Propagation of Fur regulog to Synechocystis sp. PCC 6803
| Source regulog: | Fur - Cyanobacteria |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Cyanobacteria |
| Propagated regulon: | |
| Target genome | Synechocystis sp. PCC 6803 |
| Orthologous TF(s) | sll0567 |
| Regulated genes | 44 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -318
Score: 3.5 Sequence: AGTGATCAATTTCATTATT
Position: -311
Score: 3.9 Sequence: AATTTCATTATTTTTCATT
Position: -1
Score: 3.9 Sequence: AATGACAACGACTCTCCAA
Locus tag: slr1311
|
||||
| slr1311 | -318 | 3.5 | AGTGATCAATTTCATTATT | |
| -311 | 3.9 | AATTTCATTATTTTTCATT | ||
| -1 | 3.9 | AATGACAACGACTCTCCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbA | ||||
| Ortholog function: photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll1867 | -124 | 3.4 | ATTTACAAATTGTTACAAT |
|
Position: -78
Score: 4.2 Sequence: ATTGATAATCTTTCCTAGT
Locus tag: slr1316
|
||||
| slr1316 | -78 | 4.2 | ATTGATAATCTTTCCTAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fecC | ||||
| Ortholog function: Fe(3+) dicitrate ABC transport system, permease protein 1 | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0088 | -83 | 5.2 | ATTGAAATAAATTCTTATT |
| Synechocystis sp. PCC 6803 | slr1316 | -78 | 4.2 | ATTGATAATCTTTCCTAGT |
| Nostoc sp. PCC 7120 | all2586 | -100 | 4.6 | TCTTATATTAATTCTCAAT |
| -32 | 5 | AATGACTATATTTTTCAAT | ||
|
Position: -176
Score: 4.1 Sequence: ATTCCTAATTATTCTTAAC
Locus tag: slr1318
|
||||
| slr1318 | -176 | 4.1 | ATTCCTAATTATTCTTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fecE | ||||
| Ortholog function: Fe(3+) dicitrate ABC transport system, ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0086 | -83 | 5.2 | ATTGAAATAAATTCTTATT |
| Synechocystis sp. PCC 6803 | slr1318 | -176 | 4.1 | ATTCCTAATTATTCTTAAC |
| Cyanothece sp. PCC 7425 | Cyan7425_2416 | -264 | 4.6 | ATTGATGATTATTTTCAAC |
| Nostoc sp. PCC 7120 | all2584 | -100 | 4.6 | TCTTATATTAATTCTCAAT |
| -32 | 5 | AATGACTATATTTTTCAAT | ||
|
Position: -21
Score: 3.7 Sequence: ATATCCATTAATTATCAGT
Locus tag: sll1409
|
||||
| sll1409 | -21 | 3.7 | ATATCCATTAATTATCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuA | ||||
| Ortholog function: Outer membrane ferrichrome-iron receptor | ||||
| Synechocystis sp. PCC 6803 | sll1409 | -38 | 3.4 | ATTAATAAAACTTTTTAAC |
|
Position: -32
Score: 3.7 Sequence: TTTGATAAATTTCATAAAA
Locus tag: sll1408
|
||||
| sll1408 | -32 | 3.7 | TTTGATAAATTTCATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pchR | ||||
| Ortholog function: Predicted siderophore synthesis regulator, AraC family | ||||
| Synechocystis sp. PCC 6803 | sll1408 | -38 | 3.4 | ATTAATAAAACTTTTTAAC |
| Nostoc sp. PCC 7120 | alr2184 | -39 | 5.1 | ATTGAGAAATAATATTATT |
|
Position: -38
Score: 3.4 Sequence: ATTAATAAAACTTTTTAAC
Position: -35
Score: 3.4 Sequence: AATAAAACTTTTTAACTTT
Locus tag: sll1406
|
||||
| sll1406 | -38 | 3.4 | ATTAATAAAACTTTTTAAC | |
| -35 | 3.4 | AATAAAACTTTTTAACTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuA | ||||
| Ortholog function: Outer membrane ferrichrome-iron receptor | ||||
| Synechocystis sp. PCC 6803 | sll1406 | -38 | 3.4 | ATTAATAAAACTTTTTAAC |
| Cyanothece sp. PCC 7425 | Cyan7425_2439 | -66 | 5.1 | ATTGAGAGTATTTCTTATT |
|
Position: -286
Score: 4.6 Sequence: TATGTGAAATATTATTATT
