Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Salmonella enterica subsp. enterica serovar Typhi str. E00-7866

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. E00-7866
Orthologous TF(s) Salmoneentericaenterica_010100003402, Salmoneentericaenterica_010100003397
Regulated genes 223
Built upon 2301 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. E00-7866
Locus tag Position Score Sequence
Position: -180
Score: 4.3
Sequence: AAACGTGATTGCTGACACAATA
Locus tag: Salmoneentericaenterica_010100000140
Salmoneentericaenterica_010100000140 -180 4.3 AAACGTGATTGCTGACACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutU
Ortholog function: urocanate hydratase
Citrobacter koseri ATCC BAA-895 CKO_02357 -123 3.8 AAGCGTGATTGCTGACGCAATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00795 -124 4 AAACGTGATTGCTGACGCAATA
Enterobacter sp. 638 Ent638_1263 -120 4 AAGCGTGATAGCTAACGCAATA
Erwinia amylovora ATCC 49946 EAM_1253 -121 3.8 TTTTGTGACAAAGCTGGCACAA
Yersinia pestis KIM y4038 -261 4.9 ATATGTGATTTGGTGCGCAAAT
Serratia proteamaculans 568 Spro_0805 -196 4.8 TATTGTGATTTGACGCGCAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3193 -203 4.7 ATTTGTGATTATAAACACAAAA
Position: -103
Score: 4.6
Sequence: CTTAGTGATCTACCTCACCTTT
Locus tag: Salmoneentericaenterica_010100000195
Salmoneentericaenterica_010100000195 -103 4.6 CTTAGTGATCTACCTCACCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: b2462
Ortholog function: putative carboxysome structural protein, ethanol utilization
Escherichia coli str. K-12 substr. MG1655 b2462 -103 4.6 CTTAGTGATCTACCTCACCTTT
Salmonella typhimurium LT2 STM2470 -168 3.8 AAATGTGATGCACCACGATATT
-103 4.6 CTTAGTGATCTACCTCACCTTT
Citrobacter koseri ATCC BAA-895 CKO_00333 -103 4.6 CTTAGTGATCTACTTCACCTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02796 -102 4.3 CTGAGTGATCCACTTCACCTTT
Position: -272
Score: 3.9
Sequence: TTTTGTTGTTCCTTTCACGTAT
Position: -53
Score: 3.7
Sequence: AAGTGTGAATCAACACACTCAT
Locus tag: Salmoneentericaenterica_010100000245
Salmoneentericaenterica_010100000245 -272 3.9 TTTTGTTGTTCCTTTCACGTAT
-53 3.7 AAGTGTGAATCAACACACTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: talA
Ortholog function: Transaldolase (EC 2.2.1.2)
Escherichia coli str. K-12 substr. MG1655 b2464 -83 4 TTTTTTGATGCGTTTAGCGAAA
-53 3.9 AAGTGTGAATTAACGCACTCAT
Salmonella typhimurium LT2 STM2473 -53 3.7 AAGTGTGAATCAACACACTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02798 -80 3.7 TTTGGTTATGTACCTCATCAAT
Enterobacter sp. 638 Ent638_2959 -152 3.6 ATTTGTTATCAATTTATAACAA
-83 3.9 TTTTGTTAAGTACGTCATGTAT
Position: -11
Score: 3.6
Sequence: TGGAGTGATTTATGTCCCGTAA
Locus tag: Salmoneentericaenterica_010100000250
Salmoneentericaenterica_010100000250 -11 3.6 TGGAGTGATTTATGTCCCGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tktB
Ortholog function: Transketolase (EC 2.2.1.1)
Escherichia coli str. K-12 substr. MG1655 b2465 -83 4 TTTTTTGATGCGTTTAGCGAAA
-53 3.9 AAGTGTGAATTAACGCACTCAT
Salmonella typhimurium LT2 STM2474 -53 3.7 AAGTGTGAATCAACACACTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02799 -80 3.7 TTTGGTTATGTACCTCATCAAT
Enterobacter sp. 638 Ent638_2960 -152 3.6 ATTTGTTATCAATTTATAACAA
-83 3.9 TTTTGTTAAGTACGTCATGTAT
Position: -80
Score: 4.2
Sequence: AACTGTGATGTATATCGAAGTG
Locus tag: Salmoneentericaenterica_010100000420
Salmoneentericaenterica_010100000420 -80 4.2 AACTGTGATGTATATCGAAGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: deoC
Ortholog function: 2-deoxyribose-5-phosphate aldolase
Escherichia coli str. K-12 substr. MG1655 b4381 -149 4.6 TTATTTGAACCAGATCGCATTA
-96 4.5 AATTGTGATGTGTATCGAAGTG
Salmonella typhimurium LT2 STM4567 -133 4.9 TAATTTGATTCAGATCTCATTA
-80 4.2 AACTGTGATGTATATCGAAGTG
Citrobacter koseri ATCC BAA-895 CKO_03410 -134 4.2 TTATTTGAAGTGGATCTCGTTA
-81 4.2 AACTGTGATGTATATCGAAGTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04837 -158 5.2 ATTTGTGATTTTAATCACGTTA
-105 3.7 AACTGTGATGAATGTCGAAGTG
Enterobacter sp. 638 Ent638_0541 -151 4.6 AAATTTGAAGTGGATCTCATTA
-98 3.7 AACTGTGATGAATGTCGAAGTG
Erwinia amylovora ATCC 49946 EAM_0615 -233 4.6 TGATGTGATAATTCTAACATTA
Yersinia pestis KIM y3743 -169 3.7 TGCGGTGAGATGGATCTCAATT
Serratia proteamaculans 568 Spro_0660 -262 4.6 ATTTGTGAACGATATCGCGTTA
-240 5.5 TTTTGTGATGGTCTTCACATAT
-188 3.8 TAGTGTGACTGTGAACGCGAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0727 -282 4.4 AAGTGTGAATGAATGCACAAAA
Proteus mirabilis HI4320 PMI2416 -267 4.4 ATATGTGAGTTACTTCGCAACT
-135 5.6 TTTTGTGATTCTGATCACAATT
-83 4.5 TATTGTGACAGAAAGCACATCT
Position: -337
Score: 4.2
Sequence: TTTTGTGGCCTGCTTCAAACTT
Position: -209
Score: 4
Sequence: TTTTATGATTTGGTTCAACTCT
Locus tag: Salmoneentericaenterica_010100000625
Salmoneentericaenterica_010100000625 -337 4.2 TTTTGTGGCCTGCTTCAAACTT
-209 4 TTTTATGATTTGGTTCAACTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptsH
Ortholog function: PTS system phosphocarrier protein
Escherichia coli str. K-12 substr. MG1655 b2415 -209 3.9 TTTTATGATTTGGTTCAATTCT
Salmonella typhimurium LT2 STM2431 -209 4.4 TTTTATGATTTGGTTCAAATCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02762 -206 4 TTTTATGATTTGGTTCAAGTCT
Enterobacter sp. 638 Ent638_2943 -271 4.4 TTTTGTGGTCCACTTCAAACTT
-144 4 TTTTATGATTTGGTTCAAGTCT
Serratia proteamaculans 568 Spro_3448 -149 3.6 TTTTTTGATCTGAAGTGCCAAA
Proteus mirabilis HI4320 PMI1828 -275 4.4 TTTTGTGGTAGAGATCAAACTT
-115 3.6 TAACGTAACATGGCTTATATTA
Position: -241
Score: 4
Sequence: GAATGCGATTACAGTCACATTA
Position: -107
Score: 3.9
Sequence: AATCGTGATTTTGTCCAGATAC
Locus tag: Salmoneentericaenterica_010100001643
Salmoneentericaenterica_010100001643 -241 4 GAATGCGATTACAGTCACATTA
-107 3.9 AATCGTGATTTTGTCCAGATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pck
Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b3403 -240 4.2 GAATGCGATTCCACTCACAATA
-137 4 TTTCGTGACAGGAATCACGGAG
Salmonella typhimurium LT2 STM3500 -241 4 GAATGCGATTACAGTCACATTA
-107 3.9 AATCGTGATTTTGTCCAGATAC
Citrobacter koseri ATCC BAA-895 CKO_04825 -107 3.9 AATCGTGATTTTGTCCAGATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03773 -242 3.7 GAAAGCGATTACATTCACATTT
-138 3.7 CTTCGTGACAGGAGTCACCGTT
Enterobacter sp. 638 Ent638_3816 -241 4.1 GTATGCGATTACATTCACATTA
Yersinia pestis KIM y3918 -130 4.2 ATTCGTGTTCCATCTCTCATAA
-80 3.8 ATATTTGATAGCTATCGCTGTT
Serratia proteamaculans 568 Spro_4617 -80 4.1 ATATTTGATACCTATCGCGGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4106 -81 4 TTTTATGATTGCTATCGCGGTT
Edwardsiella tarda EIB202 ETAE_3277 -82 3.9 TTTTTTGATGACTATCTCGGTT
Proteus mirabilis HI4320 PMI3015 -131 4 ATTTGTGCATTAGTTCTCGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0100 -86 3.8 TTTTTTGATAACTATCGCTGTT
Position: -82
Score: 5.6
Sequence: TAATGTGATTTACATCACACAT
Locus tag: Salmoneentericaenterica_010100002112
Salmoneentericaenterica_010100002112 -82 5.6 TAATGTGATTTACATCACACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: raiA
Ortholog function: stationary phase translation inhibitor and ribosome stability factor
Escherichia coli str. K-12 substr. MG1655 b2597 -81 4.8 TTATGAGATTTTCATCACACAT
Citrobacter koseri ATCC BAA-895 CKO_03918 -40 5.2 TAATGTGATTTAAATCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02919 -88 5.6 AAATGTGATTTATATCACACAT
Enterobacter sp. 638 Ent638_3076 -81 5.4 ATGTGTGATTTAGATCACACAT
Erwinia amylovora ATCC 49946 EAM_2617 -83 5.2 AAATGTGATTTCAATCACGATT
Serratia proteamaculans 568 Spro_0882 -83 4.8 ATACGTGATTTTCATCACGCAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3349 -86 4 AAAAGCGATCAATCTCACGCTT
Edwardsiella tarda EIB202 ETAE_2834 -82 3.8 ATCCGTGATTTTCCTCTCACAC
Proteus mirabilis HI4320 PMI0391 -82 4.6 AAAAGTGATCTTGATCATGTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1266 -87 5.1 AATAGTGATTTAGATCACCTTT
Position: -141
Score: 3.8
Sequence: GAATGTGAACTAAATCACTTCA
Locus tag: Salmoneentericaenterica_010100002380
Salmoneentericaenterica_010100002380 -141 3.8 GAATGTGAACTAAATCACTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rnk
Ortholog function: Regulator of nucleoside diphosphate kinase
Escherichia coli str. K-12 substr. MG1655 b0610 -140 3.8 GAATGTGACGCAAATCACTTCA
Salmonella typhimurium LT2 STM0616 -141 3.8 GAATGTGAACTAAATCACTTCA
Citrobacter koseri ATCC BAA-895 CKO_02549 -141 3.9 GAATGTGAGCTAAATCACTTCA
Enterobacter sp. 638 Ent638_1148 -187 4.1 AAATCTGAGAACGATCACGTTT
-140 3.8 GAATGTGACATTCATCACTTCA
Serratia proteamaculans 568 Spro_4382 -170 3.7 CTTCGTGATCGGGATCTCTTTC
-67 3.8 TTTTGTGCTGTTTTTCCGAATT
Edwardsiella tarda EIB202 ETAE_0492 -145 4.4 ATTTGTGAGCCAGCTCTCTTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4046 -127 3.7 GTTCGTGATCATGATCTCTTTA
Position: -116
Score: 4.4
Sequence: AAACGTGATTTCGTACACATCT
Locus tag: Salmoneentericaenterica_010100002525
Salmoneentericaenterica_010100002525 -116 4.4 AAACGTGATTTCGTACACATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiS
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0819 -116 4.7 AAATGTGATTTCGTACACATCT
Salmonella typhimurium LT2 STM0837 -116 4.4 AAACGTGATTTCGTACACATCT
Citrobacter koseri ATCC BAA-895 CKO_02299 -202 3.8 ATATGTGACAAACCGCTTATTA
-116 4.7 AAATGTGATTTCGTACACATCT
Enterobacter sp. 638 Ent638_1310 -119 4.7 AAATGTGATTTCGTACACATCT
Position: -125
Score: 4
Sequence: AGATGTGTACGAAATCACGTTT
Locus tag: Salmoneentericaenterica_010100002530
Salmoneentericaenterica_010100002530 -125 4 AGATGTGTACGAAATCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiT
Ortholog function: ABC transporter ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b0820 -124 4.4 AGATGTGTACGAAATCACATTT
Salmonella typhimurium LT2 STM0838 -124 4 AGATGTGTACGAAATCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_02298 -148 4.4 AGATGTGTACGAAATCACATTT
Enterobacter sp. 638 Ent638_1311 -125 4.4 AGATGTGTACGAAATCACATTT
Yersinia pestis KIM y2677 -295 3.9 TATCGTTATACCCGTCATACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3010 -41 4 TAATGCGCGCCAAATCACATTC
Edwardsiella tarda EIB202 ETAE_2518 -40 4.8 TAATGTGAACAAAATCACGTTA
Position: -139
Score: 3.7
Sequence: TGTTGTGATCATCCTCTTTTTT
Locus tag: Salmoneentericaenterica_010100002735
Salmoneentericaenterica_010100002735 -139 3.7 TGTTGTGATCATCCTCTTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aphA
Ortholog function: acid phosphatase/phosphotransferase
Escherichia coli str. K-12 substr. MG1655 b4055 -130 3.6 CATCCTGCTTTTCATCACAAAA
-57 4 TTTTGCAACAAATCTCACAATA
Salmonella typhimurium LT2 STM4249 -139 3.7 TGTTGTGATCATCCTCTTTTTT
Citrobacter koseri ATCC BAA-895 CKO_03845 -255 3.9 TATTGTGAATGCGTGTACAGAA
-224 3.7 GTGTGTGTGGTTTATCACACAT
Enterobacter sp. 638 Ent638_0259 -57 3.8 TTTTTTGACCATTCGCTCAATT
Edwardsiella tarda EIB202 ETAE_3469 -150 5 TTTTGTGATGAATGTCACGTAT
-98 3.7 AACATAGATCATGATCACATTA
Proteus mirabilis HI4320 PMI0729 -148 4.3 AAGTGTTAGATAGATCAAAAAA
-87 4.3 TAACGTGCGCTATATCTCATTT
-34 4.3 TTCTGTGATTAATATAAAAATT
Position: -183
Score: 4.5
Sequence: AAGTGTTATTTTGATCTCAAAA
Locus tag: Salmoneentericaenterica_010100002765
Salmoneentericaenterica_010100002765 -183 4.5 AAGTGTTATTTTGATCTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mltB
Ortholog function: membrane-bound lytic murein transglycosylase B
Escherichia coli str. K-12 substr. MG1655 b2701 -184 4.6 AAGTGTTATTTTGATCGCAAAA
Salmonella typhimurium LT2 STM2831 -182 4.4 AAGTGTTATTGTGATCGCAAAA
Citrobacter koseri ATCC BAA-895 CKO_04055 -184 4.5 AAGTGTTATTTTGATCTCAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03036 -296 4.3 AAGTGTTAAATGGATCGCAAAA
Serratia proteamaculans 568 Spro_3399 -136 4.1 TTCTGTGCTGCCCGTCACGTTT
Position: -93
Score: 4.3
Sequence: TTTTGAGATCAAAATAACACTT
Locus tag: Salmoneentericaenterica_010100002770
Salmoneentericaenterica_010100002770 -93 4.3 TTTTGAGATCAAAATAACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: srlA
Ortholog function: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b2702 -93 4.4 TTTTGCGATCAAAATAACACTT
Salmonella typhimurium LT2 STM2832 -93 4.3 TTTTGCGATCACAATAACACTT
Citrobacter koseri ATCC BAA-895 CKO_04056 -93 4.3 TTTTGAGATCAAAATAACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03037 -92 4.6 TTTTGCGATCCATTTAACACTT
Serratia proteamaculans 568 Spro_3569 -110 4.9 AATTGTGATCTATTTAAAACAA
Position: -268
Score: 4.4
Sequence: AATTGTGATCTATATTTAACAA
Locus tag: Salmoneentericaenterica_010100003085
Salmoneentericaenterica_010100003085 -268 4.4 AATTGTGATCTATATTTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: osmY
Ortholog function: Osmotically inducible protein OsmY
Salmonella typhimurium LT2 STM4561 -268 4.4 AATTGTGATCTATATTTAACAA
Position: -164
Score: 4
Sequence: AGGTGTTAAATTGATCACGTTT
Locus tag: Salmoneentericaenterica_010100003202
Salmoneentericaenterica_010100003202 -164 4 AGGTGTTAAATTGATCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyaA
Ortholog function: Adenylate cyclase (EC 4.6.1.1)
Salmonella typhimurium LT2 STM3939 -164 4 AGGTGTTAAATTGATCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_00148 -174 4 AGGTGTTAAATTGATCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04305 -147 4 AGGTGTTAAATTGATCACGTTT
Position: -159
Score: 3.1
Sequence: TACATTGACGTACTGCATGTAT
Locus tag: Salmoneentericaenterica_010100003402
Salmoneentericaenterica_010100003402 -159 3.1 TACATTGACGTACTGCATGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: crp
Ortholog function: cyclic AMP receptor protein
Escherichia coli str. K-12 substr. MG1655 b3357 -154 3.3 TACATTGATGTACTGCATGTAT
-136 3.3 GTATGCAAAGGACGTCACATTA
Salmonella typhimurium LT2 STM3466 -159 3.1 TACATTGACGTACTGCATGTAT
Citrobacter koseri ATCC BAA-895 CKO_04777 -160 3.1 TACATTGACGTACTGCATGTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03743 -158 3.3 TACATTGATGTACTGCATGTAT
Enterobacter sp. 638 Ent638_3784 -128 2.9 AAACATTACAGGCTGCAAACAT
Yersinia pestis KIM y3956 -309 3 AATTTAGACTACCCTTTCATTT
Serratia proteamaculans 568 Spro_4580 -121 3.5 ATTTATGACACGCCTCAAAACC
Proteus mirabilis HI4320 PMI2820 -135 3.3 TATTATAATCTATTCCTTATTA
Position: -188
Score: 3.9
Sequence: TAATGTGATGTCCTCTGCATAC
Locus tag: Salmoneentericaenterica_010100003407
Salmoneentericaenterica_010100003407 -188 3.9 TAATGTGATGTCCTCTGCATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhfA
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3356 -187 4.2 TAATGTGACGTCCTTTGCATAC
Salmonella typhimurium LT2 STM3465 -188 3.9 TAATGTGATGTCCTCTGCATAC
Citrobacter koseri ATCC BAA-895 CKO_04775 -187 3.3 GAATGTGATGTCCTCTGCATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03742 -188 3.5 TAATGTGAACTCCTCTGCATAC
Serratia proteamaculans 568 Spro_4579 -280 3.3 GGTTTTGAGGCGTGTCATAAAT
Position: -256
Score: 4.8
Sequence: TTGTGTGATCTAAATCAAGATT
Locus tag: Salmoneentericaenterica_010100003822
Salmoneentericaenterica_010100003822 -256 4.8 TTGTGTGATCTAAATCAAGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ychE
Ortholog function: putative channel protein
Escherichia coli str. K-12 substr. MG1655 b1242 -257 5.1 TTACGTGATCCAAATCAAATTT
Salmonella typhimurium LT2 STM1748 -256 4.8 TTGTGTGATCTAAATCAAGATT
Citrobacter koseri ATCC BAA-895 CKO_01319 -167 5 TTGCGTGATCCAGATCAAATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02198 -261 4.8 TTACGTGATTTAGATCAAGTAT
Enterobacter sp. 638 Ent638_2303 -256 4 AAACATGATCTGAATCAATTTA
Erwinia amylovora ATCC 49946 EAM_1899 -158 3.8 AAAGATGATGCAGATCATCAAT
Serratia proteamaculans 568 Spro_2703 -268 5.2 TTTTGTGATTTAAATCATAAAA
Proteus mirabilis HI4320 PMI1485 -290 5.3 TAAAGTGATCTACATCACAATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2495 -295 4.9 TATATTGATCTTAATCACATAA
Position: -242
Score: 4.9
Sequence: AATCTTGATTTAGATCACACAA
Locus tag: Salmoneentericaenterica_010100003827
Salmoneentericaenterica_010100003827 -242 4.9 AATCTTGATTTAGATCACACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655 b1241 -241 5 AAATTTGATTTGGATCACGTAA
Salmonella typhimurium LT2 STM1749 -242 4.9 AATCTTGATTTAGATCACACAA
Citrobacter koseri ATCC BAA-895 CKO_01318 -242 4.9 AAATTTGATCTGGATCACGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -237 4.7 ATACTTGATCTAAATCACGTAA
Enterobacter sp. 638 Ent638_2304 -253 4.1 TAAATTGATTCAGATCATGTTT
Erwinia amylovora ATCC 49946 EAM_1900 -223 3.9 ATTGATGATCTGCATCATCTTT
Yersinia pestis KIM y2023 -286 5.3 TTTTGTGATTTAAATCACGAAA
Serratia proteamaculans 568 Spro_2704 -278 5.1 TTTTATGATTTAAATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -315 4.5 AAGTTCGATGTTGATCACAAAA
