT
Position: -149
Score: 3.5
Sequence: ATTAAAGTTGTTTAGCTTT
Position: -100
Score: 3.5
Sequence: AACGAATAGATCTATCTTT
Position: -36
Score: 3.1
Sequence: AAAGCCATTTCTGTTCAAT
Position: 26
Score: 3
Sequence: GTTGTTGGCAATTCTTTTT
Locus tag: sll1590
sll1590 -282 3 ATGGGAAAAAAATCAAATT
-254 3.1 ATTTATCCATATCATCAGT
-149 3.5 ATTAAAGTTGTTTAGCTTT
-100 3.5 AACGAATAGATCTATCTTT
-36 3.1 AAAGCCATTTCTGTTCAAT
26 3 GTTGTTGGCAATTCTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_G0061
Ortholog function: Two-component sensor histidine kinase
Synechococcus sp. PCC 7002 SYNPCC7002_G0061 -62 4.1 ATTGATAAATAATTTAAGT
Cyanothece sp. PCC 8801 PCC8801_1928 -184 2 AATATTTTATATTTATAGT
Nostoc sp. PCC 7120 alr3155 -98 4.1 ATTACGAATTAATATAAAT
Position: -278
Score: 3
Sequence: CTGCTTAACATTTCTTAAT
Position: -275
Score: 3.1
Sequence: CTTAACATTTCTTAATAAT
Position: -268
Score: 3.2
Sequence: TTTCTTAATAATTTTAGTT
Position: -259
Score: 3.1
Sequence: AATTTTAGTTGCTATAAAT
Position: -252
Score: 5
Sequence: GTTGCTATAAATTCTCATT
Position: -207
Score: 4.4
Sequence: AGTGCTAAAGATTCTCAAC
Position: -161
Score: 2.9
Sequence: CTAGGGAAAGATTGGCGAT
Position: -46
Score: 4.6
Sequence: ATTGCCATAATTTATTATT
Locus tag: sll0247
sll0247 -278 3 CTGCTTAACATTTCTTAAT
-275 3.1 CTTAACATTTCTTAATAAT
-268 3.2 TTTCTTAATAATTTTAGTT
-259 3.1 AATTTTAGTTGCTATAAAT
-252 5 GTTGCTATAAATTCTCATT
-207 4.4 AGTGCTAAAGATTCTCAAC
-161 2.9 CTAGGGAAAGATTGGCGAT
-46 4.6 ATTGCCATAATTTATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: isiA
Ortholog function: Photosystem II chlorophyll-binding protein
Synechocystis sp. PCC 6803 sll0247 -269 2.8 ATTTCTTAATAATTTTAGT
Cyanothece sp. ATCC 51142 cce_1785 -18 4.4 ATTGCAAATCTTTTTAAAT
Cyanothece sp. PCC 7425 Cyan7425_2434 -61 4.7 ATTGAGTTTATTTCTCAAC
Nostoc sp. PCC 7120 all4001 -161 4.8 ATTAAGAATCTTTTTCAAT
Trichodesmium erythraeum IMS101 Tery_1667 -156 3.2 TTTTATAATTTCTTTTAAA
Synechococcus elongatus PCC 7942 Synpcc7942_1542 -45 5.2 ATTGAGAATTATTGTAAAT
Thermosynechococcus elongatus BP-1 null -121 5.5 AATGCTATTAATTCTCAAT
Position: -92
Score: 3
Sequence: ACTGCCATTTTTTGTCCAG
Position: -17
Score: 3.6
Sequence: CTTTCTTTTGATTCTCTAT
Locus tag: sll1899
sll1899 -92 3 ACTGCCATTTTTTGTCCAG
-17 3.6 CTTTCTTTTGATTCTCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaB
Ortholog function: Protoheme IX farnesyltransferase
Cyanothece sp. PCC 8801 PCC8801_0255 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22910 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1781 -41 4.1 AATTATAACCAGTTTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_2600 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1339 -30 2.6 ATTTAAATTATTTTATTGT
Position: -209
Score: 3
Sequence: AATAACTTCAAATTTAATT
Position: -130
Score: 3.2
Sequence: AATACCAAATTTTCCCGAT
Locus tag: sll1898
sll1898 -209 3 AATAACTTCAAATTTAATT
-130 3.2 AATACCAAATTTTCCCGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ctaA
Ortholog function: Heme A synthase
Cyanothece sp. PCC 8801 PCC8801_0256 -185 2.2 TTTTATTAACTTATGTAAA