Position: -110
Score: 6 Sequence: ATTGAAAATAGTTATCAAT
Position: -64
Score: 4.6 Sequence: ATTGAGAATTACTCTTAAC
Locus tag: sll1404
|
||||
| sll1404 | -286 | 4.6 | TATGTGAAATATTATTATT | |
| -110 | 6 | ATTGAAAATAGTTATCAAT | ||
| -64 | 4.6 | ATTGAGAATTACTCTTAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exbB | ||||
| Ortholog function: Iron-siderophore complex transporter | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0137 | -279 | 4.2 | ATTAAGAGATTATCTCAAT |
| Synechocystis sp. PCC 6803 | sll1404 | -286 | 4.6 | TATGTGAAATATTATTATT |
| -110 | 6 | ATTGAAAATAGTTATCAAT | ||
| -64 | 4.6 | ATTGAGAATTACTCTTAAC | ||
| Cyanothece sp. PCC 8801 | PCC8801_3017 | -38 | 5.7 | ATTGATAACTTTTCTCAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_2418 | -264 | 4.6 | ATTGATGATTATTTTCAAC |
|
Position: -255
Score: 5.6 Sequence: ATTGATAACTATTTTCAAT
Locus tag: slr1484
|
||||
| slr1484 | -255 | 5.6 | ATTGATAACTATTTTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_G0090 | ||||
| Ortholog function: TonB family protein | ||||
| Synechocystis sp. PCC 6803 | slr1484 | -255 | 5.6 | ATTGATAACTATTTTCAAT |
|
Position: -46
Score: 3.1 Sequence: CTTGACTGTGAAATTTATT
Position: -26
Score: 3.4 Sequence: AACGTTAAAAATTAGCCGT
Position: -7
Score: 3.4 Sequence: TTTAATAATGTTTAAATTT
Locus tag: slr1485
|
||||
| slr1485 | -46 | 3.1 | CTTGACTGTGAAATTTATT | |
| -26 | 3.4 | AACGTTAAAAATTAGCCGT | ||
| -7 | 3.4 | TTTAATAATGTTTAAATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_G0089 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0089 | -83 | 5.2 | ATTGAAATAAATTCTTATT |
| Synechocystis sp. PCC 6803 | slr1485 | -42 | 2.7 | ACTGTGAAATTTATTTAAC |
| -9 | 2.2 | GTTTTAATAATGTTTAAAT | ||
|
Position: -76
Score: 5.6 Sequence: CTTGAAAATATTTATCATT
Locus tag: slr1489
|
||||
| slr1489 | -76 | 5.6 | CTTGAAAATATTTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pchR | ||||
| Ortholog function: Predicted siderophore synthesis regulator, AraC family | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0099 | -94 | 3.7 | ATTTCTTATTAATATAAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_2411 | -71 | 4.9 | ATTGTTAATCTTTTTCATT |
| Nostoc sp. PCC 7120 | all2237 | -40 | 5.1 | TTTGAGAAAGTTTATCTAT |
|
Position: -86
Score: 4.1 Sequence: TTTGAGAATTAGTTGCAGT
Locus tag: slr1490
|
||||
| slr1490 | -86 | 4.1 | TTTGAGAATTAGTTGCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuA | ||||
| Ortholog function: Outer membrane ferrichrome-iron receptor | ||||
| Synechocystis sp. PCC 6803 | slr1490 | -86 | 4.1 | TTTGAGAATTAGTTGCAGT |
|
Position: -86
Score: 4.7 Sequence: AATCAGAAAATTACTCATT
Position: -44
Score: 4.9 Sequence: ATTGAGAATTACTTTTATT
Locus tag: slr1295
|
||||
| slr1295 | -86 | 4.7 | AATCAGAAAATTACTCATT | |
| -44 | 4.9 | ATTGAGAATTACTTTTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: Fe ABC transport system, substrate-binding protein | ||||
| Synechocystis sp. PCC 6803 | slr1295 | -44 | 4.9 | ATTGAGAATTACTTTTATT |
| Cyanothece sp. ATCC 51142 | cce_2632 | -20 | 4.8 | ATCAATAATAATTTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_1443 | -90 | 4 | ATTAGGAATAATTAGCAAC |
|
Position: -322
Score: 3.3 Sequence: TTTGACATCCACTTTCGGT
Position: -256
Score: 4.3 Sequence: AATGCTTAAGACTTTCAAT
Position: -244
Score: 3 Sequence: TTTCAATTTTATGTTAATT
Position: -238