Edwardsiella tarda EIB202 ETAE_1508 -265 5 TTTCGTGACCTTAATCACAAAA
Proteus mirabilis HI4320 PMI1486 -246 5.4 TATTGTGATGTAGATCACTTTA
-187 3.7 AAAGGAGATCTTTTTAAAATAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -237 3.7 TATTTTTATTAGATTAAAAATT
-138 4.6 TTATGTGATTAAGATCAATATA
Position: -66
Score: 3.9
Sequence: TAATGTATTTTTATTCATAATT
Locus tag: Salmoneentericaenterica_010100004007
Salmoneentericaenterica_010100004007 -66 3.9 TAATGTATTTTTATTCATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argE
Ortholog function: acetylornithine deacetylase
Escherichia coli str. K-12 substr. MG1655 b3957 -66 3.7 TAGTGTATTTTTATTCATAAAT
Salmonella typhimurium LT2 STM4120 -66 3.9 TAATGTATTTTTATTCATAATT
Citrobacter koseri ATCC BAA-895 CKO_03037 -27 4.3 TAATGTATTTTTATTCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04246 -27 4 TATTGTATTTTTATTCAAAATA
Enterobacter sp. 638 Ent638_4029 -66 4.2 TAGTGTATTTTTATTCACATTT
Erwinia amylovora ATCC 49946 EAM_0137 -66 3.8 TATTGTATTTTTATTCACTATT
Yersinia pestis KIM y0309 -223 3.6 TATTTTTATTTATGTCAATAAA
Serratia proteamaculans 568 Spro_4782 -71 4.3 TATTGTATTTTTATTCACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0191 -65 4 TATTGTATTTTTATTCAAAATA
Edwardsiella tarda EIB202 ETAE_3483 -65 3.9 TATTGTATTTTTATTCATAATT
Proteus mirabilis HI4320 PMI3236 -65 3.9 TAATGTATTTTTATTCAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4745 -65 3.9 TAATGTATTTTTATTCAAAAAA
Position: -44
Score: 3.5
Sequence: AATTATGAATAAAAATACATTA
Locus tag: Salmoneentericaenterica_010100004012
Salmoneentericaenterica_010100004012 -44 3.5 AATTATGAATAAAAATACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Salmonella typhimurium LT2 STM4121 -44 3.5 AATTATGAATAAAAATACATTA
Citrobacter koseri ATCC BAA-895 CKO_03036 -110 4 ATTTGTGAATAAAAATACATTA
Enterobacter sp. 638 Ent638_4028 -44 3.8 AAATGTGAATAAAAATACACTA
Yersinia pestis KIM y0310 -43 3.7 TTTATTGACATAAATAAAAATA
Serratia proteamaculans 568 Spro_4781 -167 4 TATTGTGAATAAAAATACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0192 -159 3.5 TATTTTGAATAAAAATACAATA
Edwardsiella tarda EIB202 ETAE_3482 -160 3.4 AATTATGAATAAAAATACAATA
Proteus mirabilis HI4320 PMI3237 -57 3.6 TTTTTTGAATAAAAATACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu4744 -59 3.6 TTTTTTGAATAAAAATACATTA
Position: -60
Score: 5
Sequence: TTTTGTGATGAGGGTCACGAAA
Locus tag: Salmoneentericaenterica_010100004542
Salmoneentericaenterica_010100004542 -60 5 TTTTGTGATGAGGGTCACGAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhcN
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3238 -60 5.1 TTTTGTGATATGGGTCACGAAA
Salmonella typhimurium LT2 STM3361 -60 5 TTTTGTGATGAGGGTCACGAAA
Citrobacter koseri ATCC BAA-895 CKO_04644 -60 5 TTTTGTGATGAGGGTCACGAAA
Enterobacter sp. 638 Ent638_3673 -58 5 TTTTGTGATGAGGGTCACGAAA
Position: -200
Score: 3.6
Sequence: AAGGTTGAGTTAGATCGCAGAA
Locus tag: Salmoneentericaenterica_010100004901
Salmoneentericaenterica_010100004901 -200 3.6 AAGGTTGAGTTAGATCGCAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yejG
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b2181 -158 3.7 AAACGTGACCACGCCCGCAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02614 -204 3.8 AAAGTTGTTTTGGATCACAGAA
Erwinia amylovora ATCC 49946 EAM_2233 -177 3.6 AAATGAGCATTACTTCTCAAAA
Yersinia pestis KIM y2914 -238 4.4 AAATGGGATCTGAATCCCAAAT
Serratia proteamaculans 568 Spro_3250 -214 4.2 AAATGCGAGCTGAGTCGCAAAA
-121 4.1 GCTTGTGATGTTTTTTACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2740 -178 4 ATTCGTGATCAGTTTGGCATTA
-101 3.8 TGTTGTTTTTTTGTTCACGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2865 -185 4.1 AAATGAGAGATTGATCTCACTT
-183 3.6 ATGAGAGATTGATCTCACTTTT
-141 3.8 TAATGTAATACTATAAACACAA
Position: -293
Score: 3.9
Sequence: TTATGTGATCTCACGCAGCGTT
Position: -149
Score: 3.9
Sequence: AAACGTGAAGTTAATCACTTCA
Locus tag: Salmoneentericaenterica_010100004986
Salmoneentericaenterica_010100004986 -293 3.9 TTATGTGATCTCACGCAGCGTT
-149 3.9 AAACGTGAAGTTAATCACTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaT
Ortholog function: L-rhamnose-proton symport
Escherichia coli str. K-12 substr. MG1655 b3907 -145 4.1 AGATGTGAAGCAAATCACCCAC
Salmonella typhimurium LT2 STM4050 -293 3.6 TTATGTGACCTCACGCAGCGTT
-149 3.9 AAACGTGAAGTTAATCACTTCA
Citrobacter koseri ATCC BAA-895 CKO_03094 -148 4.1 ATATGTGAGCCAAATCACCCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04216 -149 4.7 TTTTGTGATGTAGAACAACTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0450 -193 3.6 TTTTGTGATCCTGCCTATATCA
Position: -68
Score: 4.6
Sequence: TGATGTGATCGGTAGCACGTTT
Locus tag: Salmoneentericaenterica_010100005131
Salmoneentericaenterica_010100005131 -68 4.6 TGATGTGATCGGTAGCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yohJ
Ortholog function: LrgA family protein
Escherichia coli str. K-12 substr. MG1655 b2141 -68 4.9 TAATGTGATCGGTAGCACGTTT
Salmonella typhimurium LT2 STM2181 -68 4.6 TGATGTGATCGGTAGCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_00648 -68 4.6 TGATGTGATCGGTAGCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02582 -68 5 TGATGTGATCGGTAGCACATTT
Enterobacter sp. 638 Ent638_2744 -68 4.7 TGATGTGATCCGTAGCACGTTT
Yersinia pestis KIM y2654 -32 4.7 TAGTGTGATGGGTAGCACAGAA
Serratia proteamaculans 568 Spro_1570 -62 4.3 ATTTGTGGCGGAGGTCACAGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2828 -69 4.5 ATTCGTGATCTGTGGCACGTAA
Edwardsiella tarda EIB202 ETAE_1164 -68 4.9 TGATGTGATCAGTAGCACATTT
Proteus mirabilis HI4320 PMI0645 -71 5.2 TATTGTGATCCATAGCACACTT
Position: -78
Score: 4.8
Sequence: CAATGAGATTTAGATCACATAT
Locus tag: Salmoneentericaenterica_010100005141
Salmoneentericaenterica_010100005141 -78 4.8 CAATGAGATTTAGATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cdd
Ortholog function: cytidine deaminase
Escherichia coli str. K-12 substr. MG1655 b2143 -128 4.3 ATTTGCGATGCGTCGCGCATTT
-78 5.1 TAATGAGATTCAGATCACATAT
Salmonella typhimurium LT2 STM2183 -128 4.2 ATTTGCGATACGTCGCGCATTT
-78 4.8 CAATGAGATTTAGATCACATAT
Citrobacter koseri ATCC BAA-895 CKO_00646 -128 4.3 ATTTGCGATGCGTCGCGCATTT
-78 4.8 CAATGAGATTTGGATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02584 -78 4.4 GAATGAGATATTCATCACATAT
Enterobacter sp. 638 Ent638_2746 -127 4.2 ATTTGCGATGCGTCGCGCAATT
-77 4.9 TAATGAGAACTGGATCACATAT
Erwinia amylovora ATCC 49946 EAM_2202 -124 3.9 ACTTGCGATAAGTCTCTCATTT
-104 4.1 TTTGGTGATGCATTTCATTTAT
-74 4.7 TAGAGCGATTTAGATCACATAT
Yersinia pestis KIM y2657 -75 5 TAATGAGATATAAATCACAATT
Serratia proteamaculans 568 Spro_1568 -127 4.1 ACTTGCGATACATCTCGCAATT
-77 4.5 TAAAGAGATTTACATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2830 -130 4.6 AATTGAGATACATCTCGCATTT
-79 4.5 TAAAGAGATTCCGATCACAATT
Edwardsiella tarda EIB202 ETAE_1162 -76 4.9 AAAAGTGATTATTATCACAAAT
Proteus mirabilis HI4320 PMI0643 -132 4.4 ATTTGAGATGTATCTCCCAATT
-82 5.1 AAATATGATTTTAATCACATAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1547 -75 4.7 CTATATGATATTTATCACATTA
Position: -121
Score: 4.9
Sequence: TTTTGTGAATTCTTTCACAGAA
Locus tag: Salmoneentericaenterica_010100005156
Salmoneentericaenterica_010100005156 -121 4.9 TTTTGTGAATTCTTTCACAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeiT
Ortholog function: predicted oxidoreductase
Escherichia coli str. K-12 substr. MG1655 b2146 -112 4.8 ATTTGTGAATCTTTTCACAGTT
Salmonella typhimurium LT2 STM2186 -201 3.5 ATTTATTATCCCTTTAAAATTG
-168 4.1 TATTATGATATAAGGAACAAAT
-121 4.9 TTTTGTGAATTCTTTCACAGAA
Position: -235
Score: 5.2
Sequence: ATGTGTGAAGTTGATCACATAT
Locus tag: Salmoneentericaenterica_010100005226
Salmoneentericaenterica_010100005226 -235 5.2 ATGTGTGAAGTTGATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: proP
Ortholog function: L-Proline/Glycine betaine transporter ProP
Salmonella typhimurium LT2 STM4290 -235 5.2 ATGTGTGAAGTTGATCACATAT
Serratia proteamaculans 568 Spro_1860 -132 5.1 TTACGTGATTCGCATCACACAA
Position: -222
Score: 3.3
Sequence: TCGCGTGATAATTTTCATGCTT
Position: -178
Score: 4.2
Sequence: TCATGTGACCCATATCTCCTTA
Position: -117
Score: 4.2
Sequence: TATTGTGATTTTGCGCATTAAA
Locus tag: Salmoneentericaenterica_010100005691
Salmoneentericaenterica_010100005691 -222 3.3 TCGCGTGATAATTTTCATGCTT
-178 4.2 TCATGTGACCCATATCTCCTTA
-117 4.2 TATTGTGATTTTGCGCATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glgS
Ortholog function: glycogen synthesis protein GlgS
Escherichia coli str. K-12 substr. MG1655 b3049 -225 3.4 AATAGTTTCCTTGCTTACATTT
-203 3.4 ATCTGTGTTAATAATAACACAG
-124 3.8 AAGTGTGATCGGGGACAATATA
Salmonella typhimurium LT2 STM3197 -222 3.3 TCGCGTGATAATTTTCATGCTT
-178 4.2 TCATGTGACCCATATCTCCTTA
-117 4.2 TATTGTGATTTTGCGCATTAAA
Citrobacter koseri ATCC BAA-895 CKO_04437 -118 3.4 AAGTGTGATGTCAGGCAACTGA
Position: -42
Score: 4.5
Sequence: AATTGTGACAATTGTCATATTA
Locus tag: Salmoneentericaenterica_010100005771
Salmoneentericaenterica_010100005771 -42 4.5 AATTGTGACAATTGTCATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yegH
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b2063 -43 4.6 AATTGTGACATTTGTCATACAA
Salmonella typhimurium LT2 STM2119 -42 4.5 AATTGTGACAATTGTCATATTA
Citrobacter koseri ATCC BAA-895 CKO_00719 -42 4.5 AATTGTGACAACTGTCATATAA
Enterobacter sp. 638 Ent638_2677 -42 4.4 AAGTGTGACAAATGTCATATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1559 -193 3.9 ATTTGTTAATGTGATCACATGT
Position: -176
Score: 4.2
Sequence: ATTTGAGATCGGGATCACTGAT
Locus tag: Salmoneentericaenterica_010100005916
Salmoneentericaenterica_010100005916 -176 4.2 ATTTGAGATCGGGATCACTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdaC
Ortholog function: Serine transporter
Escherichia coli str. K-12 substr. MG1655 b2796 -179 4.2 ATTTGAGATCAAGATCACTGAT
Salmonella typhimurium LT2 STM2970 -176 4.2 ATTTGAGATCGGGATCACTGAT
Citrobacter koseri ATCC BAA-895 CKO_04152 -176 4.1 ATTTGGGATCGCGATCACTGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03139 -158 4.2 ATTTGAGATCGCGATCACTGAT
Enterobacter sp. 638 Ent638_3249 -176 4.1 ATTTGGGATCAGGATCACTGAT
Erwinia amylovora ATCC 49946 EAM_1294 -300 3.6 ATTTGTTAAAAATCGCAAAAAA
-180 3.9 AAATGTGATTCCGATCACCGGC
Yersinia pestis KIM y2862 -286 4.3 AATTGAGATCACGATCACGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3158 -195 3.7 TTCTGTGATCGCCTCAATATTA
Proteus mirabilis HI4320 PMI0672 -283 4.3 ATTTGAGATGGTGATCACGGTA
Position: -192
Score: 4.3
Sequence: TTTCGTGATGCCGCCCGCAAAA
Position: -129
Score: 4.3
Sequence: TTATGCAACACAGATCACATAA
Locus tag: Salmoneentericaenterica_010100005966
Salmoneentericaenterica_010100005966 -192 4.3 TTTCGTGATGCCGCCCGCAAAA
-129 4.3 TTATGCAACACAGATCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malE
Ortholog function: maltose ABC transporter periplasmic protein
Salmonella typhimurium LT2 STM4229 -192 4.3 TTTCGTGATGCCGCCCGCAAAA
-160 3.6 TTTTGTGTGCGCCAGCACGCAT
-158 3.8 TTGTGTGCGCCAGCACGCATTA
-129 4.3 TTATGCAACACAGATCACATAA
Citrobacter koseri ATCC BAA-895 CKO_03881 -193 3.7 TTTCGTGATGTCACCTGCAAAA
-159 3.9 TTATGTGCGCCAACACGCATTA
-130 4.3 TTATGCAACACAGATCACATAA
Position: -254
Score: 4.7
Sequence: TTATGTGATCTGTGTTGCATAA
Locus tag: Salmoneentericaenterica_010100005971
Salmoneentericaenterica_010100005971 -254 4.7 TTATGTGATCTGTGTTGCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malK
Ortholog function: maltose/maltodextrin transporter ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b4035 -254 4.4 TTGTGTGATCTCTGTTACAGAA
-225 3.9 TAATGTGGAGATGCGCACATAA
-191 3.7 TTTTGCAAGCAACATCACGAAA
Salmonella typhimurium LT2 STM4230 -254 4.7 TTATGTGATCTGTGTTGCATAA
-225 3.6 TAATGCGTGCTGGCGCACACAA
-223 3.8 ATGCGTGCTGGCGCACACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03880 -254 4.7 TTATGTGATCTGTGTTGCATAA
-225 3.7 TAATGCGTGTTGGCGCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04424 -254 4.5 TTGTGTGATCTCCATTGCAAAA
-225 3.7 TATTGCGTCCTGGAGCACAGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0457 -250 4 GGGTGTGATCTCTATTACAAAA
-221 3.8 AAGCGTGCCGTTGCCCACAAAA
-187 4.9 TTTTGCGATAAATATCACAATT
Position: -102
Score: 4.1
Sequence: GATTGCGAGGTTGCTCACAAAA
Locus tag: Salmoneentericaenterica_010100006256
Salmoneentericaenterica_010100006256 -102 4.1 GATTGCGAGGTTGCTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sbmC
Ortholog function: DNA gyrase inhibitor
Escherichia coli str. K-12 substr. MG1655 b2009 -93 3.5 GAGTGCGAGTCTGCTCGCATAA
Salmonella typhimurium LT2 STM2061 -102 4.1 GATTGCGAGGTTGCTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_00775 -219 3.5 GAGTGCGAGTCTGCTCACATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02467 -88 3.6 CTCTGTGAATTCGCGCACATAC
Enterobacter sp. 638 Ent638_2577 -97 3.6 TCGTGCGAGTCTGCTCGCATAA
-65 3.6 ATATTTGCTGCACATAAAGAAT
Position: -143
Score: 4.6
Sequence: AATTGTGATAGCGCTATCAAAT
Locus tag: Salmoneentericaenterica_010100006386
Salmoneentericaenterica_010100006386 -143 4.6 AATTGTGATAGCGCTATCAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_00488
Ortholog function: LacI-family transcriptional regulator
Salmonella typhimurium LT2 STM2345 -192 4 AGCTGCGATCGTTATCACAAAG
-143 4.6 AATTGTGATAGCGCTATCAAAT
Citrobacter koseri ATCC BAA-895 CKO_00488 -192 4.6 ATCTGTGATCATATTCACAAAG
-143 4.5 ATATGTGATAGCGCTATCAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01748 -155 4.2 AACTGTGATACACCTCCCAAAG
-53 3.6 AGTTATAATGCGATTCGCAGAT
Enterobacter sp. 638 Ent638_2847 -178 4.1 AGCTGCGATCAAGATCACAAAG
-129 4.6 AATTGTGATAGCGCTATCAAAT
Yersinia pestis KIM y1619 -208 5.4 TAATGTGATCTGGATCTCAATT
-158 4.6 ATTTGTGATAGCGCTATCATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3772 -246 4.5 TAATGTGATTAACATCCAAAAA
-196 4 AACTGTGACCGGCTTAGCACAA
Edwardsiella tarda EIB202 ETAE_3025 -210 4.3 TTTCGTGATAGCGCTATCATTT
Proteus mirabilis HI4320 PMI1778 -139 4.2 AATTGTGATAGCGCTATTATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1978 -195 3.8 GCTAGTGATATTAGTCACAAAT
-145 4.7 AATTGTGATAGCGCTATCATTT
Position: -315
Score: 3.6
Sequence: TATAGTGAACCTGATAAGGTAT
Position: -101
Score: 4
Sequence: TTATGTGCGCTACCTCACGCAC
Locus tag: Salmoneentericaenterica_010100006691
Salmoneentericaenterica_010100006691 -315 3.6 TATAGTGAACCTGATAAGGTAT
-101 4 TTATGTGCGCTACCTCACGCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: folE
Ortholog function: GTP cyclohydrolase I
Escherichia coli str. K-12 substr. MG1655 b2153 -101 3.8 TTATGTGCGCCGCCTCACGCAC
Salmonella typhimurium LT2 STM2193 -101 4 TTATGTGCGCTACCTCACGCAC
Citrobacter koseri ATCC BAA-895 CKO_00638 -98 3.8 TTATGTGCGCCGCCTCACGCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02591 -84 3.5 TTCTGTGCGCCACCTCACGCAC
Enterobacter sp. 638 Ent638_2753 -84 3.9 TTATGTGCGCCACCTCACGCAC
Serratia proteamaculans 568 Spro_1560 -121 4.3 AATCTTGACCGGGTTCACGTTA
Proteus mirabilis HI4320 PMI0639 -86 4.9 TAATGTGATTCAGCTCATCTAA
Position: -250
Score: 3.8
Sequence: TTTATTGATATTTATAATAAAT
Position: -161
Score: 4.9
Sequence: AATCGTGATACAGCGCACAAAT
Locus tag: Salmoneentericaenterica_010100006896
Salmoneentericaenterica_010100006896 -250 3.8 TTTATTGATATTTATAATAAAT
-161 4.9 AATCGTGATACAGCGCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yicG
Ortholog function: Putative inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b3646 -58 4.4 AATCGTGACAATGCGCACAAAT
Salmonella typhimurium LT2 STM3738 -210 3.7 TTAAATTATCTAAGTCAAAATA
-147 3.8 TTTATTGATATTTATAATAAAT
-58 4.9 AATCGTGATACAGCGCACAAAT
Citrobacter koseri ATCC BAA-895 CKO_05103 -58 4.7 AATCGTGATATTACGCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03994 -55 4.9 AATCGTGATCCTGCGCACAAAT
Enterobacter sp. 638 Ent638_0094 -55 3.9 AATCGTGATATGTTCTGCAAAA
Edwardsiella tarda EIB202 ETAE_0032 -180 3.8 AAAACTAATCTATATCAAATAT
Position: -262
Score: 4.6
Sequence: ATGTGTGATCTGGTGCACGCTT
Position: -211
Score: 4.1
Sequence: TTTTGTACGATCGTTCACACTT
Locus tag: Salmoneentericaenterica_010100006961
Salmoneentericaenterica_010100006961 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase subunit I
Escherichia coli str. K-12 substr. MG1655 b3739 -263 4.8 ATATGTGATCTGAAGCACGCTT
Salmonella typhimurium LT2 STM3872 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_00079 -262 4.7 ATATGTGATCCGAAGCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04144 -262 4.7 TTATGTGATCTGATGCACGCTT
Enterobacter sp. 638 Ent638_4125 -261 4.8 TTTTGTGATCTCGTGCACGCTT
Erwinia amylovora ATCC 49946 EAM_3481 -264 4.4 ATTTGTGATCGTGGACACGCTT
