Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fnr regulog to Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis

Reference regulog properties
Source regulog: Fnr - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Orthologous TF(s) No orthologous TFs found
Regulated genes 22
Built upon 685 sites [see more]
Predicted regulatory interactions in Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Locus tag Position Score Sequence
Position: -108
Score: 3.7
Sequence: TTAATTTATAAAAA
Position: -104
Score: 3.8
Sequence: TTTATAAAAATTAA
Position: -80
Score: 4.1
Sequence: TTGATAATTATAAA
Locus tag: WGLp002
WGLp002 -108 3.7 TTAATTTATAAAAA
-104 3.8 TTTATAAAAATTAA
-80 4.1 TTGATAATTATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpB
Ortholog function: ATP synthase A chain (EC 3.6.3.14)
Citrobacter koseri ATCC BAA-895 CKO_00078 -122 4.2 TTGTTTGAAATCAC
Enterobacter sp. 638 Ent638_4126 -292 3.7 TTGATTAATATGAC
Erwinia amylovora ATCC 49946 EAM_3480 -124 3.9 TCGATTGAAATCAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4518 -191 3.7 ATGATTGTTAGCAA
Escherichia coli str. K-12 substr. MG1655 b3738 -123 4.2 TTGTTTGAAATCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04143 -122 4.2 TTGTTTGAAATCAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0046 -225 3.9 ATTATTAAAAACAA
Proteus mirabilis HI4320 PMI3058 -130 4
Salmonella typhimurium LT2 STM3871 -122 4.2 TTGTTTGAAATCAC
Position: -255
Score: 3.8
Sequence: TAGAATTAGATCAA
Position: -191
Score: 3.3
Sequence: TTGTTTAAAATTTA
Position: -160
Score: 3.6
Sequence: TTGGTAAAAATAAA
Position: -100
Score: 3.2
Sequence: TTTATTTATATTTA
Position: -85
Score: 4.2
Sequence: ATTTTTTAAATCAA
Locus tag: WGLp127
WGLp127 -255 3.8 TAGAATTAGATCAA
-191 3.3 TTGTTTAAAATTTA
-160 3.6 TTGGTAAAAATAAA
-100 3.2 TTTATTTATATTTA
-85 4.2 ATTTTTTAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ubiA
Ortholog function: 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)
Erwinia amylovora ATCC 49946 EAM_0261 -194 3.8 CTGATATTAGTCAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0627 -230 3.3 GTGACTAGGGTCAA
Escherichia coli str. K-12 substr. MG1655 b4040 -70 3.4 TTGCTTTACATCTC
Photorhabdus luminescens subsp. laumondii TTO1 plu4377 -253 3.8 TTATTTTTGGTCAA
Proteus mirabilis HI4320 PMI2752 -163 4.3 TTGTTTTTTCTCAA
Serratia proteamaculans 568 Spro_4463 -223 3.6 TTGCTGGAGATCAC
Yersinia pestis KIM y0569 -253 3.3 CTGATATTTATAAT
Position: -233
Score: 3.7
Sequence: ATTTTATTTATCAA
Position: -82
Score: 3.7
Sequence: TTGTTCCAAAAAAA
Position: -26
Score: 4
Sequence: ATGAACTTTATCAA
Locus tag: WGLp147
WGLp147 -233 3.7 ATTTTATTTATCAA
-82 3.7 TTGTTCCAAAAAAA
-26 4 ATGAACTTTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoA
Ortholog function: Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Citrobacter koseri ATCC BAA-895 CKO_02729 -267 3.7 TTGTTGATAATTAA
Position: -53
Score: 3.5
Sequence: TTTTTTAAAAACAT
Position: -21
Score: 3.4
Sequence: TTTACAAAGGACAA
Locus tag: WGLp148
WGLp148 -53 3.5 TTTTTTAAAAACAT
-21 3.4 TTTACAAAGGACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoB
Ortholog function: Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Citrobacter koseri ATCC BAA-895 CKO_02730 -267 3.7 TTGTTGATAATTAA
Erwinia amylovora ATCC 49946 EAM_0984 -207 3.7 GTTATTTAAATCAG
Escherichia coli str. K-12 substr. MG1655 b0431 -241 3.7 TTGTTTTATTTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00393 -49 3.7 TTGAGGTCGTTCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3876 -336 3.8 TTGTGAGCTATCAA
Proteus mirabilis HI4320 PMI0107 9 3.6 ATGAAATACATAAA
Salmonella typhimurium LT2 STM0442 -268 3.4 TTTATTGATAATAA
Serratia proteamaculans 568 Spro_1089 -293 3.6 TTCTTTTACATTAA
Yersinia pestis KIM y1020 -223 3.5 TTGTTTTTCCTTAA
Position: 37
Score: 3.4
Sequence: TTCATAATAATGAA
Locus tag: WGLp149
WGLp149 37 3.4 TTCATAATAATGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoC
Ortholog function: Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Citrobacter koseri ATCC BAA-895 CKO_02731 -267 3.7 TTGTTGATAATTAA
Erwinia amylovora ATCC 49946 EAM_0983 -207 3.7 GTTATTTAAATCAG
Escherichia coli str. K-12 substr. MG1655 b0430 -241 3.7 TTGTTTTATTTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00392 -49 3.7 TTGAGGTCGTTCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3877 -336 3.8 TTGTGAGCTATCAA
Proteus mirabilis HI4320 PMI0106 9 3.6 ATGAAATACATAAA
Salmonella typhimurium LT2 STM0441 -268 3.4 TTTATTGATAATAA
Serratia proteamaculans 568 Spro_1088 -293 3.6 TTCTTTTACATTAA
Yersinia pestis KIM y1019 -223 3.5 TTGTTTTTCCTTAA
Position: -26
Score: 3.9
Sequence: TTAATTAAAATAAA
Position: -3
Score: 3.5
Sequence: TTTATGATAATAAA
Locus tag: WGLp151
WGLp151 -26 3.9 TTAATTAAAATAAA
-3 3.5 TTTATGATAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoE
Ortholog function: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Citrobacter koseri ATCC BAA-895 CKO_02733 -267 3.7 TTGTTGATAATTAA
Erwinia amylovora ATCC 49946 EAM_0981 -207 3.7 GTTATTTAAATCAG
Escherichia coli str. K-12 substr. MG1655 b0428 -241 3.7 TTGTTTTATTTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00390 -49 3.7 TTGAGGTCGTTCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3879 -336 3.8 TTGTGAGCTATCAA
Proteus mirabilis HI4320 PMI0105 9 3.6 ATGAAATACATAAA
Salmonella typhimurium LT2 STM0439 -268 3.4 TTTATTGATAATAA
Serratia proteamaculans 568 Spro_1086 -293 3.6 TTCTTTTACATTAA
Position: -101
Score: 4.1
Sequence: TTTATATAAATAAA
Locus tag: WGLp323
WGLp323 -101 4.1 TTTATATAAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Citrobacter koseri ATCC BAA-895 CKO_03259 -133 4.6 ATGTTGTAAATCAA
Edwardsiella tarda EIB202 ETAE_0659 -165 4.5 TTGATTGTTAACAA
-139 5 ATGATTTACATCAA
Enterobacter sp. 638 Ent638_0660 -116 4.7 CTGATTTCAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -116 4.2 GTGATTTAGCTCAA
Escherichia coli str. K-12 substr. MG1655 b0114 -131 4.6 ATGTTGTAAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -114 4.7 CTGATTTCAATCAA
Proteus mirabilis HI4320 PMI2046 -245 4 ATGTGTTTAATCAA
-134 4.2 ATGATTTCGCTCAA
Salmonella typhimurium LT2 STM0152 -116 4.7 CTGATTTCAATCAA
Serratia proteamaculans 568 Spro_4011 -117 4.6 CTGATTTCGATCAA