Score: 3.1 Sequence: TTTTATGTTAATTTTTATG
Position: -235
Score: 3.3 Sequence: TATGTTAATTTTTATGTTC
Position: -232
Score: 3.1 Sequence: GTTAATTTTTATGTTCTTT
Locus tag: slr1055
|
||||
| slr1055 | -322 | 3.3 | TTTGACATCCACTTTCGGT | |
| -256 | 4.3 | AATGCTTAAGACTTTCAAT | ||
| -244 | 3 | TTTCAATTTTATGTTAATT | ||
| -238 | 3.1 | TTTTATGTTAATTTTTATG | ||
| -235 | 3.3 | TATGTTAATTTTTATGTTC | ||
| -232 | 3.1 | GTTAATTTTTATGTTCTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlH | ||||
| Ortholog function: Protoporphyrin IX magnesium chelatase, subunit H | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1018 | -57 | 3.8 | ATAGTTATAAATTTTTAAT |
| Cyanothece sp. ATCC 51142 | cce_4358 | -183 | 2.7 | AATAAATAATTTTTGTAAA |
| -138 | 2.3 | ATTTGTCAATATTTGTAAC | ||
| Cyanothece sp. PCC 8801 | PCC8801_4320 | -186 | 2.3 | ATTTGTCAATATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_12190 | -247 | 2.8 | ATTAAATATTAATTTTTGT |
| Nostoc sp. PCC 7120 | all4365 | -272 | 2.9 | GTTTTTTATTTTTTTCATC |
| -232 | 3 | AATATTAATTTTTCTTTAC | ||
| Trichodesmium erythraeum IMS101 | Tery_3224 | -65 | 3 | GTTTAAAATTTTTTGATAT |
|
Position: -69
Score: 4.4 Sequence: TTTGATATTTATTCTGAAC
Position: -31
Score: 4.5 Sequence: GTTGAGAATTATTTGCAGT
Locus tag: ssr2333
|
||||
| ssr2333 | -69 | 4.4 | TTTGATATTTATTCTGAAC | |
| -31 | 4.5 | GTTGAGAATTATTTGCAGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: Ferrous iron transport protein A | ||||
| Synechocystis sp. PCC 6803 | ssr2333 | -69 | 4.4 | TTTGATATTTATTCTGAAC |
| -31 | 4.5 | GTTGAGAATTATTTGCAGT | ||
| Cyanothece sp. ATCC 51142 | cce_0033 | -298 | 3.3 | ATTAAAAAATACTGTTAAC |
| -47 | 4.5 | GATAAGAATTATTCTTAAT | ||
| Trichodesmium erythraeum IMS101 | Tery_2879 | -270 | 3.5 | TTTTCCAAATTTTTTCAGT |
|
Position: 10
Score: 3.1 Sequence: ATTGCCAAAGGGGGTCAGT
Locus tag: slr1392
|
||||
| slr1392 | 10 | 3.1 | ATTGCCAAAGGGGGTCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoB | ||||
| Ortholog function: Ferrous iron transport protein B | ||||
| Synechocystis sp. PCC 6803 | slr1392 | -278 | 4.5 | GTTGAGAATTATTTGCAGT |
| Cyanothece sp. ATCC 51142 | cce_0032 | -298 | 3.3 | ATTAAAAAATACTGTTAAC |
| -47 | 4.5 | GATAAGAATTATTCTTAAT | ||
| Trichodesmium erythraeum IMS101 | Tery_2878 | -43 | 3 | TATTACATAATTTTTATAT |
|
Position: -59
Score: 4.2 Sequence: GTTGTTAAAATTTAACAAT
Position: -52
Score: 3.6 Sequence: AAATTTAACAATTCGCAAT
Position: -42
Score: 2.9 Sequence: ATTCGCAATAAATTTTAAC
Position: -39
Score: 3.1 Sequence: CGCAATAAATTTTAACAAT
Position: -32
Score: 2.9 Sequence: AATTTTAACAATTATCCCA
Locus tag: sll1911
|
||||
| sll1911 | -59 | 4.2 | GTTGTTAAAATTTAACAAT | |
| -52 | 3.6 | AAATTTAACAATTCGCAAT | ||
| -42 | 2.9 | ATTCGCAATAAATTTTAAC | ||
| -39 | 3.1 | CGCAATAAATTTTAACAAT | ||
| -32 | 2.9 | AATTTTAACAATTATCCCA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A0913 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0913 | -146 | 2.2 | TTTTTACAACATTTTTAAA |
| -68 | 3.8 | AATGAGAAAATTTTGATAT | ||
| Synechocystis sp. PCC 6803 | sll1911 | -59 | 4.2 | GTTGTTAAAATTTAACAAT |
| Cyanothece sp. ATCC 51142 | cce_0019 | -75 | 3.1 | TTTTTTAATATTTTTTGAT |
| Cyanothece sp. PCC 8801 | PCC8801_2812 | -67 | 4.4 | TATGATAAAATTTATTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4773 | -64 | 2.4 | TTTATGAAATATTTATGAT |
|
Position: -227