Yersinia pestis KIM y4142 -263 5.4 TTATGTGATGTATTTCACGTTT
Serratia proteamaculans 568 Spro_0001 -265 4.4 TATTGTGAGCAACTACACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4519 -254 5 TTATGTGAGTCACATCACAGAT
Edwardsiella tarda EIB202 ETAE_3526 -297 3.7 AATCGTGAAAATATTTAAATTA
Proteus mirabilis HI4320 PMI3057 -259 5 TTGTGTGTTCTAGATCACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0047 -265 5.7 TTATGTGATTTAAATCACATTT
Position: -204
Score: 3.6
Sequence: AAATGTGAGAGAGTGCAACCTG
Locus tag: Salmoneentericaenterica_010100007311
Salmoneentericaenterica_010100007311 -204 3.6 AAATGTGAGAGAGTGCAACCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: putP
Ortholog function: Proline/sodium symporter PutP (TC 2.A.21.2.1)
Escherichia coli str. K-12 substr. MG1655 b1015 -207 3.6 AAATGTGAGAGAGTGCAACCTG
Salmonella typhimurium LT2 STM1125 -204 3.6 AAATGTGAGAGAGTGCAACCTG
Citrobacter koseri ATCC BAA-895 CKO_02041 -80 3.6 AAATGTGAGAGAGTGCAACCTG
Enterobacter sp. 638 Ent638_1542 -249 3.7 TTTTATGCGGCACTTAACACTT
Serratia proteamaculans 568 Spro_2930 -211 3.9 AAATGTGACGCAGGGTAAACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4218 -130 3.7 TTGTGCAACCTTGTTAACAAAT
Proteus mirabilis HI4320 PMI1615 -220 3.8 TAGTGTGAAGTTACATACAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1958 -243 4.4 AAATGTGATTCAGTAAACGTTT
Position: -161
Score: 3.6
Sequence: AACTCTCATCCAGATCACGTTT
Position: -92
Score: 4
Sequence: TTTTGTGGCGTTAATCACGGTT
Locus tag: Salmoneentericaenterica_010100007356
Salmoneentericaenterica_010100007356 -161 3.6 AACTCTCATCCAGATCACGTTT
-92 4 TTTTGTGGCGTTAATCACGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lsrR
Ortholog function: LsrR, transcriptional repressor of lsr operon
Escherichia coli str. K-12 substr. MG1655 b1512 -87 4.1 AACTGTGGTTGCCATCACAGAT
Salmonella typhimurium LT2 STM4073 -161 3.6 AACTCTCATCCAGATCACGTTT
-92 4 TTTTGTGGCGTTAATCACGGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03508 -75 3.7 TTTTGCCAGTCGGCTCACACTT
Enterobacter sp. 638 Ent638_3537 -122 3.4 TTTATTGATTAGGATCCAATTC
Photorhabdus luminescens subsp. laumondii TTO1 plu3142 -137 4.3 AATTGTGATCTTGGCAATATTT
Position: -106
Score: 3.5
Sequence: GTTTGTGATCGTATTTGTAATT
Position: -75
Score: 3.6
Sequence: AAAATTGACAGCCGTCACTTTT
Position: 26
Score: 3.7
Sequence: TACCGTGATGGATCGCATCTAT
Locus tag: Salmoneentericaenterica_010100007698
Salmoneentericaenterica_010100007698 -106 3.5 GTTTGTGATCGTATTTGTAATT
-75 3.6 AAAATTGACAGCCGTCACTTTT
26 3.7 TACCGTGATGGATCGCATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yihV
Ortholog function: Fructokinase (EC 2.7.1.4); Sugar kinase YihV
Salmonella typhimurium LT2 STM4024.S -69 3.6 AAAATTGACAGCCGTCACTTTT
Position: -64
Score: 4.4
Sequence: TATCGTGAACTGCAACACACTT
Locus tag: Salmoneentericaenterica_010100007743
Salmoneentericaenterica_010100007743 -64 4.4 TATCGTGAACTGCAACACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiaJ
Ortholog function: Hypothetical transcriptional regulator yiaJ, IclR family
Escherichia coli str. K-12 substr. MG1655 b3574 -47 3.7 GATCGTGAACTACGGCACACTT
Salmonella typhimurium LT2 STM3667 -64 4.4 TATCGTGAACTGCAACACACTT
Citrobacter koseri ATCC BAA-895 CKO_05032 -63 3.8 GATCGTGAACTGAAACACACTT
Position: -187
Score: 4.5
Sequence: AAGTGTGTTGCAGTTCACGATA
Locus tag: Salmoneentericaenterica_010100007748
Salmoneentericaenterica_010100007748 -187 4.5 AAGTGTGTTGCAGTTCACGATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiaK
Ortholog function: 3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130)
Escherichia coli str. K-12 substr. MG1655 b3575 -175 4.1 AAGTGTGCCGTAGTTCACGATC
Salmonella typhimurium LT2 STM3668 -187 4.5 AAGTGTGTTGCAGTTCACGATA
Citrobacter koseri ATCC BAA-895 CKO_05033 -177 4.1 AAGTGTGTTTCAGTTCACGATC
Serratia proteamaculans 568 Spro_3933 -182 4.8 AAACGTGTTGTCGATCACAAAT
Position: -95
Score: 3.7
Sequence: ATTCGTGATTGCTGTCGTAAAG
Locus tag: Salmoneentericaenterica_010100007813
Salmoneentericaenterica_010100007813 -95 3.7 ATTCGTGATTGCTGTCGTAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: aldB
Ortholog function: Aldehyde dehydrogenase B (EC 1.2.1.22)
Escherichia coli str. K-12 substr. MG1655 b3588 -94 3.7 ATTCGTGATAGCTGTCGTAAAG
Salmonella typhimurium LT2 STM3680 -95 3.7 ATTCGTGATTGCTGTCGTAAAG
Citrobacter koseri ATCC BAA-895 CKO_05043 -94 3.6 TATCGTGACCGCAGTCGTAAAG
Enterobacter sp. 638 Ent638_0143 -93 3.4 ATCCGTGATTCCTGTCGTAAAG
Position: -154
Score: 4.2
Sequence: TTATGTGAAGCATTTCATAGAC
Locus tag: Salmoneentericaenterica_010100007848
Salmoneentericaenterica_010100007848 -154 4.2 TTATGTGAAGCATTTCATAGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhjE
Ortholog function: Inner membrane metabolite transport protein YhjE
Escherichia coli str. K-12 substr. MG1655 b3523 -155 4.5 TTATGTGAAGCATTTCATAGAA
Salmonella typhimurium LT2 STM3609 -154 4.2 TTATGTGAAGCATTTCATAGAC
Citrobacter koseri ATCC BAA-895 CKO_04963 -155 4 TTGTGTGAAGCATTTCATAGAC
-94 3.7 TTATTTGAGCGAAATCCCGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03874 -154 4.3 TTGTGTGAAGCATTTCATAGAA
Enterobacter sp. 638 Ent638_3920 -155 4.2 AACTGTGAAGCATTTCATAGAA
Erwinia amylovora ATCC 49946 EAM_3376 -134 3.6 AAATATGCCGTATTGAACATTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0769 -222 4.7 AATTGTGTGCGATCTCACATAT
Position: -329
Score: 3.6
Sequence: ATTTATGATACGTGGCTAAAAA
Locus tag: Salmoneentericaenterica_010100008058
Salmoneentericaenterica_010100008058 -329 3.6 ATTTATGATACGTGGCTAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfbV
Ortholog function: putative cytoplasmic protein
Escherichia coli str. K-12 substr. MG1655 b2295 -263 3.6 ATTTATGATTAACATCATGCAC
-54 4.1 AGTTGTGAATTTGCACAAATTT
Erwinia amylovora ATCC 49946 EAM_2300 -44 4 TTGTGTGTTTTTTTTAAAATTT
Edwardsiella tarda EIB202 ETAE_2396 -34 3.6 TTTTTTAACTCTTATCGAATAA
Proteus mirabilis HI4320 PMI1770 -290 3.7 ATTAATGATACGCATCATGCTT
-260 3.6 AAACTTGATGCTAATTATAGTT
Position: -144
Score: 5.3
Sequence: TATTGTGATGCACATCACTTTT
Locus tag: Salmoneentericaenterica_010100008083
Salmoneentericaenterica_010100008083 -144 5.3 TATTGTGATGCACATCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: udp
Ortholog function: Uridine phosphorylase (EC 2.4.2.3)
Escherichia coli str. K-12 substr. MG1655 b3831 -144 5.2 TTATGTGATTTGCATCACTTTT
-92 4.2 CATGGTGATGAGTATCACGAAA
Salmonella typhimurium LT2 STM3968 -144 5.1 TATTGTGATGAACATCACTTTT
-92 4.1 CATAGTGATGGCTGTCACGAAA
Citrobacter koseri ATCC BAA-895 CKO_00173 -143 5.2 TTATGTGATGTAAATCACTATT
-91 3.9 CATGGTGATGAGCGTCACGAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04327 -143 5.2 TAATGTGATGTGTATCACTATT
-91 4.1 CTTGGTGACTATCATCACAAAA
Enterobacter sp. 638 Ent638_3962 -143 4.7 TAGTGTGATGCATGTCACTATT
Erwinia amylovora ATCC 49946 EAM_0200 -143 4.6 AATTGCGACTTGTATCACCTTT
-90 4 ATTAAGGATGTTCATCACATAA
Yersinia pestis KIM y0444 -149 5.4 ATGTGTGATTTAAATCACAATT
-97 4 CAAGGTGACATAAATCACGAAA
Serratia proteamaculans 568 Spro_0244 -143 5.3 TTTTGTGACTTTAATCACAAAA
-125 3.7 AAAAGTTATGTAGATTGCATTC
-91 4.1 CATAGTGATGGTTGTCACGAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0185 -197 5.1 AAAAGTGATTTAAGTCACATTT
Edwardsiella tarda EIB202 ETAE_0143 -148 4.7 TATTGTGAAAATAATCACAGTT
Proteus mirabilis HI4320 PMI3532 -145 5.1 ATTTGTGATAACTATCACGTTT
-93 3.6 ACAGGTGACGTCAATCACTAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4417 -271 5.2 TTTTGTGATTTATATCTCAAAA
-219 4 TGAAGTGACATTTATCACTAAA
Position: -56
Score: 4.1
Sequence: TTTTTTGAGCGGAATCGCGTTA
Locus tag: Salmoneentericaenterica_010100008338
Salmoneentericaenterica_010100008338 -56 4.1 TTTTTTGAGCGGAATCGCGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yidA
Ortholog function: Phosphatase YidA
Escherichia coli str. K-12 substr. MG1655 b3697 -56 4.1 ATTTTTGAGCGGAATCGCGTTA
Salmonella typhimurium LT2 STM3831 -56 4.1 TTTTTTGAGCGGAATCGCGTTA
Citrobacter koseri ATCC BAA-895 CKO_00044 -56 4.1 TTTTTTGAGCGGAATCGCGTTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04101 -56 4.1 TTTTTTGAGCGGAATCGCGTTA
Position: -153
Score: 3.5
Sequence: GTTTGTGAGGTTATTAGCGAAA
Position: -125
Score: 3.3
Sequence: ATTCGTGATCCGTTTGTTGTTT
Locus tag: Salmoneentericaenterica_010100008588
Salmoneentericaenterica_010100008588 -153 3.5 GTTTGTGAGGTTATTAGCGAAA
-125 3.3 ATTCGTGATCCGTTTGTTGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpdA
Ortholog function: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Escherichia coli str. K-12 substr. MG1655 b0116 -224 3.3 AATTGTTAACAATTTTGTAAAA
Salmonella typhimurium LT2 STM0154 -153 3.5 GTTTGTGAGGTTATTAGCGAAA
Citrobacter koseri ATCC BAA-895 CKO_03256 -95 3.3 AATTGTTAACAATTTTGTAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00120 -105 3.3 AATTGTTAACAATTTTGTAAAA
Yersinia pestis KIM y0769 -253 3.3 ATTGGTGATCTTGTTATTACTG
Serratia proteamaculans 568 Spro_4009 -246 3.6 TATGGTGATGTAATGAAAAAAG
Proteus mirabilis HI4320 PMI2044 -133 3.4 GGTTGTGAGATCTGTCATGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu3621 -131 3.9 TGTTGCGAGTTCTGTCACGTTA
Position: -99
Score: 4.4
Sequence: TACTTTGAGCCGGTTCACACTT
Locus tag: Salmoneentericaenterica_010100008692
Salmoneentericaenterica_010100008692 -99 4.4 TACTTTGAGCCGGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: deaD
Ortholog function: ATP-independent RNA helicase
Salmonella typhimurium LT2 STM3280.S -154 3.9 CTTTTTGATTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_04559 -103 3.9 CTTTTTGATTGCCATCACCTTC
-48 4.4 TACTTTGAGCCGGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03570 -154 3.8 TTTTTTGCTTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACAT
Enterobacter sp. 638 Ent638_3599 -154 4.1 TCTTATGATTGCCATCACCTTA
-99 4.4 TACTTTGAGCCGGTTCACACTT
Erwinia amylovora ATCC 49946 EAM_3065 -99 4.8 TAATTTGAGCCGGTTCACACTT
Yersinia pestis KIM y0696 -96 4.8 TAATTTGAGCCGGTTCACACTT
Serratia proteamaculans 568 Spro_0495 -96 4.8 TAATTTGAGCCGGTTCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0718 -96 4.4 CAATTTGAGCCGGTTCACACTT
Edwardsiella tarda EIB202 ETAE_0411 -96 4.8 TAATTTGAGCCGGTTCACACTT
Proteus mirabilis HI4320 PMI3424 -80 5 TAATTTGAGCCAGTTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4523 -95 5 TAATTTGAGCCAGTTCACATTT
Position: -177
Score: 4.8
Sequence: TTTAGTGATTATAATCACAAAA
Locus tag: Salmoneentericaenterica_010100009460
Salmoneentericaenterica_010100009460 -177 4.8 TTTAGTGATTATAATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagE
Ortholog function: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b0679 -176 4.4 TTTGGTGACAAAACTCACAAAA
-142 4.2 ATTTGCGATACGAATTAAATTT
Salmonella typhimurium LT2 STM0685 -177 4.8 TTTAGTGATTATAATCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_02485 -181 4.9 TTTGGTGATTCAAATCACAAAA
-147 3.6 ATTTGCGATACGAATTAATTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00700 -153 4.7 TTTGGTGATAATTATCACAAAA
-119 3.6 ATTTGCGATACGAATTAATTTT
Erwinia amylovora ATCC 49946 EAM_1148 -161 4.8 TAAGGTGACTTTAATCACATAT
Serratia proteamaculans 568 Spro_1228 -162 5.1 TTTGGTGATGTAAATCACAAAA
-44 3.9 AAATATGATAAAGCTCATTAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1318 -200 3.7 AAATTTGAACCCGTTTACTATT
-132 3.9 TATCGCTACAGTGATCACAATT
Position: -171
Score: 4.7
Sequence: TTTTGTGATTATAATCACTAAA
Locus tag: Salmoneentericaenterica_010100009465
Salmoneentericaenterica_010100009465 -171 4.7 TTTTGTGATTATAATCACTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Escherichia coli str. K-12 substr. MG1655 b0678 -212 4.3 AAATTTAATTCGTATCGCAAAT
-178 4.6 TTTTGTGAGTTTTGTCACCAAA
Salmonella typhimurium LT2 STM0684 -205 3.7 AAAATTAATTCGCCTCGCAAAT
-171 4.7 TTTTGTGATTATAATCACTAAA
Citrobacter koseri ATCC BAA-895 CKO_02486 -218 3.8 AAAATTAATTCGTATCGCAAAT
-184 5.2 TTTTGTGATTTGAATCACCAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00699 -217 3.8 AAAATTAATTCGTATCGCAAAT
-183 5 TTTTGTGATAATTATCACCAAA
Enterobacter sp. 638 Ent638_1193 -218 3.8 AAAATTAATTCGTATCGCAAAT
-184 4.6 TTTTGTGAGTTTTGTCACCAAA
Erwinia amylovora ATCC 49946 EAM_1147 -195 4.9 ATATGTGATTAAAGTCACCTTA
Yersinia pestis KIM y1202 -214 5.1 TTTTGTGATAAATATCACCAAA
Serratia proteamaculans 568 Spro_1227 -194 5.3 TTTTGTGATTTACATCACCAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1326 -180 5 TTATGTGATAAAAATCACCAAA
Edwardsiella tarda EIB202 ETAE_2617 -190 5 ATTTGTGATAACTATCACCAAT
Proteus mirabilis HI4320 PMI0454 -217 4.9 ATTTGTGATTAAAGTCACCTAT
Position: -113
Score: 4.4
Sequence: TTTAGTGAAGCAGATCGCACTA
Locus tag: Salmoneentericaenterica_010100009490
Salmoneentericaenterica_010100009490 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanA
Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3)
Escherichia coli str. K-12 substr. MG1655 b3225 -115 4.6 TTTAGTGAAGCAGATCGCATTA
Salmonella typhimurium LT2 STM3339 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Citrobacter koseri ATCC BAA-895 CKO_04629 -116 4.2 TTTAGTGAAGTAGATCGCACTC
Enterobacter sp. 638 Ent638_3661 -112 4.6 TTTAGTGAAGCAGATCGCATTA
Edwardsiella tarda EIB202 ETAE_1381 -141 4.5 TTTAGTGAACTAGATCGCACAA
Position: -82
Score: 3.9
Sequence: ATTTGTTACATGAATCATTTAA
Position: -60
Score: 3.6
Sequence: ATGTGTGAAGCGTAGCATTTTA
Locus tag: Salmoneentericaenterica_010100009565
Salmoneentericaenterica_010100009565 -82 3.9 ATTTGTTACATGAATCATTTAA
-60 3.6 ATGTGTGAAGCGTAGCATTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: elbB
Ortholog function: sigma cross-reacting protein 27A (SCRP-27A)
Escherichia coli str. K-12 substr. MG1655 b3209 -91 3.7 ATTTGTTACATGAATCAGTTAA
-69 4 ATGTGTGATGCGTACCATTTTT
Salmonella typhimurium LT2 STM3327 -91 3.9 ATTTGTTACATGAATCATTTAA
-69 3.6 ATGTGTGAAGCGTAGCATTTTA
Citrobacter koseri ATCC BAA-895 CKO_04612 -92 3.7 TTTTGTTACATGAATCAGTTAA
-70 3.6 ATGTGTGAAGCGCAGCATTTTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03618 -93 3.6 ATTTGTTACATGAATCAGTAAA
-71 3.8 ATATGTGAAGCATAGCGAGTTA
Serratia proteamaculans 568 Spro_4341 -72 3.7 ATGTGTGATGTAGATTAGTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0316 -72 3.7 ATGTGTGATGTAGATTAGTGTT
Proteus mirabilis HI4320 PMI3679 -174 4.1 TTTTTTGATTATCATTACATAG
Position: -105
Score: 4
Sequence: AATTGCGATCCAGAGCAATTTT
Locus tag: Salmoneentericaenterica_010100009780
Salmoneentericaenterica_010100009780 -105 4 AATTGCGATCCAGAGCAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aer
Ortholog function: aerotaxis sensor receptor, senses cellular redox state or proton motive force
Escherichia coli str. K-12 substr. MG1655 b3072 -104 5 AATTGCGATCTAAATCAAATTA
Salmonella typhimurium LT2 STM3217 -220 3.6 AAAGGTGAGCCAGGGCAGATTT
-105 4 AATTGCGATCCAGAGCAATTTT
Citrobacter koseri ATCC BAA-895 CKO_04485 -290 3.9 ATTGGTGATGTTTTGCGCAATG
-105 5 AATTGCGATCTAAATCAAATTT
Enterobacter sp. 638 Ent638_3527 -106 4.5 AATTGCGATCTGGATCAATTTT
Position: -113
Score: 4.3
Sequence: TTTTTTGAATCCCATCACAATC
Locus tag: Salmoneentericaenterica_010100009790
Salmoneentericaenterica_010100009790 -113 4.3 TTTTTTGAATCCCATCACAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadH
Ortholog function: 2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase)
Escherichia coli str. K-12 substr. MG1655 b3081 -112 3.9 CTTTTTGAATCCCATCACAAAC
Salmonella typhimurium LT2 STM3219 -113 4.3 TTTTTTGAATCCCATCACAATC
Citrobacter koseri ATCC BAA-895 CKO_04487 -113 4.3 TTTTTTGAATCCCATCACAATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03510 -111 3.9 TTCTTTGAATCCCATCACAATC
Enterobacter sp. 638 Ent638_3539 -111 3.9 ATCTTTGAATCCCATCACATTC
Erwinia amylovora ATCC 49946 EAM_0507 -169 3.8 AACCGTGACTGAGATCGCTAAA
Yersinia pestis KIM y3589 -131 4 ATTCATGACGGCTATCACAATC
Serratia proteamaculans 568 Spro_4309 -126 4.2 ATTCATGACATCTATCACATTC
Proteus mirabilis HI4320 PMI3702 -213 3.8 TATTATTATATGATTAAAAAAT
-103 3.8 TTCCATGATTAAGATCACAACT
Photorhabdus luminescens subsp. laumondii TTO1 plu3990 -161 4.3 TTTCATGACCTTCATCACATTC
Position: -92
Score: 4.5
Sequence: CTTTGTGATAAAACTCACTTTT
Locus tag: Salmoneentericaenterica_010100010317
Salmoneentericaenterica_010100010317 -92 4.5 CTTTGTGATAAAACTCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqeF
Ortholog function: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Escherichia coli str. K-12 substr. MG1655 b2844 -91 4.6 CTTTGTGATAAAAATCACTTTT
Salmonella typhimurium LT2 STM3019 -92 4.5 CTTTGTGATAAAACTCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_04222 -92 4.6 CTTTGTGATAAAACTCACCATT