Microcystis aeruginosa NIES-843 MAE_22920 -282 2.5 TCTTTTCAATATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_1780 -278 3.5 ATTGTTAAAATTATGAAAT
-167 3.3 ATTAAAAAAAAATTTAAAA
Synechococcus elongatus PCC 7942 Synpcc7942_2601 -158 4.3 GATGACAATATTTTTCGAT
Prochlorococcus marinus str. MIT 9313 PMT1340 -30 2.6 ATTTAAATTATTTTATTGT
Position: -130
Score: 4.9
Sequence: CTTGCAAATAATTCTTATT
Locus tag: sll1878
sll1878 -130 4.9 CTTGCAAATAATTCTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: afuC
Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A0871 -83 5.1 GTTGAGAATAGTTCTTAAT
Cyanothece sp. ATCC 51142 cce_3801 -163 4.2 ATTGAAAATTAATGCTAAT
Cyanothece sp. PCC 7425 Cyan7425_3510 -105 5.3 ATTGAGAATAATTTTCAAA
-60 4 GTTGAATAATAGTCTTAAT
Microcystis aeruginosa NIES-843 MAE_12460 -117 4.4 TTTGAGAAAGTTTCCTAAT
Trichodesmium erythraeum IMS101 Tery_3222 -94 5.1 AATGAAAAAAATATTCAAT
Synechococcus elongatus PCC 7942 Synpcc7942_1406 -81 4.2 ATTGAGAATAAATCGCAGA
Synechococcus sp. JA-3-3Ab CYA_2794 -26 3.8 AGTGAAAATCTTTTGCAAC
Gloeobacter violaceus PCC 7421 gll1012 -64 3.7 ATTGACAATTAATTGCAGC
Position: -124
Score: 3.4
Sequence: ATTTACAAATTGTTACAAT
Position: -1
Score: 3.9
Sequence: AATGACAACGACTCTCCAA
Locus tag: sll1867
sll1867 -124 3.4 ATTTACAAATTGTTACAAT
-1 3.9 AATGACAACGACTCTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbA
Ortholog function: photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll1867 -124 3.4 ATTTACAAATTGTTACAAT
Position: -187
Score: 4.1
Sequence: ATTGCACTTTATTTGCAAT
Locus tag: slr0513
slr0513 -187 4.1 ATTGCACTTTATTTGCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Fe ABC transport system, substrate-binding protein
Synechocystis sp. PCC 6803 slr0513 -240 3.9 AATAATAATCTCTTGCAAT
-187 4.1 ATTGCACTTTATTTGCAAT
Position: -334
Score: 3.4
Sequence: AATAAGAAAGTGTTCCATT
Position: -163
Score: 2.9
Sequence: CTTGACGTTGTTTAATTTT
Position: -153
Score: 3.4
Sequence: TTTAATTTTTCTTGGCATT
Position: -138
Score: 3.1
Sequence: CATTAGTGTTATTTTCAAC
Position: -18
Score: 3.1
Sequence: TTTGAGGACGATTCGTTTA
Position: -1
Score: 3.1
Sequence: TATGAGTTTACCTACCTAT
Locus tag: sll0741
sll0741 -334 3.4 AATAAGAAAGTGTTCCATT
-163 2.9 CTTGACGTTGTTTAATTTT
-153 3.4 TTTAATTTTTCTTGGCATT
-138 3.1 CATTAGTGTTATTTTCAAC
-18 3.1 TTTGAGGACGATTCGTTTA
-1 3.1 TATGAGTTTACCTACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifJ
Ortholog function: Pyruvate-flavodoxin oxidoreductase
Synechococcus sp. PCC 7002 SYNPCC7002_A1443 -165 2.2 TTTTCTTATAACTTTTAGC
Cyanothece sp. PCC 8801 PCC8801_3918 -67 3.4 TTTGTCAATAATTTGTAAC
Microcystis aeruginosa NIES-843 MAE_38140 -292 3.9 ATTCTGAATATTAATTAAT
Nostoc sp. PCC 7120 alr2803 -92 3.8 ATTTTTAATCAGTATTAAT
Position: -64
Score: 3.8
Sequence: TGGGAGAATGATTTTAATT
Position: -58
Score: 3.6
Sequence: AATGATTTTAATTGTTTAA
Position: 14
Score: 3.2
Sequence: CTGGGAAAACTTTCTCAAA
Locus tag: sll0497
sll0497 -64 3.8 TGGGAGAATGATTTTAATT
-58 3.6 AATGATTTTAATTGTTTAA
14 3.2 CTGGGAAAACTTTCTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2351
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2351 -216 2.9 TTTATTATTGTTTTTTAGT
Cyanothece sp. ATCC 51142 cce_3809 -132 3.2 GTTTTTATTTTCTGTCAAT