Score: 2.9 Sequence: ATTAGCAACAGAAAACATT
Position: -174
Score: 3.2 Sequence: GAAGACAATGATTGCCATA
Position: -158
Score: 3.9 Sequence: ATAGAACAAATTTATCATA
Position: 17
Score: 3.3 Sequence: TGTCATAACCCTTCTCATC
Locus tag: slr1136
|
||||
| slr1136 | -227 | 2.9 | ATTAGCAACAGAAAACATT | |
| -174 | 3.2 | GAAGACAATGATTGCCATA | ||
| -158 | 3.9 | ATAGAACAAATTTATCATA | ||
| 17 | 3.3 | TGTCATAACCCTTCTCATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coxB | ||||
| Ortholog function: Cytochrome c oxidase, subunit II | ||||
| Cyanothece sp. ATCC 51142 | cce_1977 | -136 | 3.7 | AATTTCAATCAATTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0567 | -152 | 2.7 | TTTGTTTATTATTTGTTAC |
| Microcystis aeruginosa NIES-843 | MAE_22930 | -216 | 2.5 | TTTTAGATATTCTTTAGAT |
| Nostoc sp. PCC 7120 | alr0950 | -134 | 3.7 | TTTACTCAAGATTATTAAT |
|
Position: -326
Score: 3.7 Sequence: ATTGCTATCAGTTGTAAGT
Position: -206
Score: 3 Sequence: ATTTTTAATTATTGTTACG
Position: -114
Score: 3 Sequence: GTTTAACATCGTTATTATG
Locus tag: slr1834
|
||||
| slr1834 | -326 | 3.7 | ATTGCTATCAGTTGTAAGT | |
| -206 | 3 | ATTTTTAATTATTGTTACG | ||
| -114 | 3 | GTTTAACATCGTTATTATG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psaA | ||||
| Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1 | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1961 | -206 | 3.4 | AGTTTTAAATATTGTTAAT |
| Cyanothece sp. ATCC 51142 | cce_0989 | -205 | 3.4 | AATTTTAATTATTGTTAAG |
| Microcystis aeruginosa NIES-843 | MAE_47560 | -297 | 3.2 | ATTAATAAACTTTTGTAAA |
| Nostoc sp. PCC 7120 | alr5154 | -177 | 3.4 | ATTTTGAATTATTGTTAAA |
| Trichodesmium erythraeum IMS101 | Tery_4669 | -80 | 4 | ATTGATAATTCTTTACAAC |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2049 | -296 | 3.3 | TCTTTGAATTATTGTTAAT |
| Gloeobacter violaceus PCC 7421 | gvip470 | -195 | 2.2 | TTTTTAAAAATTGTTAAGT |
|
Position: -204
Score: 3 Sequence: AAGCTTAAAAATTAATATT
Position: -201
Score: 3.7 Sequence: CTTAAAAATTAATATTTTT
Position: -198
Score: 3 Sequence: AAAAATTAATATTTTTTTT
Position: -195
Score: 3.3 Sequence: AATTAATATTTTTTTTATA
Position: -194
Score: 3 Sequence: ATTAATATTTTTTTTATAA
Position: -192
Score: 3.1 Sequence: TAATATTTTTTTTATAATT
Position: -189
Score: 3.1 Sequence: TATTTTTTTTATAATTATT
Position: -185
Score: 2.9 Sequence: TTTTTTATAATTATTCTAT
Position: -183
Score: 3.7 Sequence: TTTTATAATTATTCTATCT
Position: -154
Score: 2.9 Sequence: CTAGAAAATGTTAAGCTAG
Position: -118
Score: 4.5 Sequence: AGTGCGGATCATTATCATT
Locus tag: slr1738
|
||||
| slr1738 | -204 | 3 | AAGCTTAAAAATTAATATT | |
| -201 | 3.7 | CTTAAAAATTAATATTTTT | ||
| -198 | 3 | AAAAATTAATATTTTTTTT | ||
| -195 | 3.3 | AATTAATATTTTTTTTATA | ||
| -194 | 3 | ATTAATATTTTTTTTATAA | ||
| -192 | 3.1 | TAATATTTTTTTTATAATT | ||
| -189 | 3.1 | TATTTTTTTTATAATTATT | ||
| -185 | 2.9 | TTTTTTATAATTATTCTAT | ||
| -183 | 3.7 | TTTTATAATTATTCTATCT | ||
| -154 | 2.9 | CTAGAAAATGTTAAGCTAG | ||
| -118 | 4.5 | AGTGCGGATCATTATCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: perR | ||||
| Ortholog function: Predicted peroxide stress response regulator, Fur family | ||||
| Synechocystis sp. PCC 6803 | slr1738 | -194 | 3 | ATTAATATTTTTTTTATAA |
| Cyanothece sp. PCC 7425 | Cyan7425_1597 | -88 | 4.9 | TTTGAGAATTATACTAAAT |
|
Position: -298
Score: 3.3 Sequence: AATGTAAAATATTTGCTAA