Position: -116
Score: 3.9
Sequence: TTCTGTGATGAAGATCTATATT
Locus tag: Salmoneentericaenterica_010100010487
Salmoneentericaenterica_010100010487 -116 3.9 TTCTGTGATGAAGATCTATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glk
Ortholog function: glucokinase
Escherichia coli str. K-12 substr. MG1655 b2388 -116 4.1 TTGTGTGACCCAGATCGATATT
Salmonella typhimurium LT2 STM2403 -116 3.9 TTCTGTGATGAAGATCTATATT
Citrobacter koseri ATCC BAA-895 CKO_00412 -116 4.5 TTATGTGATGCAGATCGATATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02738 -117 4.4 AAATGTGACCTGTGTCGCTAAA
Enterobacter sp. 638 Ent638_2921 -116 3.8 TTCTGTGACGAAGATCGATTAT
Yersinia pestis KIM y1505 -113 4.7 TTATGAGATGTCAGTCACAAAA
Serratia proteamaculans 568 Spro_3407 -116 4.8 TTTTGTGATCCGGATCGCTAAT
Position: -109
Score: 3.9
Sequence: AATATAGATCTTCATCACAGAA
Locus tag: Salmoneentericaenterica_010100010492
Salmoneentericaenterica_010100010492 -109 3.9 AATATAGATCTTCATCACAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfeO
Ortholog function: Chloride channel protein
Escherichia coli str. K-12 substr. MG1655 b2389 -109 4.1 AATATCGATCTGGGTCACACAA
Salmonella typhimurium LT2 STM2404 -109 3.9 AATATAGATCTTCATCACAGAA
Citrobacter koseri ATCC BAA-895 CKO_00411 -134 4.4 AATATCGATCTGCATCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02739 -192 4.3 TTTAGCGACACAGGTCACATTT
Enterobacter sp. 638 Ent638_2922 -111 3.7 ATAATCGATCTTCGTCACAGAA
Serratia proteamaculans 568 Spro_3408 -249 4.7 ATTAGCGATCCGGATCACAAAA
Position: -133
Score: 3.7
Sequence: AAGTGTATTACAGATCACTAAT
Position: -84
Score: 3.8
Sequence: TAGTGTGTGTTGGATCTCGTTT
Locus tag: Salmoneentericaenterica_010100010522
Salmoneentericaenterica_010100010522 -133 3.7 AAGTGTATTACAGATCACTAAT
-84 3.8 TAGTGTGTGTTGGATCTCGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nupC
Ortholog function: Nucleoside permease NupC
Salmonella typhimurium LT2 STM2409 -133 3.7 AAGTGTATTACAGATCACTAAT
-84 3.8 TAGTGTGTGTTGGATCTCGTTT
Citrobacter koseri ATCC BAA-895 CKO_00402 -133 3.7 AAACGTATTCCAGATCACTAAT
-114 4 AATTTTGAATCTCATCACAGCT
-84 3.7 TAGTGTGTGTTTGATCTCGTTT
Enterobacter sp. 638 Ent638_2927 -189 4.7 TTTTGTGAAGCGTAGCACACAA
-133 3.6 AAATGTATGGTTGATCACTATT
-84 4.1 TAGTGTGGTCTTGATCTCGTTT
Position: -108
Score: 4.2
Sequence: ATTTGTGATCGTCGCCGCGTTT
Locus tag: Salmoneentericaenterica_010100010626
Salmoneentericaenterica_010100010626 -108 4.2 ATTTGTGATCGTCGCCGCGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treB
Ortholog function: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b4240 -101 3.8 AATTGTGATCTTCGCTGCGTTT
Citrobacter koseri ATCC BAA-895 CKO_03571 -156 3.8 ATTTGTGATCTTCGCTGCGTTT
Enterobacter sp. 638 Ent638_0439 -106 4 TATTGTGATCTTCACCCGATTT
Serratia proteamaculans 568 Spro_0529 -124 3.8 TTTTGTGATCCTCGCCCCAAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu3288 -127 4.3 CAATGTGATCTTCAACCCATTT
Position: -238
Score: 4.8
Sequence: AAATGTAATACCCATCACACTT
Position: -171
Score: 3.8
Sequence: TGCCGCGATAGATCTCACACTT
Position: -120
Score: 4.1
Sequence: TTCTGTGGCGCAGATCACCTAT
Locus tag: Salmoneentericaenterica_010100010696
Salmoneentericaenterica_010100010696 -238 4.8 AAATGTAATACCCATCACACTT
-171 3.8 TGCCGCGATAGATCTCACACTT
-120 4.1 TTCTGTGGCGCAGATCACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_03591
Ortholog function: hypothetical protein
Salmonella typhimurium LT2 STM4440 -229 4.5 AACTGTAATACCCATCACACTT
-162 3.8 TGCCGCGATAGATCTCACACTT
-111 4.1 TTCTGTGGCGCAGATCACCTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04633 -172 4.3 TGTTGTGATACATCTCACGCCA
-121 4.2 ATATGTGGAGTCGATCACCTAA
Enterobacter sp. 638 Ent638_0424 -265 3.8 AAACCTTATCCGCGTCACACTT
-189 4.6 TAGCGTGATATTCATCACGCAA
Erwinia amylovora ATCC 49946 EAM_0469 -156 3.8 TGATGTGAGTTGTCTCGCTTTG
Position: -300
Score: 4.2
Sequence: TATCGTGACCTGTGTCACTGTT
Locus tag: Salmoneentericaenterica_010100010736
Salmoneentericaenterica_010100010736 -300 4.2 TATCGTGACCTGTGTCACTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Enterobacter sp. 638 Ent638_1222 -295 4.2 TATCGTGACTGTGATCACTGTT
Erwinia amylovora ATCC 49946 EAM_1168 -249 4.4 AAGTGTGATTTTTGTCACTGTT
-190 3.6 TAATGAGATTGTGATCCACTTA
Yersinia pestis KIM y3071 -254 4.5 AATCGTGATCCTAATCACTGTT
Serratia proteamaculans 568 Spro_1263 -253 4.3 ATCCGTGATCTAAATCACTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1357 -265 4.7 ATTCGTGATCTAAATCACTGTT
Edwardsiella tarda EIB202 ETAE_2588 -261 3.7 ATGCGTGACCGTTGTCACTGTT
Proteus mirabilis HI4320 PMI0565 -264 4.3 AAAAGTGATCCCTCTCACTGTT
Position: -181
Score: 4
Sequence: TAGCGTTAACTGCTTCAAATTT
Locus tag: Salmoneentericaenterica_010100010821
Salmoneentericaenterica_010100010821 -181 4 TAGCGTTAACTGCTTCAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cspD
Ortholog function: cold shock-like protein
Escherichia coli str. K-12 substr. MG1655 b0880 -180 4 TAGCGTTAACTGCTTCAAATTT
Salmonella typhimurium LT2 STM0943 -181 4 TAGCGTTAACTGCTTCAAATTT
Citrobacter koseri ATCC BAA-895 CKO_02200 -210 3.9 ATCCGCGACATCTGTCACATTA
-181 4 TAGCGTTAACTGCTTCAAATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00913 -270 4.2 AGAGGTTATGCTCATCACAAAT
-180 4 TAGCGTTAACTGCTTCAAATTT
Enterobacter sp. 638 Ent638_1397 -209 3.8 ATCCGCGATATCTGTCACATTC
-180 3.9 TAGCGTTAACTGCTTCAAAAAT
Serratia proteamaculans 568 Spro_1672 -205 4 TAGCGTTACCTGCTTCAAACTT
-49 3.9 TTCAGTTATTCATCTCACCTAA
Proteus mirabilis HI4320 PMI0688 -163 3.8 AAGCGTTAGCTACATCAAAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1592 -194 4.6 TATCGTTATCTATATCAAACTT
Position: -76
Score: 3.4
Sequence: GAATTTGATTTACATCAATAAG
Locus tag: Salmoneentericaenterica_010100010881
Salmoneentericaenterica_010100010881 -76 3.4 GAATTTGATTTACATCAATAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirB
Ortholog function: nitrite reductase (NAD(P)H) subunit
Escherichia coli str. K-12 substr. MG1655 b3365 -124 3.2 AAAATTTATACAAATCAGCAAT
-76 3.4 GAATTTGATTTACATCAATAAG
Salmonella typhimurium LT2 STM3474 -76 3.4 GAATTTGATTTACATCAATAAG
Citrobacter koseri ATCC BAA-895 CKO_04789 -76 3.4 GAATTTGATTTACATCAATAAG
Enterobacter sp. 638 Ent638_3793 -76 3.3 GTATTTGATTTGCATCAATAAG
Yersinia pestis KIM y3945 -75 3.7 CAAATTGATTTACATCAAGAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4079 -186 4.2 AAGCGTGCTATAGATCTCACTT
Proteus mirabilis HI4320 PMI1479 -129 3.5 TTTTGTGCACTTTATTAACAAT
Position: -137
Score: 5
Sequence: TGATGTGACAAACATCACATTA
Locus tag: Salmoneentericaenterica_010100010886
Salmoneentericaenterica_010100010886 -137 5 TGATGTGACAAACATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhfC
Ortholog function: Predicted purine nucleoside transporter, MFS superfamily
Salmonella typhimurium LT2 STM3473 -137 5 TGATGTGACAAACATCACATTA
-84 3.8 ATTATTTAAATGCATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03750 -140 5.3 AAGCGTGATGCAGATCACATTA
-109 3.7 AAAGATAACCCATTTCACAATA
Enterobacter sp. 638 Ent638_3791 -206 4.8 AAAAGTGACTTAGATCACATTG
Serratia proteamaculans 568 Spro_2681 -82 4.3 AATTGTGAACCCGATCACTTCA
Position: -214
Score: 4.4
Sequence: TTTTGTGATGTATTTAAATAAT
Position: -161
Score: 5.1
Sequence: TAATGTGATGTTTGTCACATCA
Locus tag: Salmoneentericaenterica_010100010891
Salmoneentericaenterica_010100010891 -214 4.4 TTTTGTGATGTATTTAAATAAT
-161 5.1 TAATGTGATGTTTGTCACATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppiA
Ortholog function: Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b3363 -204 4.2 TTTTGTGATCTGTTTAAATGTT
-151 4.2 AGAGGTGATTTTGATCACGGAA
Salmonella typhimurium LT2 STM3472 -214 4.3 TTTTGTGATGCATTTAAATAAT
-161 5.1 TAATGTGATGTTTGTCACATCA
Citrobacter koseri ATCC BAA-895 CKO_04785 -215 3.7 TTTAGTGATGTATTTAAATGTT
-162 5.2 TAACGTGACATTGATCACATTA
Position: -54
Score: 3.5
Sequence: AACCGTGCGGTATGTCGCACAA
Locus tag: Salmoneentericaenterica_010100010996
Salmoneentericaenterica_010100010996 -54 3.5 AACCGTGCGGTATGTCGCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nudE
Ortholog function: ADP compounds hydrolase NudE (EC 3.6.1.-)
Escherichia coli str. K-12 substr. MG1655 b3397 -53 3.7 AAGCGTGTCCGATATCGCACAA
Citrobacter koseri ATCC BAA-895 CKO_04820 -54 4.1 AACCGTGCTGTATATCGCACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03768 -54 4 AAGCGTGTTGCGTATCGCACAA
Enterobacter sp. 638 Ent638_3810 -55 3.6 AACCGTGCGTCATATCGCACAA
Yersinia pestis KIM y3923 -247 4.5 CAATGTGATCAAGTTCTAATAT
Serratia proteamaculans 568 Spro_4612 -135 4.4 CAATGTGATCAAGATCGGATTT
Edwardsiella tarda EIB202 ETAE_3268 -116 3.6 AAATATGAGCATCTGCGCACAA
Position: -290
Score: 3.5
Sequence: TTGTGCGACATACCGCACGGTT
Position: -238
Score: 3.6
Sequence: TTATGTAACGTAATAAAAATTA
Locus tag: Salmoneentericaenterica_010100011001
Salmoneentericaenterica_010100011001 -290 3.5 TTGTGCGACATACCGCACGGTT
-238 3.6 TTATGTAACGTAATAAAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: igaA
Ortholog function: IgaA: a membrane protein that prevents overactivation of the Rcs regulatory system
Escherichia coli str. K-12 substr. MG1655 b3398 -288 3.6 TTGTGCGATATCGGACACGCTT
-123 3.8 TACTGTGATGTGCTTAATGATG
Salmonella typhimurium LT2 STM3495 -238 3.6 TTATGTAACGTAATAAAAATTA
Citrobacter koseri ATCC BAA-895 CKO_04821 -290 3.9 TTGTGCGATATACAGCACGGTT
-238 3.7 TTATGTAACGTAGTAAAAATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03769 -282 3.8 TTGTGCGATACGCAACACGCTT
Enterobacter sp. 638 Ent638_3811 -287 3.7 TTGTGCGATATGACGCACGGTT
Yersinia pestis KIM y3922 -186 3.7 TATTGTGACTGCGTTAGCTTTG
Position: -114
Score: 4.3
Sequence: TAACGCGATATTTATCACTTTT
Locus tag: Salmoneentericaenterica_010100011106
Salmoneentericaenterica_010100011106 -114 4.3 TAACGCGATATTTATCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cspE
Ortholog function: cold shock protein E
Escherichia coli str. K-12 substr. MG1655 b0623 -114 4 TAACGCGACTTTTATCACTTTT
Salmonella typhimurium LT2 STM0629 -114 4.3 TAACGCGATATTTATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_02534 -21 4.3 TAACGCGATATTTATCACTTTT
Enterobacter sp. 638 Ent638_1159 -114 3.8 TAACGCGACTTTTGTCACTTTT
Erwinia amylovora ATCC 49946 EAM_1116 -113 3.6 AAAAACGATATTTATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1294 -113 3.9 TTTAGCGACTTTTATCACTTTT
Position: -103
Score: 5.3
Sequence: AAATGTGACTAATATCACATTA
Locus tag: Salmoneentericaenterica_010100011381
Salmoneentericaenterica_010100011381 -103 5.3 AAATGTGACTAATATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: b1963
Ortholog function: orf, hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1963 -287 4.6 TGGTGTGATCAGGCGCACATTA
Salmonella typhimurium LT2 STM1994 -70 5.5 AAATGTGATTAATATCACATTA
-34 4.4 TCATATGACTTACATCACAAAA
Position: -1
Score: 3.4
Sequence: AATGGCTATCGAAATCAAAGTA
Locus tag: Salmoneentericaenterica_010100011442
Salmoneentericaenterica_010100011442 -1 3.4 AATGGCTATCGAAATCAAAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceF
Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Escherichia coli str. K-12 substr. MG1655 b0115 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0153 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03258 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00119 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0661 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0748 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0768 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4010 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3788 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0660 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2045 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -54
Score: 3.4
Sequence: TAATGGGACAGGTTCCAGATAA
Locus tag: Salmoneentericaenterica_010100011452
Salmoneentericaenterica_010100011452 -54 3.4 TAATGGGACAGGTTCCAGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Escherichia coli str. K-12 substr. MG1655 b0114 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0152 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03259 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0660 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0747 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0767 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4011 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0659 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2046 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -302
Score: 3.4
Sequence: TAATTTGTTTTTATTCATTATT
Position: -157
Score: 4
Sequence: AAACGTGATTTCTGTAAAATTG
Position: -120
Score: 3.2
Sequence: TTTACTGATTTCAATCAAAACC
Locus tag: Salmoneentericaenterica_010100011457
Salmoneentericaenterica_010100011457 -302 3.4 TAATTTGTTTTTATTCATTATT
-157 4 AAACGTGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pdhR
Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex
Escherichia coli str. K-12 substr. MG1655 b0113 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0151 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03260 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00117 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0659 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0746 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0766 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4012 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3790 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0658 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2047 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -174
Score: 3.8
Sequence: GGGTGTTATCTGCCTCACAGTT
Locus tag: Salmoneentericaenterica_010100011467
Salmoneentericaenterica_010100011467 -174 3.8 GGGTGTTATCTGCCTCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araT
Ortholog function: putative permease of the Na+:galactoside symporter family
Salmonella typhimurium LT2 STM0149 -127 3.8 GGGTGTTATCTGCCTCACAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00115 -171 4.7 CATTGTTATCTGCTTCACACTT
Position: -149
Score: 5.7
Sequence: TTTTGTGATATAGTTCACAAAA
Locus tag: Salmoneentericaenterica_010100011783
Salmoneentericaenterica_010100011783 -149 5.7 TTTTGTGATATAGTTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjcB
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b4060 -149 5.7 AATTGTGATATAGTTCACAAAA
Salmonella typhimurium LT2 STM4263 -149 5.7 TTTTGTGATATAGTTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03830 -150 5.7 TATTGTGATATAGTTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04460 -143 5.4 AAGTGTGATATAGTTCACACAA
Enterobacter sp. 638 Ent638_0263 -82 5.3 AAACGTGATATAGTTCACACAT
Serratia proteamaculans 568 Spro_2355 -81 5 CAATGTGACGCAGATCACACTA
Position: -147
Score: 5.3
Sequence: ATGTGTGATCGTCATCACAAAA
Locus tag: Salmoneentericaenterica_010100011973
Salmoneentericaenterica_010100011973 -147 5.3 ATGTGTGATCGTCATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hpt
Ortholog function: hypoxanthine phosphoribosyltransferase
Escherichia coli str. K-12 substr. MG1655 b0125 -147 5.3 ATGTGTGATCGTCATCACAATT
Salmonella typhimurium LT2 STM0170 -147 5.3 ATGTGTGATCGTCATCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03242 -135 5.3 AAGTGTGATCGTCATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00133 -134 5.4 AAGTGTGATCGGAATCACAAAT
Enterobacter sp. 638 Ent638_0673 -180 3.6 AATTTTGATAGCAATTAATTAT
-148 5.4 AAGTGTGATCGGAATCACAAAT
Proteus mirabilis HI4320 PMI0160 -154 3.6 TACTGTAATAAGTAACAAAATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0860 -144 4 AATTCTGATATGCTTTGCAAAA
Position: -306
Score: 3.7
Sequence: TTTCCTGATTTATTGCTCAATT
Position: -251
Score: 4.8
Sequence: AAATGTGCTCTGGCTCTCAAAA
Position: -124
Score: 4.5
Sequence: TGCTGTGATGAATTTCGCATAA
Position: 0
Score: 4
Sequence: ATGTTTGATAAACGTCACCGTA
Locus tag: Salmoneentericaenterica_010100012043
Salmoneentericaenterica_010100012043 -306 3.7 TTTCCTGATTTATTGCTCAATT
-251 4.8 AAATGTGCTCTGGCTCTCAAAA
-124 4.5 TGCTGTGATGAATTTCGCATAA
0 4 ATGTTTGATAAACGTCACCGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylR
Ortholog function: Xylose activator XylR (AraC family)
Escherichia coli str. K-12 substr. MG1655 b3569 -253 4.2 AAGTGTGCGCTCGCTCGCAAAA
-163 3.7 AAGTAAGATCTCGGTCATAAAT
Salmonella typhimurium LT2 STM3662 -251 4.8 AAATGTGCTCTGGCTCTCAAAA
-124 4.5 TGCTGTGATGAATTTCGCATAA
Citrobacter koseri ATCC BAA-895 CKO_05026 -254 4.1 AAGTGTGCGCCGCCTCGCAAAA
