Propagation of NsrR regulog to Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601
| Source regulog: | NsrR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 |
| Orthologous TF(s) | SSPA3883 |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -47
Score: 5.8 Sequence: GATGCATTTGATATACATC
Locus tag: SSPA0292
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| SSPA0292 | -47 | 5.8 | GATGCATTTGATATACATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmp | ||||
| Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2552 | -47 | 5.7 | GATGCATTTGAGATACATC |
| Salmonella typhimurium LT2 | STM2556 | -79 | 4.8 | GATCCATTTACAATGCAAG |
| -47 | 5.8 | GATGCATTTGATATACATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00235 | -47 | 5.5 | GATGTATTTGACATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02877 | -47 | 6.3 | GATGCATTTAAAATGCATC |
| Enterobacter sp. 638 | Ent638_3037 | -47 | 6.2 | GATGCATATAAAATACATC |
| Yersinia pestis KIM | y1321 | -58 | 6.1 | GATGCATTTAAAATACATG |
| Serratia proteamaculans 568 | Spro_3639 | -59 | 6 | GATGCATTTAAAATGCATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3251 | -51 | 5.9 | GATTCATATAAAATACAAC |
| Edwardsiella tarda EIB202 | ETAE_2822 | -45 | 6.2 | GTTGCATTTAAAATACAAC |
| Proteus mirabilis HI4320 | PMI1868 | -61 | 5.4 | GTTGTATTAAAAATACATG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3292 | -64 | 5.4 | GTTGCATTTAAATTACATG |
|
Position: -48
Score: 5.5 Sequence: GGTGTATATTAAATACATC
Locus tag: SSPA0994
|
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| SSPA0994 | -48 | 5.5 | GGTGTATATTAAATACATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tehB2 | ||||
| Ortholog function: tellurite resistance-like protein TehB2 | ||||
| Salmonella typhimurium LT2 | STM1808 | -48 | 5.5 | GGTGTATATTAAATACATC |
| Citrobacter koseri ATCC BAA-895 | CKO_01186 | -48 | 5.9 | GATGTATATTAAATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02314 | -43 | 5.6 | GGTGCATATTAAATACATC |
|
Position: -35
Score: 5.4 Sequence: AATGCATTTCAAATATACT
Locus tag: SSPA1169
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| SSPA1169 | -35 | 5.4 | AATGCATTTCAAATATACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tehA | ||||
| Ortholog function: Tellurite resistance protein TehA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1429 | -47 | 5.4 | AATGCATTTCAAATATACT |
| Salmonella typhimurium LT2 | STM1609 | -35 | 5.4 | AATGCATTTCAAATATACT |
| Citrobacter koseri ATCC BAA-895 | CKO_01466 | -35 | 5.6 | AATGCATTTAAAATATACT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01941 | -47 | 5 | GGTTCCTTTAAAATGCAAC |
| Enterobacter sp. 638 | Ent638_1974 | -35 | 5.2 | CTAGCATTTCAAATATAAT |
|
Position: -135
Score: 3.7 Sequence: AAGATATTTTGTATACAAC
Locus tag: SSPA1320
|
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| SSPA1320 | -135 | 3.7 | AAGATATTTTGTATACAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: grxD | ||||
| Ortholog function: Probable monothiol glutaredoxin ydhD | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1654 | -135 | 4.4 | CGAATATTTGAAATGCAAC |
| Salmonella typhimurium LT2 | STM1433 | -208 | 3.7 | GATGTAAAAAAATAGCAAT |
| -135 | 3.7 | AAGATATTTTGTATACAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01665 | -134 | 4.3 | GAGATATTTAGAATGCAAC |
|
Position: -186
Score: 4.3 Sequence: GTTGTATACAAAATATCTT
Locus tag: SSPA1321
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| SSPA1321 | -186 | 4.3 | GTTGTATACAAAATATCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydhO | ||||
| Ortholog function: putative exported protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1655 | -217 | 4.8 | GTTGCATTTCAAATATTCG |
| Salmonella typhimurium LT2 | STM1432 | -185 | 4.3 | GTTGTATACAAAATATCTT |
| Enterobacter sp. 638 | Ent638_1792 | -223 | 3.9 | GTTGCATTCGCAATATAGT |
|
Position: -248
Score: 3.8 Sequence: TAGTCATTTTCTATACATC
Locus tag: SSPA1379
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| SSPA1379 | -248 | 3.8 | TAGTCATTTTCTATACATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: Iron binding protein SufA for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -248 | 4.1 | TAGTCATTTTCAATACAAC |
| Salmonella typhimurium LT2 | STM1369 | -248 | 3.8 | TAGTCATTTTCTATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -116 | 4 | TATGCTTATAAAAAGCACT |
| Enterobacter sp. 638 | Ent638_1760 | -249 | 3.8 | TAGGCATTATCTATACATC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -191 | 3.9 | AATAAATTAAAGATATACC |
|
Position: -89
Score: 3.9 Sequence: ATGGTATTTAAAATACTGT
Locus tag: SSPA1463
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| SSPA1463 | -89 | 3.9 | ATGGTATTTAAAATACTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeaR | ||||
| Ortholog function: uncharacterized protein/domain, possibly involved in tellurite resistance | ||||
| Salmonella typhimurium LT2 | STM1271 | -89 | 3.9 | ATGGTATTTAAAATACTGT |
|
Position: -40
Score: 4.1 Sequence: GATGTAAAATAAATGCGCC
Locus tag: SSPA2532
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| SSPA2532 | -40 | 4.1 | GATGTAAAATAAATGCGCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygbA | ||||
| Ortholog function: hypothetical protein involved in nitrosative stress | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2732 | -38 | 5.1 | GATGTAATATAAATACATC |
| Salmonella typhimurium LT2 | STM2860 | -40 | 4.4 | GGTGTAAAATAAATACACC |
| Enterobacter sp. 638 | Ent638_3209 | -39 | 4.1 | GATGTATTATTTATGCACA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2415 | -39 | 5.6 | ATTGTATTTAAAATGCATC |
| Proteus mirabilis HI4320 | PMI1959 | -215 | 3.7 | ATTGTTTGTTAAATAAAAT |
| -38 | 5.8 | AATGCATTTTAAATGCAAC | ||
|
Position: -47
Score: 6.4 Sequence: GATGCATTTAAAATACAAC
Locus tag: SSPA3917
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| SSPA3917 | -47 | 6.4 | GATGCATTTAAAATACAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dnrN | ||||
| Ortholog function: Nitric oxide-dependent regulator DnrN or NorA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4209 | -47 | 6.4 | GATGCATTTAAAATACATC |
| Salmonella typhimurium LT2 | STM4399 | -47 | 6.4 | GATGCATTTAAAATACAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_03623 | -47 | 6.2 | GATGTATTTAAAATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04602 | -47 | 6.4 | GATGCATTTAAAATACATC |
| Enterobacter sp. 638 | Ent638_0379 | -48 | 5.8 | GATGCATTTAATATGCACC |
| Yersinia pestis KIM | y0652 | -77 | 5.1 | CATGCATTTATTATGCATG |
| -53 | 4.8 | GGTGTATAATAAATACATG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3606 | -50 | 6 | GATGCATTTAAAATGCAAT |
| Edwardsiella tarda EIB202 | ETAE_0372 | -47 | 5.7 | ATTGCATTTAAAATACACC |