Position: -297
Score: 3.2 Sequence: ATGTAAAATATTTGCTAAT
Position: -287
Score: 3 Sequence: TTTGCTAATAATATGTAGA
Position: -189
Score: 3.3 Sequence: CAGGAGAACAAATATTGTT
Locus tag: sll0849
|
||||
| sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA | |
| -297 | 3.2 | ATGTAAAATATTTGCTAAT | ||
| -287 | 3 | TTTGCTAATAATATGTAGA | ||
| -189 | 3.3 | CAGGAGAACAAATATTGTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -248
Score: 3.4 Sequence: ATTGCTATTCATCTTTAAA
Position: -236
Score: 3 Sequence: CTTTAAAACTGTTTTAAAA
Position: -20
Score: 3.8 Sequence: TTTGTTAATCAAAACCATT
Locus tag: sll1592
|
||||
| sll1592 | -248 | 3.4 | ATTGCTATTCATCTTTAAA | |
| -236 | 3 | CTTTAAAACTGTTTTAAAA | ||
| -20 | 3.8 | TTTGTTAATCAAAACCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_G0062 | ||||
| Ortholog function: Two-component response regulator, LuxR family | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0062 | -62 | 4.1 | ATTGATAAATAATTTAAGT |
| Cyanothece sp. ATCC 51142 | cce_3895 | 16 | 2.8 | GTTTAAAAATTCTTTTAGT |
| Cyanothece sp. PCC 8801 | PCC8801_1927 | -184 | 2 | AATATTTTATATTTATAGT |
| Nostoc sp. PCC 7120 | alr3156 | -98 | 4.1 | ATTACGAATTAATATAAAT |
|
Position: -282
Score: 3 Sequence: ATGGGAAAAAAATCAAATT
Position: -254
Score: 3.1 Sequence: ATTTATCCATATCATCAGT
Position: -149
Score: 3.5 Sequence: ATTAAAGTTGTTTAGCTTT
Position: -100
Score: 3.5 Sequence: AACGAATAGATCTATCTTT
Position: -36
Score: 3.1 Sequence: AAAGCCATTTCTGTTCAAT
Position: 26
Score: 3 Sequence: GTTGTTGGCAATTCTTTTT
Locus tag: sll1590
|
||||
| sll1590 | -282 | 3 | ATGGGAAAAAAATCAAATT | |
| -254 | 3.1 | ATTTATCCATATCATCAGT | ||
| -149 | 3.5 | ATTAAAGTTGTTTAGCTTT | ||
| -100 | 3.5 | AACGAATAGATCTATCTTT | ||
| -36 | 3.1 | AAAGCCATTTCTGTTCAAT | ||
| 26 | 3 | GTTGTTGGCAATTCTTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_G0061 | ||||
| Ortholog function: Two-component sensor histidine kinase | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_G0061 | -62 | 4.1 | ATTGATAAATAATTTAAGT |
| Cyanothece sp. PCC 8801 | PCC8801_1928 | -184 | 2 | AATATTTTATATTTATAGT |
| Nostoc sp. PCC 7120 | alr3155 | -98 | 4.1 | ATTACGAATTAATATAAAT |
|
Position: -278
Score: 3 Sequence: CTGCTTAACATTTCTTAAT
Position: -275
Score: 3.1 Sequence: CTTAACATTTCTTAATAAT
Position: -268
Score: 3.2 Sequence: TTTCTTAATAATTTTAGTT
Position: -259
Score: 3.1 Sequence: AATTTTAGTTGCTATAAAT
Position: -252
Score: 5 Sequence: GTTGCTATAAATTCTCATT
Position: -207
Score: 4.4 Sequence: AGTGCTAAAGATTCTCAAC
Position: -161
Score: 2.9 Sequence: CTAGGGAAAGATTGGCGAT
Position: -46
Score: 4.6 Sequence: ATTGCCATAATTTATTATT
Locus tag: sll0247
|
||||
| sll0247 | -278 | 3 | CTGCTTAACATTTCTTAAT | |
| -275 | 3.1 | CTTAACATTTCTTAATAAT | ||
| -268 | 3.2 | TTTCTTAATAATTTTAGTT | ||
| -259 | 3.1 | AATTTTAGTTGCTATAAAT | ||
| -252 | 5 | GTTGCTATAAATTCTCATT | ||
| -207 | 4.4 | AGTGCTAAAGATTCTCAAC | ||
| -161 | 2.9 | CTAGGGAAAGATTGGCGAT | ||
| -46 | 4.6 | ATTGCCATAATTTATTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: isiA | ||||
| Ortholog function: Photosystem II chlorophyll-binding protein | ||||
| Synechocystis sp. PCC 6803 | sll0247 | -269 | 2.8 | ATTTCTTAATAATTTTAGT |
| Cyanothece sp. ATCC 51142 | cce_1785 | -18 | 4.4 | ATTGCAAATCTTTTTAAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_2434 | -61 | 4.7 | ATTGAGTTTATTTCTCAAC |