-162 3.8 AAGTACGATCTCGGTCATAATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03933 -234 3.8 AAATACGATCGCCGTCATAATT
Enterobacter sp. 638 Ent638_0152 -264 3.9 AAACGTGCGCTGGCTCCCAAAA
Yersinia pestis KIM y4053 -264 4.8 AATTGTGGTGTAGATCTCATAA
-160 4.2 AAACATGATCGTTATCATAAAA
Serratia proteamaculans 568 Spro_0102 -259 4.4 AAATGTGCGACAGATCTCATAA
-166 3.7 AAGCATGACCGCCATCATAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0101 -272 4.5 AAATATGACCCGCATCAAAAAA
Proteus mirabilis HI4320 PMI1276 -93 4.9 TTGTGTGATAGTAATCACATAG
Position: -260
Score: 3.9
Sequence: TTATGCGAAATTCATCACAGCA
Position: -133
Score: 4.4
Sequence: TTTTGAGAGCCAGAGCACATTT
Locus tag: Salmoneentericaenterica_010100012048
Salmoneentericaenterica_010100012048 -260 3.9 TTATGCGAAATTCATCACAGCA
-133 4.4 TTTTGAGAGCCAGAGCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylA
Ortholog function: Xylose isomerase (EC 5.3.1.5)
Escherichia coli str. K-12 substr. MG1655 b3565 -224 3.9 ATTTATGACCGAGATCTTACTT
-134 4.2 TTTTGCGAGCGAGCGCACACTT
Salmonella typhimurium LT2 STM3661 -260 3.9 TTATGCGAAATTCATCACAGCA
-133 4.4 TTTTGAGAGCCAGAGCACATTT
Citrobacter koseri ATCC BAA-895 CKO_05021 -214 4.1 AATTATGACCGAGATCGTACTT
-122 4.2 TTTTGCGAGGCGGCGCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03929 -234 4.1 TTTTGCGAGCTGGCGCACGTTT
Enterobacter sp. 638 Ent638_0156 -231 3.8 ATTTATGACCGTGATCTGATTT
-135 3.9 TTTTGGGAGCCAGCGCACGTTT
Yersinia pestis KIM y4057 -220 4.6 TTATGAGATCTACACCACAATT
Serratia proteamaculans 568 Spro_0098 -222 3.9 TTTTATGATGGCGGTCATGCTT
-129 4.6 TTATGAGATCTGTCGCACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0097 -223 4.7 TTTTTTGATGCGGGTCATATTT
-135 4.4 TTTTGCGACACAGCGCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2275 -251 4.6 ATTTATGAGATAAATCACACAA
Position: -21
Score: 3.8
Sequence: CTGTGTAATGGAAATCTCACTA
Locus tag: Salmoneentericaenterica_010100012203
Salmoneentericaenterica_010100012203 -21 3.8 CTGTGTAATGGAAATCTCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadR
Ortholog function: fatty acid metabolism regulator
Escherichia coli str. K-12 substr. MG1655 b1187 -21 3.9 CTGTGTTATGGAAATCTCACTA
Salmonella typhimurium LT2 STM1805 -21 3.8 CTGTGTAATGGAAATCTCACTA
Enterobacter sp. 638 Ent638_2365 -21 3.8 CTGTGTAATGGAAATCTCACTA
Yersinia pestis KIM y2177 -113 3.8 CTTTATGACTGCTTTCACCATT
Proteus mirabilis HI4320 PMI1510 -111 4.4 TTTTATGATGCCATTCACTATT
-84 3.8 ATGGTTGAGCTATATCAAAATT
Position: -55
Score: 5.3
Sequence: TTATGTGATCTAAATCACTTTT
Locus tag: Salmoneentericaenterica_010100012483
Salmoneentericaenterica_010100012483 -55 5.3 TTATGTGATCTAAATCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aaeR
Ortholog function: LysR-family transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b3243 -37 5.3 TTATGTGATCTAAATCACTTTT
Salmonella typhimurium LT2 STM3367 -37 5.3 TTATGTGATCTAAATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_04651 -37 5.3 ATATGTGATCTAAATCACTTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03652 -55 5.1 ATGTGTGATCTAAATCACTTTT
Enterobacter sp. 638 Ent638_3680 -37 5.3 ATATGTGATCTAAATCACTTTT
Erwinia amylovora ATCC 49946 EAM_3128 -37 5.3 AAATGTGATCTAAATCACTTTT
Yersinia pestis KIM y0180 -55 5.1 ATGTGTGATCTAAATCACTTTT
Serratia proteamaculans 568 Spro_4393 -37 4.9 ATCTGTGATCTAAATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0276 -37 5.1 TAGTGTGATCTAAATCACTTTT
Edwardsiella tarda EIB202 ETAE_3129 -131 4.5 ATCTGTGACGCAAATCACTTTT
Position: -92
Score: 4.2
Sequence: AAGTGTGATTTTCGTCCCCATA
Locus tag: Salmoneentericaenterica_010100012618
Salmoneentericaenterica_010100012618 -92 4.2 AAGTGTGATTTTCGTCCCCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybeD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0631 -94 3.6 AAGTGTAATTTCCGTCCCCATA
Salmonella typhimurium LT2 STM0636 -93 4.2 AAGTGTGATTTTCGTCCCCATA
-35 3.9 AGTTGTTATTTTTTTTACGTAA
Citrobacter koseri ATCC BAA-895 CKO_02527 -91 4.4 AAGTGTGATTTCCATCCCCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00663 -97 4.4 AAGTGTGATTTCCATCCCCATA
Enterobacter sp. 638 Ent638_1166 -90 4.4 AAGTGTGATTTCCATCCCCATA
Yersinia pestis KIM y1174 -146 4.2 TATTGTGATTAATCTTATATTG
Position: -182
Score: 4.3
Sequence: GAACGTGATAGCGTTCACAGTT
Position: -147
Score: 4
Sequence: CGGTGTGATGTCGTCCGCATTT
Position: -62
Score: 3.8
Sequence: TAAGGTGAGGCCGATAACCCTT
Locus tag: Salmoneentericaenterica_010100012693
Salmoneentericaenterica_010100012693 -182 4.3 GAACGTGATAGCGTTCACAGTT
-147 4 CGGTGTGATGTCGTCCGCATTT
-62 3.8 TAAGGTGAGGCCGATAACCCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaS
Ortholog function: L-rhamnose operon regulatory protein RhaS
Escherichia coli str. K-12 substr. MG1655 b3905 -182 4.5 GAACGTGATGATGTTCACAATT
-147 4.5 TGATGTGATGCTCACCGCATTT
Salmonella typhimurium LT2 STM4048 -182 4.3 GAACGTGATAGCGTTCACAGTT
-147 4 CGGTGTGATGTCGTCCGCATTT
-62 3.8 TAAGGTGAGGCCGATAACCCTT
Citrobacter koseri ATCC BAA-895 CKO_03099 -194 4.5 GAACGTGATAGCGTTCACAATT
-34 4.3 ATTTCTGACATGTTTCTCATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04214 -204 3.8 GACCGTGAGGGACATCACAGTT
Enterobacter sp. 638 Ent638_4066 -194 4.2 GAACGTGAGGGAGTTCACAGTT
Yersinia pestis KIM y0590 -214 3.9 GAAAGTGAAACAGCTCACAGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0441 -144 3.9 CGGTGTGATCCTTGCCACACTT
Position: -37
Score: 3.6
Sequence: AAAATTGATTTATTGCATCTAT
Locus tag: Salmoneentericaenterica_010100013008
Salmoneentericaenterica_010100013008 -37 3.6 AAAATTGATTTATTGCATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfeR
Ortholog function: transcriptional regulator, LysR family
Salmonella typhimurium LT2 STM2424 -37 3.6 AAAATTGATTTATTGCATCTAT
Citrobacter koseri ATCC BAA-895 CKO_00385 -37 3.6 AAAATTGATTTATTGCATCTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02755 -112 3.6 AAAATTGATTTATTGCATCTAT
Erwinia amylovora ATCC 49946 EAM_2384 -33 3.7 TTAATTTATTGAATTCATATAT
Serratia proteamaculans 568 Spro_3441 -33 3.6 TTGATTTATTTAATTCATATAT
Position: -71
Score: 3.9
Sequence: TTTTGTGGTATGGTTTAAACAT
Locus tag: Salmoneentericaenterica_010100013543
Salmoneentericaenterica_010100013543 -71 3.9 TTTTGTGGTATGGTTTAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroF
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Salmonella typhimurium LT2 STM2670 -71 3.9 TTTTGTGGTATGGTTTAAACAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02923 -159 3.8 TATTGTTATACGCATCGCGCCA
Edwardsiella tarda EIB202 ETAE_2837 -117 3.8 ATGTACGATATTGTTTACATAT
Proteus mirabilis HI4320 PMI0387 -214 4.5 TTATTTTATCTTAGTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1262 -262 3.6 TGTTTTGATATTGATTTTATTT
Position: -323
Score: 4.6
Sequence: TCATGTGAAGAGGATCACAAAA
Position: -279
Score: 5.1
Sequence: AAGTGTGAAATATCTCACATAA
Position: -206
Score: 5.2
Sequence: CTTTGTGATCAATATCACATAA
Position: -163
Score: 5.4
Sequence: TTATGTGACGCAAATCACATAA
Locus tag: Salmoneentericaenterica_010100014335
Salmoneentericaenterica_010100014335 -323 4.6 TCATGTGAAGAGGATCACAAAA
-279 5.1 AAGTGTGAAATATCTCACATAA
-206 5.2 CTTTGTGATCAATATCACATAA
-163 5.4 TTATGTGACGCAAATCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b3599 -206 4.5 TTTTGTGATGAACGTCACGTCA
-162 5.4 TTATGTGATTGATATCACACAA
-113 3.3 TTCAGTGCCAGATTTCGCAGTA
Salmonella typhimurium LT2 STM3685 -207 4.8 CTTTGTGATCAATATCACATCA
-163 5.4 TTATGTGACGCAAATCACATAA
Citrobacter koseri ATCC BAA-895 CKO_05054 -203 5.2 TTTTGTGATCAATATCACATCA
-159 5 TCATGTGATCCAAATCACACAA
-110 3.4 TTCAGTGCCAGATTTCGCACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03942 -208 4.9 TTTTGTGATCATCATCACTAAA
-164 5.2 TCATGTGATCCAAATCACATAA
-115 3.4 TTCAGTGCCAGATTTCGCACTA
Enterobacter sp. 638 Ent638_0136 -224 3.4 TATTTTTTTCATACTCTCATTT
-205 4.8 TTTTGTGATGGCGATCACCTCA
-161 5.1 TTGCGTGATGCAGATCACACAA
Erwinia amylovora ATCC 49946 EAM_3416 -229 3.3 CATTGCGAATATCTTTACACTT
-210 3.9 CTTCGTGACTCATGTCACTAAA
-166 4.8 TTAAGTGACCCGCATCACACTT
-95 3.2 CGTTTTGATCGTGATCCCTCAA
-34 3.5 ACATGAGATTTGCATCATTAAT
Yersinia pestis KIM y4087 -223 4.6 AGATGTGATCTTAATCAACAAA
-179 4.5 TTGTGTGACTTTCGTCACGAAA
Serratia proteamaculans 568 Spro_0072 -195 5.2 AAATGTGATGTATATCACTATA
-151 4.5 GTTGGTGATCTGCATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0087 -230 5.1 TTTTGTGAAGTAAATCACCTAT
-186 4.5 TTGTGTGATTTTTGTCACGTTG
Position: -131
Score: 3.8
Sequence: ATATTTGCACAGCGTCACACTT
Locus tag: Salmoneentericaenterica_010100014405
Salmoneentericaenterica_010100014405 -131 3.8 ATATTTGCACAGCGTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: L-ribulokinase
Escherichia coli str. K-12 substr. MG1655 b0063 -131 3.9 TTATTTGCACGGCGTCACACTT
Salmonella typhimurium LT2 STM0103 -131 3.8 ATATTTGCACAGCGTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_03319 -132 3.9 ATATTTGCACGGCGTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00062 -130 3.9 ATATTTGCACGGCGTCACACTT
Enterobacter sp. 638 Ent638_0610 -130 3.8 TTATTTGCACAGCGTCACACTT
Position: -231
Score: 4.5
Sequence: AAGTGTGACGCTGTGCAAATAT
Locus tag: Salmoneentericaenterica_010100014410
Salmoneentericaenterica_010100014410 -231 4.5 AAGTGTGACGCTGTGCAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araC
Ortholog function: DNA-binding transcriptional dual regulator
Escherichia coli str. K-12 substr. MG1655 b0064 -229 4.4 AAGTGTGACGCCGTGCAAATAA
Salmonella typhimurium LT2 STM0104 -231 4.5 AAGTGTGACGCTGTGCAAATAT
Citrobacter koseri ATCC BAA-895 CKO_03318 -230 4.4 AAGTGTGACGCCGTGCAAATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00063 -229 4.4 AAGTGTGACGCCGTGCAAATAT
Enterobacter sp. 638 Ent638_0611 -228 4.4 AAGTGTGACGCTGTGCAAATAA
Position: -145
Score: 4
Sequence: TTGTGCGAGTCAGCTCAAACTT
Locus tag: Salmoneentericaenterica_010100014655
Salmoneentericaenterica_010100014655 -145 4 TTGTGCGAGTCAGCTCAAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dctA
Ortholog function: C4-dicarboxylate transport protein
Escherichia coli str. K-12 substr. MG1655 b3528 -143 4.1 TTGTGCGAGCCAGCTCAAACTT
Salmonella typhimurium LT2 STM3614 -145 4.1 TTGTGCGAGCCAGCTCAAACTT
Citrobacter koseri ATCC BAA-895 CKO_04970 -145 4 TTGTGCGAGCCAGCTCAAAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03878 -143 3.9 TTGTGCGAGTCAGCTCAAAGAT
Erwinia amylovora ATCC 49946 EAM_3380 -134 4.4 TGAAGTGATTCAGCTCATAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4362 -157 3.8 TGACGTGATTCAGCTCTTGTTT
Edwardsiella tarda EIB202 ETAE_3379 -155 3.6 TTATGCGTTTCAGCTCATAGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3205 -176 4.9 TTATGTGATCTATATCTTAAAA
Position: -98
Score: 3.8
Sequence: TAGTGTAGTCGTCGTCACAAAA
Locus tag: Salmoneentericaenterica_010100014745
Salmoneentericaenterica_010100014745 -98 3.8 TAGTGTAGTCGTCGTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybhQ
Ortholog function: putative inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b0791 -98 3.9 TAGTGTAGTCGGCGTCACAAAA
Salmonella typhimurium LT2 STM0814 -98 3.8 TAGTGTAGTCGTCGTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_02336 -153 3.8 TAGTGTAGTCGTCGTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00819 -97 3.8 TAGTGTAGTAGACGTCACAAAA
Enterobacter sp. 638 Ent638_1282 -98 3.9 AAGTGTAGTCGGCGTCACAAAA
Position: -56
Score: 4
Sequence: TTTTGTGACGACGACTACACTA
Locus tag: Salmoneentericaenterica_010100014750
Salmoneentericaenterica_010100014750 -56 4 TTTTGTGACGACGACTACACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybhP
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0790 -56 4.2 TTTTGTGACGCCGACTACACTA
Salmonella typhimurium LT2 STM0813 -56 4 TTTTGTGACGACGACTACACTA
Citrobacter koseri ATCC BAA-895 CKO_02337 -56 4 TTTTGTGACGACGACTACACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00818 -56 4.2 TTTTGTGACGTCTACTACACTA
Enterobacter sp. 638 Ent638_1281 -57 4.2 TTTTGTGACGCCGACTACACTT
Position: -205
Score: 4.3
Sequence: AAAATTGACGCAGATCAAATAA
Position: -155
Score: 4.5
Sequence: ATTTGTGATTTGGCTAGCCAAT
Locus tag: Salmoneentericaenterica_010100015330
Salmoneentericaenterica_010100015330 -205 4.3 AAAATTGACGCAGATCAAATAA
-155 4.5 ATTTGTGATTTGGCTAGCCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuA
Ortholog function: Mannonate dehydratase (EC 4.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b4322 -271 3.8 TGTTGCGATGAATGTCACATCC
-186 4.5 TCTTGTGATGTGGTTAACCAAT
Salmonella typhimurium LT2 STM3135 -205 4.3 AAAATTGACACAGATCAAATAA
-155 4.6 ATTTGTGATTTGGTTAGCCAAT
Citrobacter koseri ATCC BAA-895 CKO_00609 -115 3.9 GATTGTGAGCTGGATCAATCAA
Enterobacter sp. 638 Ent638_2767 -116 3.9 TTCTGTGAGTTGGATCAATCAA
Serratia proteamaculans 568 Spro_3238 -167 3.9 AACCGTGAAGTGGATCAACCAA
-48 4.1 AATCTTGATCACCACCACAATA
Edwardsiella tarda EIB202 ETAE_2289 -188 4.2 AATCGTGAGGCGGATCAACCAA
Position: -235
Score: 4.1
Sequence: TAACATGACCTGTGTCTCATAA
Locus tag: Salmoneentericaenterica_010100015837
Salmoneentericaenterica_010100015837 -235 4.1 TAACATGACCTGTGTCTCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntT
Ortholog function: gluconate transporter
Escherichia coli str. K-12 substr. MG1655 b3415 -236 4.3 TAATATGACCAACCTCTCATAA
Salmonella typhimurium LT2 STM3512 -236 4.1 TAACATGACCTGTGTCTCATAA
-178 3.8 ATATGTTACCCGTATCATTCTT
-37 3.2 TGACGTTACCCATAACAAAGTA
Citrobacter koseri ATCC BAA-895 CKO_04836 -236 4.2 TAACATGACCTGCCTCTCATAA
-178 3.8 ATATGTTACCCGTATCATTCAT
Position: -128
Score: 4.2
Sequence: TTTATTGATTTAAATCAAAGAA
Locus tag: Salmoneentericaenterica_010100016242
Salmoneentericaenterica_010100016242 -128 4.2 TTTATTGATTTAAATCAAAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: grcA
Ortholog function: Autonomous glycyl radical cofactor
Citrobacter koseri ATCC BAA-895 CKO_00205 -127 4 TTTGTTGATTTAAATCAAAGAA
Position: -123
Score: 5
Sequence: TAATGTGAATTACAGCACATAT
Locus tag: Salmoneentericaenterica_010100016837
Salmoneentericaenterica_010100016837 -123 5 TAATGTGAATTACAGCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpA
Ortholog function: sn-glycerol-3-phosphate dehydrogenase subunit A
Escherichia coli str. K-12 substr. MG1655 b2241 -165 4.6 AAATGTGAATTGCCGCACACAT
Salmonella typhimurium LT2 STM2284 -163 5 TAATGTGAATTACAGCACATAT
Citrobacter koseri ATCC BAA-895 CKO_00536 -163 4.7 TAATGTGAATTACAGCACAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02647 -165 4.3 TACTGTGAAACATCGCACAATT
-115 3.8 ATGTGAGCACGAAATCACATAA
Enterobacter sp. 638 Ent638_2805 -163 4.1 TACTGTGAATCAACGCACAGAT
Yersinia pestis KIM y0404 -231 3.6 AATTGTTACCTATTTTATGAAA
-155 4.4 ACCTGTGATTTTGATCACAATC
Serratia proteamaculans 568 Spro_0200 -231 3.6 CGCTGTGATGGATGGCGCAATT
-138 4.9 AATCGTGATTATGATCACATTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4165 -148 5.1 TTTAGTGATGCAAATCACACTT
Edwardsiella tarda EIB202 ETAE_3115 -247 4 TACTGTGAGAGATCGCTCATAT
-142 4.8 TAGAGTGATTTTGATCACATTG
Proteus mirabilis HI4320 PMI3592 -262 3.7 TACTGTGAAGTAATACTCAGTT
-170 5.5 ATTTGTGATTAGTATCACATAT
Position: -180
Score: 3.8
Sequence: ATGTTTGATTTCGCGCGCCTTT
Position: -131
Score: 5.2
Sequence: ATATGTGCTGTAATTCACATTA
Locus tag: Salmoneentericaenterica_010100016842
Salmoneentericaenterica_010100016842 -180 3.8 ATGTTTGATTTCGCGCGCCTTT
-131 5.2 ATATGTGCTGTAATTCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: glycerol-3-phosphate transporter
Escherichia coli str. K-12 substr. MG1655 b2240 -219 3.7 TTGTTTGATTTCGCGCATATTC
-179 3.6 AAACGTGATTTCATGCGTCATT
-129 4.6 ATGTGTGCGGCAATTCACATTT
Salmonella typhimurium LT2 STM2283 -220 3.6 ATGTTTGATTTCGCGCATAATC
-180 4.2 AAACGTGATTTCGTGCGCCTTT
-131 5.2 ATATGTGCTGTAATTCACATTA
Citrobacter koseri ATCC BAA-895 CKO_00537 -221 3.6 TTGTTTGATTTCGCGCATAATC
-181 4 AAACGTGATTTCGTGCGCTTTT
-132 4.8 ATCTGTGCTGTAATTCACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02646 -218 3.8 TTGTTTGATTTCGAGCATATTC
-178 4.6 TTATGTGATTTCGTGCTCACAT
-128 4.5 AATTGTGCGATGTTTCACAGTA
Enterobacter sp. 638 Ent638_2804 -201 3.6 TTGTTTGATTTCGAACATAATC
-161 3.8 AAGCGTGATCTCATGCGCTTAT
-111 4 ATCTGTGCGTTGATTCACAGTA
Erwinia amylovora ATCC 49946 EAM_0195 -240 3.7 AAACGCGATGCGGTTAACGATG
-147 3.7 ATTTGTGCCTCTCTTCACGGTC
Serratia proteamaculans 568 Spro_0199 -249 4.5 GAATGTGATCATAATCACGATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4166 -253 3.7 ATGTTTGATAAAGAGCAAAAAC
-193 4.9 AAGTGTGATTTGCATCACTAAA
Edwardsiella tarda EIB202 ETAE_3116 -200 3.7 ATATGAGCGATCTCTCACAGTA
Proteus mirabilis HI4320 PMI3591 -291 3.6 ATGTTTGATAATGAGCAAAAAC
-232 5.4 ATATGTGATACTAATCACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4119 -250 4.9 TATTGTGACAATTGTCACAATT