Yersinia pestis KIM y0767 -135 4.4 ATGATTTCGGTCAA
Position: -332
Score: 3.7
Sequence: TTTTTATATATAAA
Position: -330
Score: 3.7
Sequence: TTTATATATAAAAA
Position: -175
Score: 3.9
Sequence: TTTATAAAAATAAA
Locus tag: WGLp395
WGLp395 -332 3.7 TTTTTATATATAAA
-330 3.7 TTTATATATAAAAA
-175 3.9 TTTATAAAAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aspA
Ortholog function: Aspartate ammonia-lyase (EC 4.3.1.1)
Edwardsiella tarda EIB202 ETAE_0311 19 3.5 TTGAAGAAGATCTA
Enterobacter sp. 638 Ent638_0326 -184 3.6 TTAATAATTATCAT
Erwinia amylovora ATCC 49946 EAM_0416 -194 4 TTGATATAACACGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0621 -288 4 TTGTTCTAAAATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04529 0 3.5 ATGTTAAACAACAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4137 -362 4.2 TTGATTTGGATGAA
-198 3.8 ATCACATATATCAA
Proteus mirabilis HI4320 PMI2546 -202 3.7 ATGAGATAGATCAC
Position: 31
Score: 3.6
Sequence: TTGGTATATATGAA
Locus tag: WGLp422
WGLp422 31 3.6 TTGGTATATATGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhD
Ortholog function: Succinate dehydrogenase hydrophobic membrane anchor protein
Citrobacter koseri ATCC BAA-895 CKO_02437 25 3.6 ATGTGAAAAAACAA
Edwardsiella tarda EIB202 ETAE_2587 10 4
Escherichia coli str. K-12 substr. MG1655 b0722 10 3.6 ATGTGAAAAAACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00729 -104 3.6 ATGTGAAAAAACAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1427 -127 4 TTGTGAAAAAACAA
Proteus mirabilis HI4320 PMI0566 -2 4 TTGTGAAAAAACAA
Salmonella typhimurium LT2 STM0733 10 3.6 ATGTGAAAAAACAA
Serratia proteamaculans 568 Spro_1264 -249 4.1 GTGATCTAAATCAC
Yersinia pestis KIM y3070 -224 3.8 ATGTTATCAATCAG
Position: 0
Score: 4
Sequence: ATGATATTTTTCAA
Position: 9
Score: 3.5
Sequence: TTCAAAAAAAACAA
Locus tag: WGLp423
WGLp423 0 4 ATGATATTTTTCAA
9 3.5 TTCAAAAAAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Citrobacter koseri ATCC BAA-895 CKO_02438 25 3.6 ATGTGAAAAAACAA
Edwardsiella tarda EIB202 ETAE_2588 10 4
Escherichia coli str. K-12 substr. MG1655 b0721 10 3.6 ATGTGAAAAAACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00728 -104 3.6 ATGTGAAAAAACAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1426 -127 4 TTGTGAAAAAACAA
Proteus mirabilis HI4320 PMI0565 -2 4 TTGTGAAAAAACAA
Salmonella typhimurium LT2 STM0732 10 3.6 ATGTGAAAAAACAA
Serratia proteamaculans 568 Spro_1263 -249 4.1 GTGATCTAAATCAC
Yersinia pestis KIM y3071 -224 3.8 ATGTTATCAATCAG
Position: -44
Score: 3.5
Sequence: TTCATTATAAACAT
Locus tag: WGLp595
WGLp595 -44 3.5 TTCATTATAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1)
Enterobacter sp. 638 Ent638_4063 -132 3.6 ATGATACAAAAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -143 3.5 ATGAAGTAAAGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -146 4.2 TTGTTCTACATCAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -346 3.6 TTATGTCAAATCAA
Proteus mirabilis HI4320 PMI3036 -164 3.8 TTTATTTAAAATAA
-85 4 ATGATTTTCATTAA
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