| Nostoc sp. PCC 7120 | all4001 | -161 | 4.8 | ATTAAGAATCTTTTTCAAT |
| Trichodesmium erythraeum IMS101 | Tery_1667 | -156 | 3.2 | TTTTATAATTTCTTTTAAA |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1542 | -45 | 5.2 | ATTGAGAATTATTGTAAAT |
| Thermosynechococcus elongatus BP-1 | null | -121 | 5.5 | AATGCTATTAATTCTCAAT |
|
Position: -92
Score: 3 Sequence: ACTGCCATTTTTTGTCCAG
Position: -17
Score: 3.6 Sequence: CTTTCTTTTGATTCTCTAT
Locus tag: sll1899
|
||||
| sll1899 | -92 | 3 | ACTGCCATTTTTTGTCCAG | |
| -17 | 3.6 | CTTTCTTTTGATTCTCTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaB | ||||
| Ortholog function: Protoheme IX farnesyltransferase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0255 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22910 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1781 | -41 | 4.1 | AATTATAACCAGTTTCAAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2600 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1339 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -209
Score: 3 Sequence: AATAACTTCAAATTTAATT
Position: -130
Score: 3.2 Sequence: AATACCAAATTTTCCCGAT
Locus tag: sll1898
|
||||
| sll1898 | -209 | 3 | AATAACTTCAAATTTAATT | |
| -130 | 3.2 | AATACCAAATTTTCCCGAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ctaA | ||||
| Ortholog function: Heme A synthase | ||||
| Cyanothece sp. PCC 8801 | PCC8801_0256 | -185 | 2.2 | TTTTATTAACTTATGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_22920 | -282 | 2.5 | TCTTTTCAATATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_1780 | -278 | 3.5 | ATTGTTAAAATTATGAAAT |
| -167 | 3.3 | ATTAAAAAAAAATTTAAAA | ||
| Synechococcus elongatus PCC 7942 | Synpcc7942_2601 | -158 | 4.3 | GATGACAATATTTTTCGAT |
| Prochlorococcus marinus str. MIT 9313 | PMT1340 | -30 | 2.6 | ATTTAAATTATTTTATTGT |
|
Position: -130
Score: 4.9 Sequence: CTTGCAAATAATTCTTATT
Locus tag: sll1878
|
||||
| sll1878 | -130 | 4.9 | CTTGCAAATAATTCTTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: afuC | ||||
| Ortholog function: Predicted Fe(3+) ABC transport system, ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A0871 | -83 | 5.1 | GTTGAGAATAGTTCTTAAT |
| Cyanothece sp. ATCC 51142 | cce_3801 | -163 | 4.2 | ATTGAAAATTAATGCTAAT |
| Cyanothece sp. PCC 7425 | Cyan7425_3510 | -105 | 5.3 | ATTGAGAATAATTTTCAAA |
| -60 | 4 | GTTGAATAATAGTCTTAAT | ||
| Microcystis aeruginosa NIES-843 | MAE_12460 | -117 | 4.4 | TTTGAGAAAGTTTCCTAAT |
| Trichodesmium erythraeum IMS101 | Tery_3222 | -94 | 5.1 | AATGAAAAAAATATTCAAT |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1406 | -81 | 4.2 | ATTGAGAATAAATCGCAGA |
| Synechococcus sp. JA-3-3Ab | CYA_2794 | -26 | 3.8 | AGTGAAAATCTTTTGCAAC |
| Gloeobacter violaceus PCC 7421 | gll1012 | -64 | 3.7 | ATTGACAATTAATTGCAGC |
|
Position: -124
Score: 3.4 Sequence: ATTTACAAATTGTTACAAT
Position: -1
Score: 3.9 Sequence: AATGACAACGACTCTCCAA
Locus tag: sll1867
|
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| sll1867 | -124 | 3.4 | ATTTACAAATTGTTACAAT | |
| -1 | 3.9 | AATGACAACGACTCTCCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbA | ||||
| Ortholog function: photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll1867 | -124 | 3.4 | ATTTACAAATTGTTACAAT |
|
Position: -187
Score: 4.1 Sequence: ATTGCACTTTATTTGCAAT