Position: -142
Score: 4.2
Sequence: TTGTGTGACGCATGCCGCATTT
Locus tag: Salmoneentericaenterica_010100016982
Salmoneentericaenterica_010100016982 -142 4.2 TTGTGTGACGCATGCCGCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Escherichia coli str. K-12 substr. MG1655 b0907 -155 4.8 TTGTGTGATGCAAGCCACATTT
Salmonella typhimurium LT2 STM0977 -142 4.2 TTGTGTGACGCATGCCGCATTT
Citrobacter koseri ATCC BAA-895 CKO_02165 -171 4.6 TTGTGTGACGTAGCGCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00935 -145 3.7 TTGTGTGACGGCGGCCGCGTTT
Enterobacter sp. 638 Ent638_1427 -119 4.4 TTGTGTGACGGTGGACACATTT
Yersinia pestis KIM y2784 -39 3.3 TATAACGATGGCAATCTCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2594 -78 3.5 AAGTATGACGGGTATAAAAATG
Proteus mirabilis HI4320 PMI0711 -119 3.5 TATTTTTGTGTGCTACACATAA
Position: -78
Score: 4.4
Sequence: AGATATGATCTATATCAAATTC
Locus tag: Salmoneentericaenterica_010100016997
Salmoneentericaenterica_010100016997 -78 4.4 AGATATGATCTATATCAAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: focA
Ortholog function: formate transporter
Escherichia coli str. K-12 substr. MG1655 b0904 -156 3.6 TATTTTTATTTGGATAATCAAA
-78 3.8 AGATATGATCTATATCAATTTC
Salmonella typhimurium LT2 STM0974 -78 4.4 AGATATGATCTATATCAAATTC
Citrobacter koseri ATCC BAA-895 CKO_02167 -198 3.6 TATTTTTATTTGGATAATCAAA
-120 4.4 AGATATGATCTATATCAAATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00932 -121 3.8 AGATATGATCTATATCAATTTC
Enterobacter sp. 638 Ent638_1424 -78 3.8 AGATATGATCTATATCAATTTC
Yersinia pestis KIM y2789 -84 4 CAATATGATCCATATCAATTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2596 -79 4.5 CAATATGATCCACATCAAATTT
Proteus mirabilis HI4320 PMI0706 -188 4 TTTTTTGATAAAATTTAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1614 -88 4.7 AATTATGATCTATATCAAATTC
Position: -29
Score: 4.2
Sequence: AAATTTGAACTTCCTCACGGTT
Locus tag: Salmoneentericaenterica_010100017032
Salmoneentericaenterica_010100017032 -29 4.2 AAATTTGAACTTCCTCACGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycaD
Ortholog function: Hypothetical MFS-type transporter protein ycaD
Escherichia coli str. K-12 substr. MG1655 b0898 -29 4.2 AAATTTGAACTTCCTCACGGTT
Salmonella typhimurium LT2 STM0968 -29 4.2 AAATTTGAACTTCCTCACGGTT
Citrobacter koseri ATCC BAA-895 CKO_02171 -29 4.2 AAATTTGAACTTCCTCACGGTT
Position: -144
Score: 3.9
Sequence: TTTTTTGCGAGTGTTCACAGAA
Locus tag: Salmoneentericaenterica_010100017087
Salmoneentericaenterica_010100017087 -144 3.9 TTTTTTGCGAGTGTTCACAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysQ
Ortholog function: PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase
Escherichia coli str. K-12 substr. MG1655 b4214 -126 3.6 AACAGTGAAGAATGCCACAATT
Salmonella typhimurium LT2 STM4404 -144 3.9 TTTTTTGCGAGTGTTCACAGAA
Citrobacter koseri ATCC BAA-895 CKO_03615 -178 4.1 TTTTTAGATCTGAAACACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04608 -178 4.1 TTTTATGAGCGATAGCACAGAA
-126 3.7 AAATGTGAATCTTGCCAGAAAA
-57 3.9 TGATGCGATATAAATAAAACAA
Enterobacter sp. 638 Ent638_0393 -167 3.9 TTTTTCGATCCAAGCCACAAAA
Erwinia amylovora ATCC 49946 EAM_0455 -158 4.2 AAATGTGACACAGCACGAATAA
Serratia proteamaculans 568 Spro_0454 -180 3.7 AACTGTGAAGTGTGGCAGAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3601 -258 3.7 TAAAGTGATTATCGTCTCTAAA
Position: -144
Score: 3.7
Sequence: TTCTGTGAACACTCGCAAAAAA
Locus tag: Salmoneentericaenterica_010100017092
Salmoneentericaenterica_010100017092 -144 3.7 TTCTGTGAACACTCGCAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cpdB
Ortholog function: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
Escherichia coli str. K-12 substr. MG1655 b4213 -118 3.8 AACTGTGATAGTGTCATCATTT
-85 3.8 AATTGTGGCATTCTTCACTGTT
Salmonella typhimurium LT2 STM4403 -145 3.7 TTCTGTGAACACTCGCAAAAAA
Citrobacter koseri ATCC BAA-895 CKO_03616 -25 4.2 TTTTGTGTTTCAGATCTAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04607 -156 3.8 TTGTTTTATTTATATCGCATCA
-87 3.7 TTTTCTGGCAAGATTCACATTT
-35 4.2 TTCTGTGCTATCGCTCATAAAA
Enterobacter sp. 638 Ent638_0392 -34 4 TTTTGTGGCTTGGATCGAAAAA
Yersinia pestis KIM y0653 -148 3.6 AACTGTGAGCGTCTACGCGTTA
-116 3.8 TTTTCTGCCAAACTTCACACTT
-63 4.4 TTTTGCGATACATATCGAATAT
Serratia proteamaculans 568 Spro_0453 -95 3.8 TTTTCTGCCACACTTCACAGTT
Position: -154
Score: 4.1
Sequence: AAACTTGATGCACATCAATTTT
Locus tag: Salmoneentericaenterica_010100017387
Salmoneentericaenterica_010100017387 -154 4.1 AAACTTGATGCACATCAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Escherichia coli str. K-12 substr. MG1655 b1109 -154 3.9 AAACTTGATTAACATCAATTTT
Salmonella typhimurium LT2 STM1211 -154 4.1 AAACTTGATGCACATCAATTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01106 -152 4.1 AAACTTGATGCACATCAATTTT
Enterobacter sp. 638 Ent638_1624 -153 4 AAACTTGATTCATATCAATTTT
Erwinia amylovora ATCC 49946 EAM_1473 -55 3.7 TAAGGTTATTTTATTAACCTTT
Yersinia pestis KIM y1777 -152 3.8 AAAGTTGATATATATCAATTTT
Serratia proteamaculans 568 Spro_1926 -153 4.3 AAGTTTGATGTACATCAATTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1815 -153 4 TAAATTGATATATATCAATTTT
Edwardsiella tarda EIB202 ETAE_2070 -166 4.3 TTATTTGATTTGAATCAATTTT
Proteus mirabilis HI4320 PMI0875 -157 4.6 TTTTTTGATATAAATCAACTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2821 -154 3.8 GAATTTGATGTTGTTCAATTTT
Position: -175
Score: 4.7
Sequence: AGATGTGATCTACATCACACGT
Locus tag: Salmoneentericaenterica_010100017397
Salmoneentericaenterica_010100017397 -175 4.7 AGATGTGATCTACATCACACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycfQ
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1111 -175 5.3 AGATGTGATCTGGATCACATAC
Salmonella typhimurium LT2 STM1213 -175 4.7 AGATGTGATCTACATCACACGT
Citrobacter koseri ATCC BAA-895 CKO_01943 -227 4.4 AGATGTGATCCAGGTCACACGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01109 -227 4.8 TAATGTGATCTATGTCACACGT
Enterobacter sp. 638 Ent638_1626 -174 4.6 AGATGTGATCTGCATCACACGT
Position: -106
Score: 4.3
Sequence: AGGTGTGACACGCCTCGCACTT
Position: -64
Score: 4
Sequence: TATCGTGATGCCCATCACTTCC
Locus tag: Salmoneentericaenterica_010100017724
Salmoneentericaenterica_010100017724 -106 4.3 AGGTGTGACACGCCTCGCACTT
-64 4 TATCGTGATGCCCATCACTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroH
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Escherichia coli str. K-12 substr. MG1655 b1704 -106 4.3 AGGTGTGACACACCTCGCACTT
-64 4 TATCGTGATGCGCATCACTTCC
Salmonella typhimurium LT2 STM1347 -106 4.3 AGGTGTGACACGCCTCGCACTT
-64 4 TATCGTGATGCCCATCACTTCC
Citrobacter koseri ATCC BAA-895 CKO_01728 -115 4.3 AGGTGTGAAACGCCTCGCATTT
-64 4.3 TATTGTGATGCCCATCACTTCC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02162 -63 4 TATCGTGATGCGCATCACTTCC
Enterobacter sp. 638 Ent638_1743 -126 3.6 AGTTATGATCGCTTTCACTCTC
-62 3.6 TAAGGTGATGCCCATCACTTCC
Yersinia pestis KIM y1928 -64 4.3 TATTGTGATCGCCATCACTTCC
Serratia proteamaculans 568 Spro_2172 -135 3.9 TTTTGTGCTTTTTTTAGCGATT
-64 4.3 TATTGTGATCGCCATCACTTCC
Edwardsiella tarda EIB202 ETAE_1792 -63 4 TATCGTGATCCCCATCACTTCC
Proteus mirabilis HI4320 PMI1423 -55 3.9 TATTGTGATCTTAATCACTGGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2630 -62 3.8 TATTGTAATTTCCATTATCTAT
Position: -129
Score: 4
Sequence: TGCGGTGAGTTGTTTCACAAAA
Locus tag: Salmoneentericaenterica_010100017764
Salmoneentericaenterica_010100017764 -129 4 TGCGGTGAGTTGTTTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygbI
Ortholog function: Hypothetical transcriptional regulator ygbI
Escherichia coli str. K-12 substr. MG1655 b2735 -166 3.7 TTGTTTGATATTGTGAATATAA
-127 5.2 TATGGTGATCTGATTCACATAA
Salmonella typhimurium LT2 STM2919 -128 4 TGCGGTGAGTTGTTTCACAAAA
-87 3.6 TTTTGTGAAGGCAATCCTCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01606 -271 3.6 TAATGTGATTTAATGATAGAAT
-230 4.7 ATATGTGAGAGTTATCACGAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_pKPN4p07051 -233 3.6 TAATGTGATTTAATGATAGAAT
-192 4.7 TTATGTGAGAGTTATCACGAAT
Erwinia amylovora ATCC 49946 EAM_1104 -238 4.5 ATTAGTGATAAACTTCACATCA
Serratia proteamaculans 568 Spro_1493 -211 3.9 ATCAGCGATCGTTGTCACAATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4325 -267 4.8 TGTGGTGATTTTTATCACATAA
Edwardsiella tarda EIB202 ETAE_1921 -132 3.9 AACCGTGTTTATCCTCACAAAT
Position: -147
Score: 3.9
Sequence: TTTATTGACGCAGTACACACAT
Locus tag: Salmoneentericaenterica_010100017949
Salmoneentericaenterica_010100017949 -147 3.9 TTTATTGACGCAGTACACACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: facilitator for glycerol uptake
Salmonella typhimurium LT2 STM4087 -147 3.9 TTTATTGACGCAGTACACACAT
Position: -95
Score: 4.8
Sequence: AAATGTGCCTTGTGTCACATTT
Locus tag: Salmoneentericaenterica_010100018172
Salmoneentericaenterica_010100018172 -95 4.8 AAATGTGCCTTGTGTCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dacD2
Ortholog function: D-alanyl-D-alanine carboxypeptidase
Escherichia coli str. K-12 substr. MG1655 b2010 -99 4.3 AAATGAGAGGGTAGTCACATTT
Salmonella typhimurium LT2 STM2062 -95 4.8 AAATGTGCCTTGTGTCACATTT
Position: -97
Score: 3.7
Sequence: AAACGAGCTATTCATCATATAT
Locus tag: Salmoneentericaenterica_010100018537
Salmoneentericaenterica_010100018537 -97 3.7 AAACGAGCTATTCATCATATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nhaA
Ortholog function: Na+/H+ antiporter NhaA type
Salmonella typhimurium LT2 STM0039 -97 3.7 AAACGAGCTATTCATCATATAT
Yersinia pestis KIM y3704 -147 4.1 AAATGTGATATGCGTTATCAAT
Serratia proteamaculans 568 Spro_0694 -120 4.7 AAGTGTGATATAAATCGCTTAT
Proteus mirabilis HI4320 PMI0011 -110 3.9 ATAAGCGATTGAGATCGAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0587 -122 4.4 TATTGAGATGTAGATCATCAAT
Position: -131
Score: 3.7
Sequence: AATAGTGACGCGCTTCGCAACC
Locus tag: Salmoneentericaenterica_010100018702
Salmoneentericaenterica_010100018702 -131 3.7 AATAGTGACGCGCTTCGCAACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadD
Ortholog function: long-chain-fatty-acid--CoA ligase
Escherichia coli str. K-12 substr. MG1655 b1805 -131 3.7 AATAGTGACGCGCTTCGCAACC
Salmonella typhimurium LT2 STM1818 -131 3.7 AATAGTGACGCGCTTCGCAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02322 -97 3.7 AATAGTGACGCGCTTCGCAACC
Erwinia amylovora ATCC 49946 EAM_1956 -130 3.9 TTTAGTGATGCGCTTCGCAACC
Yersinia pestis KIM y2236 -80 4.1 AATAGTGATGTATATCTCAACC
Serratia proteamaculans 568 Spro_2760 -99 3.9 ATTAGTGACGTACATCGCAACC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2372 -132 3.8 ATTAGTGATCGTTCTCGCAACC
-75 3.7 TAAAATAATGTTAATAACAATA
Proteus mirabilis HI4320 PMI1166 -121 4.4 TTTAGTGATACACTTCGCATCT
Photorhabdus luminescens subsp. laumondii TTO1 plu2134 -288 3.8 AAATGCTATCTTAAGCAAAAAA
-137 4 ATTAGTGATGTGTATCTCAACC
Position: -131
Score: 4.3
Sequence: ATGTCTGACGGAGTTCACACTT
Locus tag: Salmoneentericaenterica_010100018742
Salmoneentericaenterica_010100018742 -131 4.3 ATGTCTGACGGAGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompA
Ortholog function: outer membrane protein A
Escherichia coli str. K-12 substr. MG1655 b0957 -188 4 ATGCCTGACGGAGTTCACACTT
Salmonella typhimurium LT2 STM1070 -188 4.3 ATGTCTGACGGAGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02111 -164 4 ATGCCTGACGGAGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00986 -185 3.9 ATGCCTGACAGAGTTCACACTT
Enterobacter sp. 638 Ent638_1469 -189 4 ATGCCTGACGGAGTTCACACTT
Serratia proteamaculans 568 Spro_1754 -195 3.8 TTTTTAGAGCTTTATCACATCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1751 -200 3.9 TCTTATGACACAAATCACATCA
Edwardsiella tarda EIB202 ETAE_1267 -196 3.7 TTTGGTGAGCATAATCACATCG
Position: -73
Score: 3.6
Sequence: AAAAGTGACCTGACGCAATATT
Locus tag: Salmoneentericaenterica_010100019032
Salmoneentericaenterica_010100019032 -73 3.6 AAAAGTGACCTGACGCAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepT
Ortholog function: peptidase T
Escherichia coli str. K-12 substr. MG1655 b1127 -73 3.6 AAAAGTGACCTGACGCAATATT
Salmonella typhimurium LT2 STM1227 -73 3.6 AAAAGTGACCTGACGCAATATT
Citrobacter koseri ATCC BAA-895 CKO_01926 -73 3.6 AAAAGTGACCTGACGCAATATT
Enterobacter sp. 638 Ent638_1640 -31 3.6 AAAAGTGACCTGACGCAATATT
Yersinia pestis KIM y1791 -27 3.7 ATATTTGATCATGATCACTTCC
Serratia proteamaculans 568 Spro_2009 -188 4.1 CGTCGTGAAGAAGATCACACAT
Position: -78
Score: 3.7
Sequence: TAATTTATTACATGTCACACTT
Locus tag: Salmoneentericaenterica_010100019878
Salmoneentericaenterica_010100019878 -78 3.7 TAATTTATTACATGTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galE2
Ortholog function: UDP-galactose-4-epimerase
Escherichia coli str. K-12 substr. MG1655 b0759 -78 3.8 TAATTTATTCCATGTCACACTT
Salmonella typhimurium LT2 STM0776 -78 3.7 TAATTTATTACATGTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02376 -36 3.7 TAATATATTCCATGTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00773 -78 3.7 TAACTTGTGCTATGTCACACTT
-44 4.1 ATATGCTATCTTCCTCACAAAC
Yersinia pestis KIM y3043 -163 3.7 TTATTTGTCTATGCTCACAGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1389 -72 3.7 ATTCTCGCTGTAGATCACCTTT
Edwardsiella tarda EIB202 ETAE_2564 -195 3.7 TAGTGTAAGCGATACCACAAAC
Position: -103
Score: 3.5
Sequence: CCCTGTGATGTTTCTCACGCAG
Position: -38
Score: 3.3
Sequence: ATTTGTGAGCATTTTTGAACTC
Locus tag: Salmoneentericaenterica_010100020173
Salmoneentericaenterica_010100020173 -103 3.5 CCCTGTGATGTTTCTCACGCAG
-38 3.3 ATTTGTGAGCATTTTTGAACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: galS
Ortholog function: Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b2151 -146 3.5 GATAACGATCTGGATCACATTC
-95 3.9 TGCTGTGACTCGATTCACGAAG
Salmonella typhimurium LT2 STM2191 -154 3.5 GATAACGATCTGGATCACATTC
-103 3.5 CCCTGTGATGTTTCTCACGCAG
-38 3.3 ATTTGTGAGCATTTTTGAACTC
Citrobacter koseri ATCC BAA-895 CKO_00640 -157 3.5 GATAACGATCTGGATCACATTC
-106 3.4 CCCTGTGACCTTACTCACGTAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02589 -160 3.3 GATAACGATCTCGATCACAATC
-109 3.4 CCGTGTGACCTCACTCACGCAG
-33 3.6 TGACGTGCTGTAATTCTCTTAA
Enterobacter sp. 638 Ent638_2751 -160 3.4 GATAACGATCTGGATCACAATC
-109 4.1 CTGTGTGAGCTTCTTCACGTAG
Erwinia amylovora ATCC 49946 EAM_2208 -110 3.4 GGCTGTGAGGTTTCTCACGTAG
Serratia proteamaculans 568 Spro_1562 -135 3.4 AATTGAGATCTGGCGCAGGTAG
-84 3.5 TCCTGTGACGGGATTCACGCAG
Position: -183
Score: 3.6
Sequence: AGACGTGCCGTAGCTCCCACTT
Locus tag: Salmoneentericaenterica_010100020838
Salmoneentericaenterica_010100020838 -183 3.6 AGACGTGCCGTAGCTCCCACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ugpB
Ortholog function: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
Escherichia coli str. K-12 substr. MG1655 b3453 -182 3.6 ATCCGTGCCCCATCTCCCATTT
Salmonella typhimurium LT2 STM3557 -184 3.5 ATCCGTGCCGTAGCTCCCACTT
Citrobacter koseri ATCC BAA-895 CKO_04874 -185 3.3 TATTTTTCTGTCATTCGCGCAT
-162 3.2 TCATGTTACCTCGCGAGCATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03813 -88 3.4 TATTTTTCTGTAATTCGAACAT
Enterobacter sp. 638 Ent638_3856 -162 3.5 AGTTATTATTCCCGCCACATTA
-58 3.2 TCATGTTACCTCGCGAGCATAA
Erwinia amylovora ATCC 49946 EAM_3285 -171 3.9 GTGTGTGATGCCGTTAACACAG
Yersinia pestis KIM y0434 -72 3.5 AAAACTGATTTATTTCGCTCAT
-41 4.1 TTTTTTGATGTGAGCCACACAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2429 -145 3.5 TATCGCGATACAGTTCATCACT
Edwardsiella tarda EIB202 ETAE_3321 -63 3.4 CAATATGTTGTTTATCACTCAA
Position: -202
Score: 3.6
Sequence: TCTTGTTACAAGTTTAACACTT
Locus tag: Salmoneentericaenterica_010100021342
Salmoneentericaenterica_010100021342 -202 3.6 TCTTGTTACAAGTTTAACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: csgD
Ortholog function: DNA-binding transcriptional activator in two-component regulatory system
Escherichia coli str. K-12 substr. MG1655 b1040 -201 3.9 TTTAGTTACATGTTTAACACTT
-134 3.3 TAGTTTTATATTTTACCCATTT
Salmonella typhimurium LT2 STM1142 -202 3.4 TTTGGTTACAAGTTTAACACTT
Citrobacter koseri ATCC BAA-895 CKO_02029 -207 4.1 TTTTGTTACAAGTTTAACACTT
Position: -113
Score: 4.2
Sequence: AAATGTGTGCGTGATCTCATTA
Locus tag: Salmoneentericaenterica_010100021362
Salmoneentericaenterica_010100021362 -113 4.2 AAATGTGTGCGTGATCTCATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycdZ
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1036 -52 4 AAATGTGTGCTCGATCTCATTC
-50 3.7 ATGTGTGCTCGATCTCATTCAT
