Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Salmonella enterica subsp. enterica serovar Typhi str. E01-6750

Type Regulator Effector Pathway Genes Sites
TF AcrR Rhodamine 6G; Ethidium bromide; Proflavin Multidrug resistance 2 2
TF AllR Allantoin Allantoin utilization 1 1
TF AraC Arabinose Arabinose utilization 1 1
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 12 26
TF BirA Biotin Biotin biosynthesis 1 1
TF Crp Cyclic 3',5'-AMP Carbon catabolism 185 420
TF CueR Copper ion, (Cu+) Copper resistance 2 2
TF DeoR Deoxyribonucleoside utilization 2 2
TF ExuR Galacturonate Galacturonate utilization 1 1
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 2 2
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 7 11
TF Fnr Oxygen Energy metabolism; Anaerobic metabolism 71 116
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Central carbohydrate metabolism 15 19
TF FucR L-fuculose-1-phosphate Fucose utilization 2 2
TF Fur Iron ion, (Fe2+) Iron homeostasis 26 75
TF GalR/GalS Galactose Galactose utilization 3 4
TF GlpR Glycerol 3-phosphate Glycerol utilization 3 3
TF GntR Gluconate Gluconate utilization 3 6
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 4 4
TF HutC cis-Urocanic acid Histidine utilization 1 2
TF IlvY 2-Acetolactate Branched-chain amino acid biosynthesis 1 1
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 2 3
TF KdgR 2-keto-3-deoxygluconate Pectin and polygalacturonate utlization 6 8
TF LeuO Guanosine 3',5'-bis(diphosphate) 1 1
TF LexA DNA damage SOS response 16 18
TF LldR L-lactate Lactate utilization 1 1
TF LsrR 4,5-dihydroxypentan-2,3-dione Quorum sensing; Biofilm formation 2 2
TF MarR Salicylate; Tetracycline; Chloramphenicol Antibiotic resistance 1 2
TF MetR Homocysteine Methionine biosynthesis 2 3
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 4 4
TF ModE Molybdate Molybdopterin biosynthesis; Molybdenum homeostasis 3 3
TF MprA 2,4-Dinitrophenol; Carbonyl cyanide m-chlorophenylhydrazone Multidrug resistance 2 2
TF NadR NAD NAD biosynthesis 3 3
TF NagC N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 1 1
TF NarP Nitrate; Nitrite Nitrate and nitrite respiration 13 16
TF NhaR Potassium ion Osmotic stress response 1 1
TF NikR Nickel ion, (Ni2+) Nickel homeostasis 2 2
TF NorR Nitric oxide Nitrosative stress response 2 3
TF NrdR Deoxyribonucleotides Ribonucleotide reductases 2 4
TF NsrR Nitric oxide Nitrosative stress response 11 15
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 6 10
TF PdhR Pyruvate Pyruvate metabolism 1 1
TF PhnR 2-aminoethylphosphonate Phosphonate utilization; 2-aminoethylphosphonate utilization 2 2
TF PurR Hypoxanthine; Guanine Purine metabolism 18 22
TF QorR Energy metabolism 2 2
TF RbsR Ribose Ribose utilization 1 1
TF RhaR Rhamnose Rhamnose utilization 1 1
TF RhaS Rhamnose Rhamnose utilization 3 3
TF RutR Uracil Pyrimidine utilization 1 1
TF SdaR Glycerate Glucarate utilization; Galactarate utilization 2 4
TF SiaR Glucosamine-6-phosphate Sialic acid utilization 1 1
TF SoxR Paraquat Superoxide stress response 2 2
TF TrpR Tryptophan Tryptophan biosynthesis 3 3
TF TyrR Tyrosine; Phenylalanine Aromatic amino acid metabolism 5 9
TF UlaR Ascorbate-6-phosphate Ascorbate utilization 1 2
TF UxuR Glucuronate Glucuronate utilization 2 4
TF XapR Deoxyinosine; Xanthosine Xanthosine utilization 1 1
TF YiaJ Ascorbate-6-phosphate L-lyxose utilization 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 4 4