Locus tag: slr0513
|
||||
| slr0513 | -187 | 4.1 | ATTGCACTTTATTTGCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: Fe ABC transport system, substrate-binding protein | ||||
| Synechocystis sp. PCC 6803 | slr0513 | -240 | 3.9 | AATAATAATCTCTTGCAAT |
| -187 | 4.1 | ATTGCACTTTATTTGCAAT | ||
|
Position: -334
Score: 3.4 Sequence: AATAAGAAAGTGTTCCATT
Position: -163
Score: 2.9 Sequence: CTTGACGTTGTTTAATTTT
Position: -153
Score: 3.4 Sequence: TTTAATTTTTCTTGGCATT
Position: -138
Score: 3.1 Sequence: CATTAGTGTTATTTTCAAC
Position: -18
Score: 3.1 Sequence: TTTGAGGACGATTCGTTTA
Position: -1
Score: 3.1 Sequence: TATGAGTTTACCTACCTAT
Locus tag: sll0741
|
||||
| sll0741 | -334 | 3.4 | AATAAGAAAGTGTTCCATT | |
| -163 | 2.9 | CTTGACGTTGTTTAATTTT | ||
| -153 | 3.4 | TTTAATTTTTCTTGGCATT | ||
| -138 | 3.1 | CATTAGTGTTATTTTCAAC | ||
| -18 | 3.1 | TTTGAGGACGATTCGTTTA | ||
| -1 | 3.1 | TATGAGTTTACCTACCTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifJ | ||||
| Ortholog function: Pyruvate-flavodoxin oxidoreductase | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1443 | -165 | 2.2 | TTTTCTTATAACTTTTAGC |
| Cyanothece sp. PCC 8801 | PCC8801_3918 | -67 | 3.4 | TTTGTCAATAATTTGTAAC |
| Microcystis aeruginosa NIES-843 | MAE_38140 | -292 | 3.9 | ATTCTGAATATTAATTAAT |
| Nostoc sp. PCC 7120 | alr2803 | -92 | 3.8 | ATTTTTAATCAGTATTAAT |
|
Position: -64
Score: 3.8 Sequence: TGGGAGAATGATTTTAATT
Position: -58
Score: 3.6 Sequence: AATGATTTTAATTGTTTAA
Position: 14
Score: 3.2 Sequence: CTGGGAAAACTTTCTCAAA
Locus tag: sll0497
|
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| sll0497 | -64 | 3.8 | TGGGAGAATGATTTTAATT | |
| -58 | 3.6 | AATGATTTTAATTGTTTAA | ||
| 14 | 3.2 | CTGGGAAAACTTTCTCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SYNPCC7002_A2351 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2351 | -216 | 2.9 | TTTATTATTGTTTTTTAGT |
| Cyanothece sp. ATCC 51142 | cce_3809 | -132 | 3.2 | GTTTTTATTTTCTGTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_2575 | -247 | 3.1 | ATTTCTCCTTATTTTTAAT |
| Trichodesmium erythraeum IMS101 | Tery_2644 | -122 | 4.2 | AATTAGATTAATTTTGAAT |
|
Position: -139
Score: 3.7 Sequence: CTTTACAATGGATAACATT
Position: -132
Score: 3.2 Sequence: ATGGATAACATTAAGAAAA
Position: -123
Score: 4.2 Sequence: ATTAAGAAAAATTAAGATT
Position: -105
Score: 3.2 Sequence: TTCCCGGTTCTTTCTCATT
Position: -32
Score: 3 Sequence: CTTCGTAATTATTATTTTG
Locus tag: slr0927
|
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| slr0927 | -139 | 3.7 | CTTTACAATGGATAACATT | |
| -132 | 3.2 | ATGGATAACATTAAGAAAA | ||
| -123 | 4.2 | ATTAAGAAAAATTAAGATT | ||
| -105 | 3.2 | TTCCCGGTTCTTTCTCATT | ||
| -32 | 3 | CTTCGTAATTATTATTTTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbD | ||||
| Ortholog function: Photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | sll0849 | -298 | 3.3 | AATGTAAAATATTTGCTAA |
| Cyanothece sp. ATCC 51142 | cce_0660 | -298 | 3.4 | ATTGTAAATTTTTTGCTAA |
| Cyanothece sp. PCC 7425 | Cyan7425_5031 | -91 | 3.1 | GTTTATAAACTTTCGTAAA |
| Microcystis aeruginosa NIES-843 | MAE_41160 | -274 | 2.9 | ATTTGTAATTTTTTGCTAA |
| Synechococcus sp. JA-3-3Ab | CYA_2647 | -106 | 3 | TTTATTAATTTTTCGTAAG |
|
Position: -247
Score: 4.3 Sequence: TTTTAGTACAACTCTCATT
Position: -173
Score: 3.3 Sequence: ATTTTATTTTTGTCTCAAT
Position: -141