Cyanothece sp. PCC 8801 PCC8801_2575 -247 3.1 ATTTCTCCTTATTTTTAAT
Trichodesmium erythraeum IMS101 Tery_2644 -122 4.2 AATTAGATTAATTTTGAAT
Position: -139
Score: 3.7
Sequence: CTTTACAATGGATAACATT
Position: -132
Score: 3.2
Sequence: ATGGATAACATTAAGAAAA
Position: -123
Score: 4.2
Sequence: ATTAAGAAAAATTAAGATT
Position: -105
Score: 3.2
Sequence: TTCCCGGTTCTTTCTCATT
Position: -32
Score: 3
Sequence: CTTCGTAATTATTATTTTG
Locus tag: slr0927
slr0927 -139 3.7 CTTTACAATGGATAACATT
-132 3.2 ATGGATAACATTAAGAAAA
-123 4.2 ATTAAGAAAAATTAAGATT
-105 3.2 TTCCCGGTTCTTTCTCATT
-32 3 CTTCGTAATTATTATTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -247
Score: 4.3
Sequence: TTTTAGTACAACTCTCATT
Position: -173
Score: 3.3
Sequence: ATTTTATTTTTGTCTCAAT
Position: -141
Score: 3
Sequence: AAACACAAAATTTGTTTTT
Position: -88
Score: 3.2
Sequence: AATTAAAACGAATTTAAGT
Locus tag: slr0749
slr0749 -247 4.3 TTTTAGTACAACTCTCATT
-173 3.3 ATTTTATTTTTGTCTCAAT
-141 3 AAACACAAAATTTGTTTTT
-88 3.2 AATTAAAACGAATTTAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -317
Score: 3.1
Sequence: ATCGCCAAATTTTAGGCTT
Position: -261
Score: 3.3
Sequence: GTTGACTTTTATTGTCCAC
Position: -251
Score: 3.4
Sequence: ATTGTCCACAATTAAAATT
Position: -248
Score: 3.2
Sequence: GTCCACAATTAAAATTAAT
Position: -153
Score: 2.9
Sequence: GTTCATTATGTTTTACGAT
Position: -117
Score: 3
Sequence: ATTGATAATTTACCAAAAG
Position: -96
Score: 3.4
Sequence: TTAGAAAAAATTACTCAGA
Locus tag: slr0750
slr0750 -317 3.1 ATCGCCAAATTTTAGGCTT
-261 3.3 GTTGACTTTTATTGTCCAC
-251 3.4 ATTGTCCACAATTAAAATT
-248 3.2 GTCCACAATTAAAATTAAT
-153 2.9 GTTCATTATGTTTTACGAT
-117 3 ATTGATAATTTACCAAAAG
-96 3.4 TTAGAAAAAATTACTCAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase, subunit N
Synechococcus sp. PCC 7002 SYNPCC7002_A2345 -126 3.6 TTTTATAAAAACTCTAAGT
Cyanothece sp. ATCC 51142 cce_4534 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0789 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16250 -107 2.8 ATTAAGTAATTCTTTATAT
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -283
Score: 4.4
Sequence: TACGAGAAAAATTTTTATT
Position: -182
Score: 4
Sequence: TTAAAGAAATATTATTAAT
Position: -140
Score: 4
Sequence: AATGCCAATAATTATCTCG
Locus tag: slr1181
slr1181 -283 4.4 TACGAGAAAAATTTTTATT
-182 4 TTAAAGAAATATTATTAAT
-140 4 AATGCCAATAATTATCTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbA
Ortholog function: photosystem II, reaction center protein
Synechocystis sp. PCC 6803 slr1181 -242 2.8 ATTAAAATCTTTTTTTTAC
-182 4 TTAAAGAAATATTATTAAT
Position: -102
Score: 3.6
Sequence: TCTAGGATCTATTCTCAAT
Locus tag: sll0567
sll0567 -102 3.6 TCTAGGATCTATTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Ferric uptake regulator, Fur family
Synechococcus sp. PCC 7002 SYNPCC7002_A1649 -88 3.5 GTTAGTATTTATTTGCAAT
Cyanothece sp. ATCC 51142 cce_2330 -96 5.1 GTTGCTAATTATTTTCAAT
Cyanothece sp. PCC 8801 PCC8801_0870 -97 4.6 GTTGCAAATTATTTGCAAT
Trichodesmium erythraeum IMS101 Tery_1958 -44 4.7 ATTGTGTATCATTGTCAAT
Thermosynechococcus elongatus BP-1 null -59 4.4 CATTGTAATTATTCTCAAT