Citrobacter koseri ATCC BAA-895 CKO_02033 -40 3.9 AAATGTGTGCGTGATCTCATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01059 -52 4.1 TACTGTGTTTTAGATCGCATTC
Serratia proteamaculans 568 Spro_3290 -125 4.2 TTTTGTGACAAATTCCACATCT
-96 3.6 TATCTTGTTTCTCATTACATAT
-73 4.6 TTATGTGAAATACATCACATGA
Edwardsiella tarda EIB202 ETAE_2360 -124 4.3 AAGTGTGATTGATGTCACTTTG
-72 3.6 CGGTGTGATGTCCATCAATGAA
Proteus mirabilis HI4320 PMI3124 -240 3.7 ATTAATAATATATATCAAACAA
Position: -122
Score: 4.3
Sequence: TATTGTTAATCACATCATAAAT
Locus tag: Salmoneentericaenterica_010100023227
Salmoneentericaenterica_010100023227 -122 4.3 TATTGTTAATCACATCATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hpaG
Ortholog function: 4-hydroxyphenylacetate catabolism
Salmonella typhimurium LT2 STM1101 -122 4.7 TATTGTTAATCACATCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04788 -125 4.4 TTGTGTTAATCCGATCACAAAA
Serratia proteamaculans 568 Spro_0626 -123 5 TTTTGTTATCACGATCACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu0989 -159 3.7 AATAATGATAAAAAACAAATTT
-129 4.9 TATTGTTACTGAGATCACAATT
Position: -166
Score: 3.9
Sequence: AAGTGTTAACTCCGTCACCCTT
Locus tag: Salmoneentericaenterica_010100023579
Salmoneentericaenterica_010100023579 -166 3.9 AAGTGTTAACTCCGTCACCCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nupG
Ortholog function: Nucleoside permease NupG
Escherichia coli str. K-12 substr. MG1655 b2964 -166 5.2 AAATGTTATCCACATCACAATT
-116 3.8 TTATTTGCCACAGGTAACAAAA
Salmonella typhimurium LT2 STM3113 -166 3.9 AAGTGTTAACTCCGTCACCCTT
-116 3.6 ATATTTGTCACAGGTAACAAAA
-50 3.6 AAATGTGCCTTTTAAAACATTC
Citrobacter koseri ATCC BAA-895 CKO_04339 -166 3.9 AAGTGTTAACTCCATCACTCTT
-116 3.6 ATATTTGTCACAGGTAACAAAA
-50 3.6 AAATGTGCCTTTTAAAACATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03396 -49 4.2 TAATGTTATTTTAAAAACATAA
Enterobacter sp. 638 Ent638_3369 -163 4.5 AAACGTTATTTGCATCACAATC
-114 3.7 TTTTTTGCGGGAGGTAACAAAA
Position: -272
Score: 4.2
Sequence: CTTTGTGATCGCTTTCACGGAG
Locus tag: Salmoneentericaenterica_010100023666
Salmoneentericaenterica_010100023666 -272 4.2 CTTTGTGATCGCTTTCACGGAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: glutamine synthetase
Escherichia coli str. K-12 substr. MG1655 b3870 -269 4.2 CTTTGTGATCGCTTTCACGGAG
Salmonella typhimurium LT2 STM4007 -272 4.2 CTTTGTGATCGCTTTCACGGAG
-114 3.8 CAATGTGAAAGTTGGCACAGAT
Citrobacter koseri ATCC BAA-895 CKO_03140 -250 4.2 CTTTGTGATCGCTTTCACGGAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04178 -299 3.9 CTTTGTGACCGCTTTCACGGAG
Serratia proteamaculans 568 Spro_4881 -267 4 GTATGTGATCCCTTTCACGGTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0029 -265 4.2 CTTTGTGATCCCTTTCACGGTG
Edwardsiella tarda EIB202 ETAE_3493 -267 4.2 GTTTGTGATCCTATTCACGATG
Proteus mirabilis HI4320 PMI2882 -270 4.7 AATTGTGATCCTTTTCACGCCT
-215 3.8 AATTGTGCAACTATTCAGACTT
-181 3.9 ATTTGTGCAATAATTAAAAAAT
Position: -217
Score: 4.5
Sequence: TTTGGTGACATGTATCACGTTT
Locus tag: Salmoneentericaenterica_010100023771
Salmoneentericaenterica_010100023771 -217 4.5 TTTGGTGACATGTATCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serA
Ortholog function: D-3-phosphoglycerate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2913 -210 4.1 TTTGGTGACATGTGTCACGCTT
Salmonella typhimurium LT2 STM3062 -217 4.5 TTTGGTGACATGTATCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03348 -214 4.6 TTTGGTGACTTCTGTCACATTT
Enterobacter sp. 638 Ent638_3332 -215 4.1 TTCGGTGACTTGTATCACGTTT
Yersinia pestis KIM y3301 -126 4.8 TTTGGTGATATATATCACATTC
Serratia proteamaculans 568 Spro_3923 -215 4.4 TTTGGTGACATATGTCACATTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3905 -214 3.9 TTTGGTACTTAATATCACATTT
Proteus mirabilis HI4320 PMI2031 -210 4 TTCAGTGATATATATCACACGA
Photorhabdus luminescens subsp. laumondii TTO1 plu3605 -207 4.4 TTTAGTGATATATTTCATATCT
-178 4.2 TTATTTGATCTAAATCCTAATT
-105 4.4 TTATGTGATGGGAATAGCAATC
Position: -97
Score: 4.7
Sequence: AACAGTGATATAGATCACATAC
Locus tag: Salmoneentericaenterica_010100023916
Salmoneentericaenterica_010100023916 -97 4.7 AACAGTGATATAGATCACATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: maa
Ortholog function: maltose O-acetyltransferase
Escherichia coli str. K-12 substr. MG1655 b0459 -97 4.8 CTATGTGATCTTTATCACACAG
Salmonella typhimurium LT2 STM0472 -97 4.7 AACAGTGATATAGATCACATAG
Citrobacter koseri ATCC BAA-895 CKO_02692 -101 4.6 TCTCGTGATTTAGATCACATCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00440 -100 4.7 CTTTGTGATAGACATCACATCA
Enterobacter sp. 638 Ent638_0939 -98 4.3 TGCTGTGACTCTGATCACATCA
Position: -100
Score: 3.9
Sequence: ATGAGTGACATGTGCCACACTT
Locus tag: Salmoneentericaenterica_010100023946
Salmoneentericaenterica_010100023946 -100 3.9 ATGAGTGACATGTGCCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybaY
Ortholog function: Glycoprotein-polysaccharide metabolism
Escherichia coli str. K-12 substr. MG1655 b0453 -101 4.3 ATGCGTGATGTGTGCCACACTT
Salmonella typhimurium LT2 STM0465 -100 3.9 ATGAGTGACATGTGCCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02705 -102 4 ATAAGTGAGATATGCCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00416 -99 3.8 ATCTGAGATCTGTGCCACACTT
Enterobacter sp. 638 Ent638_0921 -96 4.3 ATAAGTGATATGTGCCACACTT
Position: -136
Score: 3.5
Sequence: AAGTGTGGCACATGTCACTCAT
Locus tag: Salmoneentericaenterica_010100023951
Salmoneentericaenterica_010100023951 -136 3.5 AAGTGTGGCACATGTCACTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tesB
Ortholog function: Acyl-CoA thioesterase II (EC 3.1.2.-)
Escherichia coli str. K-12 substr. MG1655 b0452 -138 3.9 AAGTGTGGCACACATCACGCAT
Citrobacter koseri ATCC BAA-895 CKO_02706 -135 3.9 AAGTGTGGCATATCTCACTTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00415 -139 3.8 AAGTGTGGCACAGATCTCAGAT
Enterobacter sp. 638 Ent638_0920 -131 4 AAGTGTGGCACATATCACTTAT
Yersinia pestis KIM y1043 -153 3.6 TAGCGTGCTAATTATAGCATAA
Serratia proteamaculans 568 Spro_1111 -54 3.6 TGCCGTGATATTCCGCACACTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1162 -154 3.7 TAGTATGATTCAATAAACACAA
Position: -107
Score: 4.6
Sequence: ATATGTGAAGCACGTCACCATA
Locus tag: Salmoneentericaenterica_010100024076
Salmoneentericaenterica_010100024076 -107 4.6 ATATGTGAAGCACGTCACCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dadA
Ortholog function: D-amino acid dehydrogenase small subunit
Escherichia coli str. K-12 substr. MG1655 b1189 -116 4.7 AGATGTGAGCCAGCTCACCATA
Salmonella typhimurium LT2 STM1803 -107 4.6 ATATGTGAAGCACGTCACCATA
Citrobacter koseri ATCC BAA-895 CKO_01193 -107 4.5 AGATGTGAGGTGCGTCACCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02309 -106 4.1 TGCTGTGAGTTAAGTCACCATA
Enterobacter sp. 638 Ent638_2363 -107 4.3 AGGTGTGAGGTAAGTCACCATA
Serratia proteamaculans 568 Spro_2746 -113 4.6 AATTGTGAATGTTGTCACGTTT
Proteus mirabilis HI4320 PMI1509 -121 4.7 AAATGTGATTTGACTCTAAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2561 -114 5.4 AATTGTGATCTAAATCATAAAT
Position: -237
Score: 4.9
Sequence: TATGGTGACGTGCTTCACATAT
Locus tag: Salmoneentericaenterica_010100024081
Salmoneentericaenterica_010100024081 -237 4.9 TATGGTGACGTGCTTCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycgB
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1188 -235 4.4 TATGGTGAGCTGGCTCACATCT
Salmonella typhimurium LT2 STM1804.S -243 4.9 TATGGTGACGTGCTTCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02310 -174 4 TATGGTGACTTAACTCACAGCA
Enterobacter sp. 638 Ent638_2364 -236 4.2 TATGGTGACTTACCTCACACCT
Position: -276
Score: 3.7
Sequence: AATTGTTATTTAATTTAACGTT
Locus tag: Salmoneentericaenterica_010100024151
Salmoneentericaenterica_010100024151 -276 3.7 AATTGTTATTTAATTTAACGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: b1821
Ortholog function: hypothetical protein
Salmonella typhimurium LT2 STM1834 -276 3.7 AATTGTTATTTAATTTAACGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2389 -267 3.8 TAGTGTTGTTTGCATCATAAAT
Proteus mirabilis HI4320 PMI1608 -272 3.8 AATTATTATCAATATCATCTTT
-237 3.9 TAATATGTTGCCTTTCATAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2701 -281 3.9 TATTGTGCTATCTTTTAAATTG
-179 3.7 AAACGTGGTGCGGGTAACCTTA
Position: -250
Score: 3.9
Sequence: TTTTGTGCCTGCCATAACCTTA
Position: -203
Score: 3.9
Sequence: AAATGTGAGGGGGGTCATAACG
Locus tag: Salmoneentericaenterica_010100024236
Salmoneentericaenterica_010100024236 -250 3.9 TTTTGTGCCTGCCATAACCTTA
-203 3.9 AAATGTGAGGGGGGTCATAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: chbB
Ortholog function: N,N'-diacetylchitobiose-specific PTS system , EIIB component
Salmonella typhimurium LT2 STM1312 -250 3.9 TTTTGTGCCTGCCATAACCTTA
-203 3.9 AAATGTGAGGGGGGTCATAACG
Position: -106
Score: 3.6
Sequence: TTTCTTGCTTACCGTCACATTG
Position: -54
Score: 3.6
Sequence: TATTCTGATAAAACGCAAATAC
Locus tag: Salmoneentericaenterica_010100024301
Salmoneentericaenterica_010100024301 -106 3.6 TTTCTTGCTTACCGTCACATTG
-54 3.6 TATTCTGATAAAACGCAAATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gdhA
Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Escherichia coli str. K-12 substr. MG1655 b1761 -106 3.5 TTTCTTGCTTACCGTCACATTC
Salmonella typhimurium LT2 STM1299 -107 3.6 TTTCTTGCTTACCGTCACATTG
-55 3.6 TATTCTGATAAAACGCAAATAC
Citrobacter koseri ATCC BAA-895 CKO_01789 -107 3.4 TTTCTTGCTTACCGTCACACTG
Enterobacter sp. 638 Ent638_1685 -110 3.3 AATTTTCACTTGCCTCGCAAAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0051 -234 3.6 TTTTGTTATATAACAAAAACTT
Proteus mirabilis HI4320 PMI3008 -195 3.4 AATCCTGATTTTATTAGCCTTT
-88 3.5 AAACAATATCAACCTCACATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0122 -92 3.5 AAACACAACTTACCTCACATTT
Position: -137
Score: 4.7
Sequence: TAATGTGACATCAGTCACGATT
Locus tag: Salmoneentericaenterica_010100024351
Salmoneentericaenterica_010100024351 -137 4.7 TAATGTGACATCAGTCACGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: msrB
Ortholog function: methionine sulfoxide reductase B
Escherichia coli str. K-12 substr. MG1655 b1778 -137 5.2 AAATGTGATTTTCATCACGATT
Salmonella typhimurium LT2 STM1291 -107 4.7 TAATGTGACATCAGTCACGATT
Citrobacter koseri ATCC BAA-895 CKO_01799 -107 4.9 AAACGTGATTCCGATCACGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01198 -135 5.1 AAACGTGATTTAAGTCACAATT
Enterobacter sp. 638 Ent638_1676 -137 5.2 ATATGTGAGAAAGATCACAATT
Erwinia amylovora ATCC 49946 EAM_1930 -137 5.2 AATGGTGATCTGCATCACAATT
Yersinia pestis KIM y2164 -85 5.1 ATTTGCGATTTTTATCACATTT
Serratia proteamaculans 568 Spro_2727 -143 5.7 ATATGTGATCGGTATCACATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2343 -135 5.6 TTATGTGATACACATCACAATT
Edwardsiella tarda EIB202 ETAE_1484 -91 4.9 GTTTGTGATGCTCATCACAAAA
Proteus mirabilis HI4320 PMI1503 -137 5.3 TTATGTGAAATGTATCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2557 -267 4.6 ATATGCGAGTCACATCACAATA
Position: -226
Score: 4.8
Sequence: AATCGTGACTGATGTCACATTA
Locus tag: Salmoneentericaenterica_010100024356
Salmoneentericaenterica_010100024356 -226 4.8 AATCGTGACTGATGTCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gapA
Ortholog function: glyceraldehyde-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b1779 -226 5.3 AATCGTGATGAAAATCACATTT
Salmonella typhimurium LT2 STM1290 -226 4.8 AATCGTGACTGATGTCACATTA
Citrobacter koseri ATCC BAA-895 CKO_01800 -226 5 AATCGTGATCGGAATCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01197 -225 5.2 AATTGTGACTTAAATCACGTTT
Enterobacter sp. 638 Ent638_1675 -225 5.7 AATTGTGATCTTTCTCACATAT
Erwinia amylovora ATCC 49946 EAM_1931 -215 5.4 AATTGTGATGCAGATCACCATT
Yersinia pestis KIM y2165 -218 5.1 AAATGTGATAAAAATCGCAAAT
Serratia proteamaculans 568 Spro_2728 -227 5.6 ATATGTGATACCGATCACATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2344 -235 5.8 AATTGTGATGTGTATCACATAA
Edwardsiella tarda EIB202 ETAE_1483 -227 5.1 TTTTGTGATGAGCATCACAAAC
Proteus mirabilis HI4320 PMI1504 -226 5.6 AAATGTGATACATTTCACATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2558 -224 5.4 TATTGTGATGTGACTCGCATAT
Position: -134
Score: 3.8
Sequence: AAGCACGATATTGCTCACACTA
Locus tag: Salmoneentericaenterica_010100024523
Salmoneentericaenterica_010100024523 -134 3.8 AAGCACGATATTGCTCACACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: caiF
Ortholog function: transcriptional activator for carnitine metabolism
Escherichia coli str. K-12 substr. MG1655 b0034 -134 3.8 AAGCAGGATTTAGCTCACACTT
Salmonella typhimurium LT2 STM0068 -134 3.8 AAGCACGATATTGCTCACACTA
Citrobacter koseri ATCC BAA-895 CKO_03349 -144 3.8 AAGCACGATTTCGCTCACACTA
Position: -287
Score: 4.7
Sequence: TTATGTGATGCATTTCATACTG
Locus tag: Salmoneentericaenterica_010100024573
Salmoneentericaenterica_010100024573 -287 4.7 TTATGTGATGCATTTCATACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanE
Ortholog function: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Salmonella typhimurium LT2 STM3337 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Citrobacter koseri ATCC BAA-895 CKO_04626 -116 4.2 TTTAGTGAAGTAGATCGCACTC
Position: -84
Score: 4.6
Sequence: CATTGTGATTAGCCTCACATCT
Locus tag: Salmoneentericaenterica_010100024648
Salmoneentericaenterica_010100024648 -84 4.6 CATTGTGATTAGCCTCACATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galP
Ortholog function: sugar transporter
Escherichia coli str. K-12 substr. MG1655 b2943 -156 3.6 TATGATGATATAACTCAATTAT
-82 4.9 TGATGTGATTTGCTTCACATCT
Salmonella typhimurium LT2 STM3091 -83 4.6 CATTGTGATTAGCCTCACATCT
Citrobacter koseri ATCC BAA-895 CKO_04318 -83 5.3 TAACGTGATTCGAATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03376 -84 3.8 AGCCGTGATTATAGTCACGTTT
Enterobacter sp. 638 Ent638_3347 -171 3.9 TATTGGGATGCACATCAACTCT
-102 3.7 TAGTGTAACCGATTACACCAAT
-84 5.3 CAATGTGATTTATCTCACATAT
Erwinia amylovora ATCC 49946 EAM_2827 -152 4.1 TCATGTGATCTGTCGCACAGTC
Serratia proteamaculans 568 Spro_1160 -276 4.5 TGGTGTGATATCGGTTACATTT
-100 3.6 TTGTGTAATCGTTTCCACTAAT
-82 4.6 TAATGTGATCGCACTCACTTAC
Edwardsiella tarda EIB202 ETAE_2966 -275 3.7 CAAAGTGAAAACGATTACATTT
-61 4.5 TTATGTGATCATGCGCACTTTA
Position: -100
Score: 4.1
Sequence: TTGCGTGATCTGTCGCCCAAAT
Locus tag: Salmoneentericaenterica_010100024728
Salmoneentericaenterica_010100024728 -100 4.1 TTGCGTGATCTGTCGCCCAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acs
Ortholog function: acetyl-coenzyme A synthetase
Escherichia coli str. K-12 substr. MG1655 b4069 -100 4.1 TTGCGTGATCTGTCGCCCAAAT
Salmonella typhimurium LT2 STM4275 -100 4.1 TTGCGTGATCTGTCGCCCAAAT
Citrobacter koseri ATCC BAA-895 CKO_03816 -101 4.3 TTGCGTGATCTGCCGCGCAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04478 -101 3.9 TTGCGTGATCTGCCCCCCAATT
Enterobacter sp. 638 Ent638_0276 -101 4.1 TTGCGTGATCTGTCGCCCAAAT
Yersinia pestis KIM y0510 -97 4.2 ATACGTGATCTGCCGCCCAAAA
Serratia proteamaculans 568 Spro_0297 -97 4 TTGCGTGATCTGCCGCCCAAAA
Proteus mirabilis HI4320 PMI3037 -97 4.5 TTTCGTGATCTTATGCGCAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0074 -98 4.2 TTGCGTGATCTTCCGCGCAAAA
Position: -91
Score: 3.9
Sequence: ATATAAGAGCCAGCTCACAGTT
Locus tag: Salmoneentericaenterica_010100024803
Salmoneentericaenterica_010100024803 -91 3.9 ATATAAGAGCCAGCTCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tcyP
Ortholog function: L-cystine uptake protein TcyP
Escherichia coli str. K-12 substr. MG1655 b1729 -90 3.9 ATATAAGAGCCAGCTCACAGTT
Salmonella typhimurium LT2 STM1320 -91 3.9 ATATAAGAGCCAGCTCACAGTT
Citrobacter koseri ATCC BAA-895 CKO_01755 -90 3.7 ATATAAGAGGTCGGTCACAGTT
Yersinia pestis KIM y1878 -166 3.6 TGATTTGATTTAATACAAATCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2410 -176 3.7 TGACGTTATCTGCTGCACCCAT
Position: -7
Score: 3.6
Sequence: TATTGTTATGAACCGCACTAAC
Locus tag: Salmoneentericaenterica_010100024838
Salmoneentericaenterica_010100024838 -7 3.6 TATTGTTATGAACCGCACTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpp
Ortholog function: major outer membrane lipoprotein
Escherichia coli str. K-12 substr. MG1655 b1677 -56 3.6 TTGTGTAATACTTGTAACGCTA
Salmonella typhimurium LT2 STM1377 -56 3.6 TTGTGTAATACTTGTAACGCTA
Citrobacter koseri ATCC BAA-895 CKO_01710 -56 3.6 TTGTGTAATACTTGTAACGCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02134 -56 3.6 TTGTGTAATACTTGTAACGCTA
Enterobacter sp. 638 Ent638_1767 -56 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia amylovora ATCC 49946 EAM_1656 -56 3.6 TTGTGTAATACTTGTAACGCTA
