Propagation of IscR regulog to Yersinia pestis CA88-4125
| Source regulog: | IscR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | activator (repressor) |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia pestis CA88-4125 |
| Orthologous TF(s) | YPE_0510 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -67
Score: 6.6 Sequence: ATAGTTGACTAAAACACTCAAGAAT
Locus tag: YPE_0510
|
||||
| YPE_0510 | -67 | 6.6 | ATAGTTGACTAAAACACTCAAGAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iscR | ||||
| Ortholog function: Iron-sulfur cluster regulator IscR | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2531 | -133 | 6.7 | ATACCCGACTAAATCAGTCAAGTAA |
| -108 | 5.8 | ATAGTTGACCAATTTACTCGGGAAT | ||
| Salmonella typhimurium LT2 | STM2544 | -132 | 6.5 | ATACCTGACTAATTTACTCAAGTAA |
| -107 | 6.1 | ATAGTTGACCAAATTACTCGGGAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00250 | -132 | 6.8 | ATACCTGACTAAATTAGTCAAGTAA |
| -107 | 6 | ATAGTTGACTGATTTAGTCGGGAAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02863 | -127 | 6.8 | ATACCTGACTAAAACAGTCAAGTAA |
| -102 | 6.1 | ATAGTTGACCAAATTACTCGGGAAT | ||
| Enterobacter sp. 638 | Ent638_3028 | -131 | 6.8 | ATACCTGACTAAAACAGTCAAGTAA |
| -106 | 5.9 | ATAGTTGACCAATTTAGTCGGGAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_2493 | -138 | 4.9 | ATAGTTGAGTAAATTACCAGGTTAA |
| -88 | 5.9 | ATACTTGACCAATTTACTCGGGAAT | ||
| Yersinia pestis KIM | y1333 | -29 | 5.3 | ATAGTTGAGTGAATTACTAGGTTAA |
| -4 | 6.6 | ATAGTTGACTAAAACACTCAAGAAT | ||
| Serratia proteamaculans 568 | Spro_3628 | -94 | 5.4 | ATACTTGAGTAAATTACTAGGTTAA |
| -69 | 6.2 | ATAGTTGACTGATTTACTCAGGAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3238 | -105 | 5.2 | ATACTTGAGTGTTTTACTCGGTTAA |
| -80 | 6.2 | ATAGTTGACTAAAACACTCGGGAAT | ||
| Edwardsiella tarda EIB202 | ETAE_2816 | -114 | 5.7 | ATACCTGACTAAAATAGTAGGATAA |
| -89 | 6.6 | ATAGTTGACTGAAATAGTCAGGAAT | ||
| Proteus mirabilis HI4320 | PMI1861 | -88 | 6.2 | ATACCTGACTAAAACACTCAGATAA |
| -63 | 6.6 | ATAGTTGACTAAATTACTCAGGAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3284 | -90 | 5.4 | ATAGTTGAGTAAATTACTAGGTTAA |
| -65 | 6.6 | ATAGTTGACTAAAATACTCAGGAAT | ||
|
Position: -37
Score: 6.3 Sequence: ATAACCGACAAGAGTAGTCAACTAT
Locus tag: YPE_3131
|
||||
| YPE_3131 | -37 | 6.3 | ATAACCGACAAGAGTAGTCAACTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nfuA | ||||
| Ortholog function: NfuA Fe-S protein maturation | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3414 | -37 | 6.9 | ATAACCAACTAAAATAGTCAACTAT |
| Salmonella typhimurium LT2 | STM3511 | -37 | 6.9 | ATAACCAACTAAAATAGTCAACTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04835 | -37 | 6.7 | ATAACCAAGTAAAATAGTCAACTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03784 | -37 | 6.5 | ATAACCCAGTAAAATAGTCAACTAT |
| Enterobacter sp. 638 | Ent638_3827 | -37 | 6.1 | ATACCCAAGTATTTTAGTCAACTAT |
| Erwinia amylovora ATCC 49946 | EAM_3259 | -37 | 6.7 | ATAACCAACTGAATTAGTCAACTAT |
| Yersinia pestis KIM | y3903 | -37 | 6.3 | ATAACCGACAAGAGTAGTCAACTAT |
| Serratia proteamaculans 568 | Spro_4634 | -46 | 5.7 | ATAACCTAGTATAGAAGTCAACTAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4134 | -38 | 5.6 | ATAACCGATAAGTGCAGTCAACTAT |
| Edwardsiella tarda EIB202 | ETAE_3288 | -37 | 5.9 | ATAACCGACCGGAGAAGTCAACTAT |
| Proteus mirabilis HI4320 | PMI2926 | -38 | 6.3 | ATAACCAACCAGAACAGTCAACTAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0198 | -37 | 6.3 | ATAACCAACTATAGCAGTCAACTAT |
|
Position: -118
Score: 6 Sequence: GTACTTGAATGAAATACTCAGGTAT
Locus tag: YPE_4029
|
||||
| YPE_4029 | -118 | 6 | GTACTTGAATGAAATACTCAGGTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: erpA | ||||
| Ortholog function: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0156 | -89 | 4.9 | ATACTTGAACGAAATACCAGGGTAT |
| Salmonella typhimurium LT2 | STM0204.S | -89 | 4.9 | ATACTTGAACGAATTACCAGGGTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_03211 | -88 | 5.2 | ATACTTGAATGAAATACCAGGGTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00171 | -89 | 4.7 | ATACTTGAACGATTTACCAGGGTAT |
| Enterobacter sp. 638 | Ent638_0696 | -87 | 5.1 | ATACTTGAATGAATTACCAGGGTAT |
| Yersinia pestis KIM | y0801 | -103 | 6 | GTACTTGAATGAAATACTCAGGTAT |
| Serratia proteamaculans 568 | Spro_0783 | -97 | 5.5 | ATACTTGAACGCAACACTCAGGTAT |
| Edwardsiella tarda EIB202 | ETAE_2776 | -99 | 5.8 | ATACTTGAATGGATTACTCGGGTAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0904 | -105 | 5.2 | AAACTTGAACGAACTAATCAGGTAT |