Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NarP regulog to Salmonella enterica subsp. enterica serovar Typhi str. E01-6750

Reference regulog properties
Source regulog: NarP - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrate; Nitrite
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. E01-6750
Orthologous TF(s) Salmonentericaenterica_010100010184
Regulated genes 13
Built upon 125 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. E01-6750
Locus tag Position Score Sequence
Position: -143
Score: 4.5
Sequence: TACCTCTCTGGCGGTA
Locus tag: Salmonentericaenterica_010100001647
Salmonentericaenterica_010100001647 -143 4.5 TACCTCTCTGGCGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Citrobacter koseri ATCC BAA-895 CKO_02206 -109 4.3 TACCTCCCTGGCGGTA
Position: -131
Score: 4.4
Sequence: TACCCATTATGAGTTA
Locus tag: Salmonentericaenterica_010100003977
Salmonentericaenterica_010100003977 -131 4.4 TACCCATTATGAGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: caiT
Ortholog function: L-carnitine/gamma-butyrobetaine antiporter
Salmonella typhimurium LT2 STM0074 -131 4.1 TACCCATCATGAGTTA
Position: -216
Score: 4.6
Sequence: TACTCAGAAGTGAGTA
Locus tag: Salmonentericaenterica_010100004777
Salmonentericaenterica_010100004777 -216 4.6 TACTCAGAAGTGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655 b1241 -215 4.7 TACCCAGAAGTGAGTA
Salmonella typhimurium LT2 STM1749 -216 4.6 TACTCAGAAGTGAGTA
Citrobacter koseri ATCC BAA-895 CKO_01318 -216 4.6 TACTCAGAAGTGAGTA
Yersinia pestis KIM y2023 -260 4 TACCTAAGAATAGTTA
Serratia proteamaculans 568 Spro_2704 -252 4 TACCCAAGAGTAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -289 4 CACCCACAAATAGGTA
Edwardsiella tarda EIB202 ETAE_1508 -239 4.4 TACCCAAGAATGAGTA
Position: -30
Score: 4.5
Sequence: TACCTCGAAGTGAGCA
Locus tag: Salmonentericaenterica_010100011987
Salmonentericaenterica_010100011987 -30 4.5 TACCTCGAAGTGAGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase maturation
Escherichia coli str. K-12 substr. MG1655 b3739 -31 4.6 TACCTCGAAGGGAGCA
Salmonella typhimurium LT2 STM3872 -30 4.5 TACCTCGAAGTGAGCA
Citrobacter koseri ATCC BAA-895 CKO_00079 -30 4.6 TACCTCGAAGGGAGCA
Serratia proteamaculans 568 Spro_0001 -33 4.6 TACCTCCTCAGGGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4519 -33 4.3 TACCTCTGAAAAGGTA
Edwardsiella tarda EIB202 ETAE_3526 -156 4.4 TACCTCCTGGGGGGTA
Position: -48
Score: 4.3
Sequence: TTCCCATAATTGGGTA
Locus tag: Salmonentericaenterica_010100017116
Salmonentericaenterica_010100017116 -48 4.3 TTCCCATAATTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcB
Ortholog function: Aerobic respiration control sensor protein arcB (EC 2.7.3.-)
Escherichia coli str. K-12 substr. MG1655 b3210 -112 4.6 TACCTCCAACGGAGTA
Salmonella typhimurium LT2 STM3328 -48 4.3 TTCCCATAATTGGGTA
Citrobacter koseri ATCC BAA-895 CKO_04614 -49 3.8 TGCTCAGAATTGAGTA
Position: -99
Score: 3.7
Sequence: TAACCAATAAATGGTA
Locus tag: Salmonentericaenterica_010100028094
Salmonentericaenterica_010100028094 -99 3.7 TAACCAATAAATGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeaR
Ortholog function: Conserved hypothetical protein
Citrobacter koseri ATCC BAA-895 CKO_01824 -234 3.7 TAACCAATAAATGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1474 -170 4.2 TAACCACAATTGAGTA
Position: -169
Score: 4.3
Sequence: TTACCCTTAATGAGTA
Position: -59
Score: 4.5
Sequence: TAACTCGTTATAGGTA
Locus tag: Salmonentericaenterica_010100028739
Salmonentericaenterica_010100028739 -169 4.3 TTACCCTTAATGAGTA
-59 4.5 TAACTCGTTATAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narX
Ortholog function: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Escherichia coli str. K-12 substr. MG1655 b1222 -228 4 TTACCCATAGTGAGTA
-118 3.8 TAACTCTTTCCGGGTA
Salmonella typhimurium LT2 STM1766 -230 4.3 TTACCCTTAATGAGTA
-120 4.5 TAACTCGTTATAGGTA
Citrobacter koseri ATCC BAA-895 CKO_01297 -249 4.4 TGCCCCTTAGTGAGTA
-139 4.5 TAACTCGTTATAGGTA
Serratia proteamaculans 568 Spro_2899 -138 4.7 TACTTCGTTAGAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2029 -217 4.2 CACTCCTTAATGAGTA
-106 4.7 TACTCACTAGTGGGTA
Proteus mirabilis HI4320 PMI3569 -73 4.5 TACTCCCTTTGGAGTA
Position: -91
Score: 4.2
Sequence: TAATCGTTAATGGGTA
Locus tag: Salmonentericaenterica_010100039202
Salmonentericaenterica_010100039202 -91 4.2 TAATCGTTAATGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: modA
Ortholog function: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Escherichia coli str. K-12 substr. MG1655 b0763 -90 3.9 TACCTCACAAAGGTTA
Salmonella typhimurium LT2 STM0781 -91 4.2 TAATCGTTAATGGGTA
Citrobacter koseri ATCC BAA-895 CKO_02372 -90 4 TAACCTCAATTGGGTA
Position: -104
Score: 4.3
Sequence: TACCTGATAGTGGGTA
Locus tag: Salmonentericaenterica_010100039446
Salmonentericaenterica_010100039446 -104 4.3 TACCTGATAGTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfbV
Ortholog function: Predicted membrane protein
Escherichia coli str. K-12 substr. MG1655 b2295 -104 4.3 TACCTGATAGTGGGTA
Salmonella typhimurium LT2 STM2336 -104 4.3 TACCTGATAGTGGGTA
Citrobacter koseri ATCC BAA-895 CKO_00500 -105 4.3 TACCTGATAGTGGGTA