Score: 3 Sequence: AAACACAAAATTTGTTTTT
Position: -88
Score: 3.2 Sequence: AATTAAAACGAATTTAAGT
Locus tag: slr0749
|
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| slr0749 | -247 | 4.3 | TTTTAGTACAACTCTCATT | |
| -173 | 3.3 | ATTTTATTTTTGTCTCAAT | ||
| -141 | 3 | AAACACAAAATTTGTTTTT | ||
| -88 | 3.2 | AATTAAAACGAATTTAAGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlL | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2347 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Synechocystis sp. PCC 6803 | slr0749 | -173 | 3.3 | ATTTTATTTTTGTCTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0791 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16230 | -150 | 2.8 | ATTTATATAATTTTTAAGC |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -317
Score: 3.1 Sequence: ATCGCCAAATTTTAGGCTT
Position: -261
Score: 3.3 Sequence: GTTGACTTTTATTGTCCAC
Position: -251
Score: 3.4 Sequence: ATTGTCCACAATTAAAATT
Position: -248
Score: 3.2 Sequence: GTCCACAATTAAAATTAAT
Position: -153
Score: 2.9 Sequence: GTTCATTATGTTTTACGAT
Position: -117
Score: 3 Sequence: ATTGATAATTTACCAAAAG
Position: -96
Score: 3.4 Sequence: TTAGAAAAAATTACTCAGA
Locus tag: slr0750
|
||||
| slr0750 | -317 | 3.1 | ATCGCCAAATTTTAGGCTT | |
| -261 | 3.3 | GTTGACTTTTATTGTCCAC | ||
| -251 | 3.4 | ATTGTCCACAATTAAAATT | ||
| -248 | 3.2 | GTCCACAATTAAAATTAAT | ||
| -153 | 2.9 | GTTCATTATGTTTTACGAT | ||
| -117 | 3 | ATTGATAATTTACCAAAAG | ||
| -96 | 3.4 | TTAGAAAAAATTACTCAGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chlN | ||||
| Ortholog function: Light-independent protochlorophyllide reductase, subunit N | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A2345 | -126 | 3.6 | TTTTATAAAAACTCTAAGT |
| Cyanothece sp. ATCC 51142 | cce_4534 | -118 | 3.7 | TTTGAGTTTTATTTAAAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0789 | -242 | 2.7 | ATTTAGTAAATTTTAAAGT |
| Microcystis aeruginosa NIES-843 | MAE_16250 | -107 | 2.8 | ATTAAGTAATTCTTTATAT |
| Thermosynechococcus elongatus BP-1 | null | -211 | 2.8 | TTTTGTATTTTTGTTTAAT |
|
Position: -283
Score: 4.4 Sequence: TACGAGAAAAATTTTTATT
Position: -182
Score: 4 Sequence: TTAAAGAAATATTATTAAT
Position: -140
Score: 4 Sequence: AATGCCAATAATTATCTCG
Locus tag: slr1181
|
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| slr1181 | -283 | 4.4 | TACGAGAAAAATTTTTATT | |
| -182 | 4 | TTAAAGAAATATTATTAAT | ||
| -140 | 4 | AATGCCAATAATTATCTCG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: psbA | ||||
| Ortholog function: photosystem II, reaction center protein | ||||
| Synechocystis sp. PCC 6803 | slr1181 | -242 | 2.8 | ATTAAAATCTTTTTTTTAC |
| -182 | 4 | TTAAAGAAATATTATTAAT | ||
|
Position: -102
Score: 3.6 Sequence: TCTAGGATCTATTCTCAAT
Locus tag: sll0567
|
||||
| sll0567 | -102 | 3.6 | TCTAGGATCTATTCTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fur | ||||
| Ortholog function: Ferric uptake regulator, Fur family | ||||
| Synechococcus sp. PCC 7002 | SYNPCC7002_A1649 | -88 | 3.5 | GTTAGTATTTATTTGCAAT |
| Cyanothece sp. ATCC 51142 | cce_2330 | -96 | 5.1 | GTTGCTAATTATTTTCAAT |
| Cyanothece sp. PCC 8801 | PCC8801_0870 | -97 | 4.6 | GTTGCAAATTATTTGCAAT |
| Trichodesmium erythraeum IMS101 | Tery_1958 | -44 | 4.7 | ATTGTGTATCATTGTCAAT |
| Thermosynechococcus elongatus BP-1 | null | -59 | 4.4 | CATTGTAATTATTCTCAAT |