Serratia proteamaculans 568 Spro_2186 -55 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1866 -56 3.6 TTGTGTAATACTTGTAACGCTA
Edwardsiella tarda EIB202 ETAE_1852 -55 3.6 TTGTGTAATACTTGTAACGCTA
Proteus mirabilis HI4320 PMI1409 -200 4.4 TTTTGTGAAATAACACGCATTT
Position: -56
Score: 3.6
Sequence: TTGTGTAATACTTGTAACGCTA
Locus tag: Salmoneentericaenterica_010100024843
Salmoneentericaenterica_010100024843 -56 3.6 TTGTGTAATACTTGTAACGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpp
Ortholog function: major outer membrane lipoprotein
Escherichia coli str. K-12 substr. MG1655 b1677 -56 3.6 TTGTGTAATACTTGTAACGCTA
Salmonella typhimurium LT2 STM1377 -56 3.6 TTGTGTAATACTTGTAACGCTA
Citrobacter koseri ATCC BAA-895 CKO_01710 -56 3.6 TTGTGTAATACTTGTAACGCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02134 -56 3.6 TTGTGTAATACTTGTAACGCTA
Enterobacter sp. 638 Ent638_1767 -56 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia amylovora ATCC 49946 EAM_1656 -56 3.6 TTGTGTAATACTTGTAACGCTA
Serratia proteamaculans 568 Spro_2186 -55 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1866 -56 3.6 TTGTGTAATACTTGTAACGCTA
Edwardsiella tarda EIB202 ETAE_1852 -55 3.6 TTGTGTAATACTTGTAACGCTA
Proteus mirabilis HI4320 PMI1409 -200 4.4 TTTTGTGAAATAACACGCATTT
Position: -82
Score: 4
Sequence: AAATGTGATCTGTGTTAGATCA
Locus tag: Salmoneentericaenterica_010100024923
Salmoneentericaenterica_010100024923 -82 4 AAATGTGATCTGTGTTAGATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: outer membrane protein W
Escherichia coli str. K-12 substr. MG1655 b1256 -166 4.9 AAAATTGATTTAAATCACATTA
-82 3.8 TAATGTGATCTATGTAGGATCA
Salmonella typhimurium LT2 STM1732 -82 4.2 AAATGTGATCTGTATTAGATCA
Citrobacter koseri ATCC BAA-895 CKO_01333 -82 3.9 TAATGTGATCTGTATTGGATCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01248 -101 3.9 CATTGCGATCGGTAGCAAAAAT
-45 4 TAGTGTGATCTAAAACAGATCA
Enterobacter sp. 638 Ent638_2283 -121 3.7 AAAATTAATCTGGATCAACAAA
Yersinia pestis KIM y2044 -69 3.9 AGATGTGATCTCGATTAGATCA
Serratia proteamaculans 568 Spro_2674 -135 3.8 TTTTTTGATTCAGATCAATCCT
Edwardsiella tarda EIB202 ETAE_1528 -161 3.9 CTGATTGATGTCTATCAAATTT
Proteus mirabilis HI4320 PMI1350 -168 4.6 AAATTTGATGTGGATCAATTAT
-85 3.8 AGTTGTGATCGGCATTAGATCA
Photorhabdus luminescens subsp. laumondii TTO1 plu2478 -164 4.3 AACTTTGATTTGGATCAAGTTA
-39 3.8 TATTTTGATTGACTTTAAATCA
Position: -61
Score: 3.7
Sequence: TTCTGTGACTGGCGTTACAATC
Locus tag: Salmoneentericaenterica_010100025303
Salmoneentericaenterica_010100025303 -61 3.7 TTCTGTGACTGGCGTTACAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgi
Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Salmonella typhimurium LT2 STM4221 -61 3.7 TTCTGTGACTGGCGTTACAATC
Citrobacter koseri ATCC BAA-895 CKO_03893 -61 4.1 TTTTGTGACTGGCGTTACAATC
Serratia proteamaculans 568 Spro_4477 -80 3.7 AAAAGAGATCATAATCACAGTC
Proteus mirabilis HI4320 PMI2754 -245 3.7 CAGTGAGATGTTAAACACAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4379 -205 3.8 TGACGCGATGAGAATCATAAAA
Position: -97
Score: 3.6
Sequence: TTCAGTGATATCCGTTAAAATT
Locus tag: Salmoneentericaenterica_010100025533
Salmoneentericaenterica_010100025533 -97 3.6 TTCAGTGATATCCGTTAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjtD
Ortholog function: RNA methyltransferase, TrmH family, group 1
Salmonella typhimurium LT2 STM4600 -97 3.6 TTCAGTGATATCAGTTAAAATT
Citrobacter koseri ATCC BAA-895 CKO_03386 -222 3.7 AGGTGTGATTCATTCTAAATTA
-53 4.2 TATGTTGACATTGGTCACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04857 -94 4 TTTAGTGATTTTTGTTGCAAAT
Enterobacter sp. 638 Ent638_0563 -54 4.3 TATGTTGAGGTGGATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3892 -83 3.7 AATCGTGATCGATTACACGTCC
Position: -250
Score: 4.2
Sequence: GAATGTGATCAATTTAAAAATT
Locus tag: Salmoneentericaenterica_010100025538
Salmoneentericaenterica_010100025538 -250 4.2 GAATGTGATCAATTTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Escherichia coli str. K-12 substr. MG1655 b0002 -83 3.8 TTTATTGACTTAGGTCACTAAA
Salmonella typhimurium LT2 STM0002 -103 4.2 GAATGTGATCAATTTAAAAATT
Citrobacter koseri ATCC BAA-895 CKO_03385 -249 4.1 GAATGTGATCAAATTAAAAATT
Enterobacter sp. 638 Ent638_0564 -252 4.4 AATTGTGATCAAATTAGAAATT
Proteus mirabilis HI4320 PMI0001 -232 3.9 AAATTTGACATCTCTCTCGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0563 -223 4.2 ATGTTTGACTTTGCGCACAAAT
Position: -129
Score: 4
Sequence: ATATGTGAAACAAGACATATTT
Locus tag: Salmoneentericaenterica_010100025633
Salmoneentericaenterica_010100025633 -129 4 ATATGTGAAACAAGACATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tsx
Ortholog function: Nucleoside-specific channel-forming protein Tsx precursor
Escherichia coli str. K-12 substr. MG1655 b0411 -250 3.7 TTTTGTTACTCTGCTTACATCA
-129 3.9 AACTGTGAAACGAAACATATTT
Salmonella typhimurium LT2 STM0413 -129 4 ATATGTGAAACAAGACATATTT
Citrobacter koseri ATCC BAA-895 CKO_02750 -131 3.7 ATCTGTGAAACAAGACATATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00363 -131 3.8 TTATGTGAAACAACACGTATTT
Enterobacter sp. 638 Ent638_0879 -124 4.1 ATATGTGAAACAACACATATTT
Erwinia amylovora ATCC 49946 EAM_2589 -218 5.3 ATTTGTGATAAAAATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3796 -172 5.5 TTATGTGATTAAAATCACATAA
Edwardsiella tarda EIB202 ETAE_2935 -245 4.6 TAATTTGATGAGAATCTCAATT
Position: -100
Score: 3.8
Sequence: AATTGAGACTTCCTTCAAACAC
Locus tag: Salmoneentericaenterica_010100026283
Salmoneentericaenterica_010100026283 -100 3.8 AATTGAGACTTCCTTCAAACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fsr
Ortholog function: fosmidomycin resistance protein
Escherichia coli str. K-12 substr. MG1655 b0479 -65 3.7 TAGTCTGGTAATAATCACAAAT
Salmonella typhimurium LT2 STM0493 -100 3.8 AATTGAGACTTCCTTCAAACAC
Citrobacter koseri ATCC BAA-895 CKO_02670 -102 3.8 AATTGAGACTTCCTTCAAACAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00460 -197 3.8 AATTGCGACTTCCTTCAAACCT
Enterobacter sp. 638 Ent638_0958 -92 4 AATTGCGACTTTCCTCAAATCT
Serratia proteamaculans 568 Spro_1146 -100 4.7 TTTTGCGATGTGCGTCAAATTA
Position: -93
Score: 4
Sequence: TTATCTGATTTTACTCCCACTT
Position: -9
Score: 3.5
Sequence: GAGTGTGATATGCATAAAACCA
Locus tag: Salmoneentericaenterica_010100026338
Salmoneentericaenterica_010100026338 -93 4 TTATCTGATTTTACTCCCACTT
-9 3.5 GAGTGTGATATGCATAAAACCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydgD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1598 -93 4 TTATCTGATTTTACTCCCACTT
Salmonella typhimurium LT2 STM1484 -93 4 TTATCTGATTTTACTCCCACTT
Citrobacter koseri ATCC BAA-895 CKO_01604 -95 4 TTATCTGATTTTACTCCCACTT
Enterobacter sp. 638 Ent638_1914 -53 4.1 TATTTTAATAGGGTTCACTTTT
Yersinia pestis KIM y2013 -160 3.6 TTTTTTTATTTATAGCACGAAC
Position: -201
Score: 4
Sequence: TGTTTTTACTTCACTCACATAA
Locus tag: Salmoneentericaenterica_010100026463
Salmoneentericaenterica_010100026463 -201 4 TGTTTTTACTTCACTCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rcsA
Ortholog function: Colanic acid capsular biosynthesis activation accesory protein RcsA, co-regulator with RcsB
Escherichia coli str. K-12 substr. MG1655 b1951 -201 4 TGTTTTAAGCTCACTCACATAT
Salmonella typhimurium LT2 STM1982 -201 4 TGTTTTTACTTCACTCACATAA
Citrobacter koseri ATCC BAA-895 CKO_00992 -200 4.1 TGTTTTTACCTTACTCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02421 -195 3.7 TGTTTTTAATTCGGTCACACTA
Enterobacter sp. 638 Ent638_2542 -206 4.3 TGTTTTTATGCCCTTCACAATA
Position: -104
Score: 4.4
Sequence: ATTTGTGATCGCACCCGCACTT
Locus tag: Salmoneentericaenterica_010100026645
Salmoneentericaenterica_010100026645 -104 4.4 ATTTGTGATCGCACCCGCACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ychH
Ortholog function: membrane protein
Escherichia coli str. K-12 substr. MG1655 b1205 -105 4.5 AATTGTGATCACGCCCGCACAT
Salmonella typhimurium LT2 STM1782 -105 4.4 ATTTGTGATCGCACCCGCACTT
Citrobacter koseri ATCC BAA-895 CKO_01260 -104 4.1 AATTGTGATCGCCCACGCACTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02241 -100 4.1 TAATGTGATCGTGGACGCACTC
Enterobacter sp. 638 Ent638_2343 -119 3.7 TGTTGTGACGAGAGTCATTAAT
-101 4 TAATGTGATCATTCACGCAACT
Erwinia amylovora ATCC 49946 EAM_1581 -97 3.9 AAATGTGATCGCTGACTCATCA
Yersinia pestis KIM y2296 -145 3.9 AGTTGTGATCGCTACCGCAACA
Serratia proteamaculans 568 Spro_1985 -117 4.2 ATTTGTGATCGCCTACGCAATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2185 -275 3.6 TAGCGTGATTATGAGAACGCTA
-117 3.8 ATCTGTGATCCCTCCCGCAATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2065 -189 4.1 AGTTGTGATCGTGTCCGCAATG
Position: -347
Score: 4.4
Sequence: TGGCGTGACAATGATCACATAA
Position: -53
Score: 3.5
Sequence: GGCTGTGATCCATTTATCAAAA
Position: -2
Score: 3.5
Sequence: AAATGTTATTTAGTATACAGCT
Locus tag: Salmoneentericaenterica_010100026975
Salmoneentericaenterica_010100026975 -347 4.4 TGGCGTGACAATGATCACATAA
-53 3.5 GGCTGTGATCCATTTATCAAAA
-2 3.5 AAATGTTATTTAGTATACAGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuB
Ortholog function: C4-dicarboxylate transporter DcuB
Escherichia coli str. K-12 substr. MG1655 b4123 -53 3.5 GACTGTGATCTATTCAGCAAAA
Salmonella typhimurium LT2 STM4301 -53 3.5 GGCTGTGATCCATTTATCAAAA
Citrobacter koseri ATCC BAA-895 CKO_03748 -52 3.9 GACTGTGATCTATTTATCAAAA
Enterobacter sp. 638 Ent638_2479 -81 3.3 AAATCTGATCTGGCTCCCAGCC
Serratia proteamaculans 568 Spro_3863 -77 3.6 GTTTGTGATCGCTATCCCTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1533 -296 3.5 TATTGCGAGCGAGATCTTTTAT
-247 3.5 TTAATAGATTTAGATCAAGAAA
Edwardsiella tarda EIB202 ETAE_2844 -194 3.6 ATACTTTATTCAGATCAATTTT
Proteus mirabilis HI4320 PMI0389 -138 3.3 AACTATAACAACGATCAAAAAA
Position: -143
Score: 4.3
Sequence: AATTGTGACAGAGTGCAAATTC
Locus tag: Salmoneentericaenterica_010100027300
Salmoneentericaenterica_010100027300 -143 4.3 AATTGTGACAGAGTGCAAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: malT
Ortholog function: transcriptional regulator MalT
Escherichia coli str. K-12 substr. MG1655 b3418 -142 4.3 AATTGTGACACAGTGCAAATTC
Salmonella typhimurium LT2 STM3515 -143 4.3 AATTGTGACAGAGTGCAAATTC
Citrobacter koseri ATCC BAA-895 CKO_04840 -142 4.3 AATTGTGACAGAGTGCAAATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03788 -142 4.4 ATTTGTGACATAGAGCAAATTC
Enterobacter sp. 638 Ent638_3831 -142 4.6 AATTGTGACAGAGTGCAAATTA
Yersinia pestis KIM y3900 -202 4.6 AATTGTGATCCGTAGCAACTTA
Serratia proteamaculans 568 Spro_4637 -203 4 AAGTGTGATCAATAGCAATATA
Edwardsiella tarda EIB202 ETAE_3303 -212 3.8 AAATGTGATCAGCCGCAATTTC
Position: -104
Score: 4.7
Sequence: TAGAGTGATATGTATAACATTA
Locus tag: Salmoneentericaenterica_010100027315
Salmoneentericaenterica_010100027315 -104 4.7 TAGAGTGATATGTATAACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpE
Ortholog function: thiosulfate sulfurtransferase
Escherichia coli str. K-12 substr. MG1655 b3425 -95 4.7 TAGAGTGATATGTATAACATTA
Salmonella typhimurium LT2 STM3525 -104 4.7 TAGAGTGATATGTATAACATTA
Citrobacter koseri ATCC BAA-895 CKO_04844 -108 4.6 TAGAGTGATACATATAACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03791 -107 4.3 TGAAGTGATGGGTGTAACATAT
Enterobacter sp. 638 Ent638_3834 -257 3.8 ATGTTCGATATCGCTCATAATA
-196 4.6 TTGAGTGATAGAGATAACATAA
Erwinia amylovora ATCC 49946 EAM_3264 -134 3.9 ATGCGTGATGCCGATAACGTCT
Photorhabdus luminescens subsp. laumondii TTO1 plu0197 -102 3.6 TAACGTATTACTGATAACAAAT
Position: -116
Score: 4.4
Sequence: TAATGTTATACATATCACTCTA
Locus tag: Salmoneentericaenterica_010100027320
Salmoneentericaenterica_010100027320 -116 4.4 TAATGTTATACATATCACTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -116 4.4 TAATGTTATACATATCACTCTA
Salmonella typhimurium LT2 STM3526 -116 4.4 TAATGTTATACATATCACTCTA
Citrobacter koseri ATCC BAA-895 CKO_04845 -116 4.5 TAATGTTATATGTATCACTCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -119 3.7 ATATGTTACACCCATCACTTCA
-58 3.7 TATAGTGAGCGATATCGAGCAT
Enterobacter sp. 638 Ent638_3835 -116 4.4 TTATGTTATCTCTATCACTCAA
-55 4 TATTATGAGCGATATCGAACAT
Erwinia amylovora ATCC 49946 EAM_3265 -124 4 AGACGTTATCGGCATCACGCAT
Yersinia pestis KIM y3891 -129 4.4 AAATGTTACCTCCATCACGCAT
Serratia proteamaculans 568 Spro_4642 -129 3.6 AACTGTTACCTCTATCACGCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -144 4.3 TAATGTGACAACTATCATCATA
-124 4.4 TATTGTTAGCTTCATCACGCAT
Edwardsiella tarda EIB202 ETAE_3312 -124 4.3 TTGTGTTATCCGCATCGCGTAA
Proteus mirabilis HI4320 PMI2930 -129 4.4 AATTGTTATTTATATCACGCAG
Position: -153
Score: 3.9
Sequence: TGCGGTGATCTGGATCACGTTC
Locus tag: Salmoneentericaenterica_010100027475
Salmoneentericaenterica_010100027475 -153 3.9 TGCGGTGATCTGGATCACGTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: garD
Ortholog function: D-galactarate dehydratase
Escherichia coli str. K-12 substr. MG1655 b3128 -210 4.2 TATTTTGAGCATATGCACATAA
-127 4.4 ATGATTGACATTGATCACATTT
-52 3.7 AAATGAGACCAGGTCCTCATTT
Salmonella typhimurium LT2 STM3250 -153 4.3 TGCGGTGATCTGGATCACATTC
Citrobacter koseri ATCC BAA-895 CKO_04527 -54 4 AGTTGTTCTCTTTAACACATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03540 -125 4.8 AGGAGTGATGCCGATCACATTT
Enterobacter sp. 638 Ent638_3570 -143 4.7 AGGGGTGATCTTGATCACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3578 -296 4.2 TAGTGCGAGGTATTTCACGAAA
-204 5.1 AAATGTGATCAAACTCACCAAA
Position: -188
Score: 3.9
Sequence: TTTTTTGATTGAAATCAGGCTA
Position: -83
Score: 4.7
Sequence: ATTTGTGAGTGGTCGCACATAA
Locus tag: Salmoneentericaenterica_010100027495
Salmoneentericaenterica_010100027495 -188 3.9 TTTTTTGATTGAAATCAGGCTA
-83 4.7 ATTTGTGAGTGGTCGCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tdcA
Ortholog function: Threonine catabolic operon transcriptional activator TdcA
Escherichia coli str. K-12 substr. MG1655 b3118 -225 4 TGATGTTATCGCCATAAAATAT
-82 4.7 ATTTGTGAGTGGTCGCACATAT
Salmonella typhimurium LT2 STM3245 -188 3.9 TTTTTTGATTGAAATCAGGCTA
-83 4.7 ATTTGTGAGTGGTCGCACATAA
Citrobacter koseri ATCC BAA-895 CKO_04518 -225 4.3 ATATGTTATCGCCATAAAATAT
-187 3.9 TTTTTTGACAAAAATCATGATA
-82 4.6 ATTTGTGAGTAGTCGCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02296 -82 4.6 CTTTGTGAGAGCTCTCACATAA
-54 3.7 AATTGCGATTTGTTACACTTTC
Enterobacter sp. 638 Ent638_3565 -82 3.9 ATTTGTGAGTAACAGCACATCC
Position: -154
Score: 4.4
Sequence: AAACGTGATAGCCGTCAAACAA
Locus tag: Salmoneentericaenterica_010100027790
Salmoneentericaenterica_010100027790 -154 4.4 AAACGTGATAGCCGTCAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptsG
Ortholog function: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b1101 -154 4.4 AAACGTGATAGCCGTCAAACAA
Salmonella typhimurium LT2 STM1203 -155 4.4 AAACGTGATAGCCGTCAAACAA
Citrobacter koseri ATCC BAA-895 CKO_01957 -229 4.4 AAACGTGATAGCCGTCAAACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01099 -155 4.4 AAACGTGATAGCCGTCAAACAA
Enterobacter sp. 638 Ent638_1616 -155 4.4 AAACGTGATAGCCGTCAAACAA
Erwinia amylovora ATCC 49946 EAM_1466 -162 4.6 AAACGTGATAGCCATCAAACAA
Yersinia pestis KIM y1767 -166 4.4 AAACGTGACGGCAATCAAACAT
Serratia proteamaculans 568 Spro_1914 -164 4.4 AAACGTGACTGTCATCAAACAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1805 -162 4.6 AAACGTGATAGCAATCAAACAT
Proteus mirabilis HI4320 PMI2292 -156 4.5 AAACGTGACAGCTATCATATAT
Position: -4
Score: 3.9
Sequence: TAATATGATAGTTGTCGAACTT
Locus tag: Salmoneentericaenterica_010100028125
Salmoneentericaenterica_010100028125 -4 3.9 TAATATGATAGTTGTCGAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuA
Ortholog function: anaerobic C-4-dicarboxylate symporter
Salmonella typhimurium LT2 STM4325 -209 4.2 AGCGGTGACCTATTTCACAAAA
-159 4.2 TTAAGTGATCCAGATTACGGTA
Citrobacter koseri ATCC BAA-895 CKO_03697 -54 4.2 AGCGGTGACCTATTTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04528 -204 3.9 AGCGGTGACCCATTTCACAGAT
-154 3.8 ATAAGTGATCAAGCTTACTGAT
Enterobacter sp. 638 Ent638_0325 -205 4.1 AGCGGTGATTCATTTCACAGAT
Erwinia amylovora ATCC 49946 EAM_0415 -228 4.2 CAATGTGACCTGGAACAGATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0620 -272 4 ACTCGTGACTACAATCACAGTT
Position: -153
Score: 4
Sequence: TAAAATGAACCATATCGCAAAA
Position: -123
Score: 4.2
Sequence: ATATTAGATGGAAATCACATAG
Locus tag: Salmoneentericaenterica_010100028836
Salmoneentericaenterica_010100028836 -153 4 TAAAATGAACCATATCGCAAAA
-123 4.2 ATATTAGATGGAAATCACATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: dsdX
Ortholog function: DsdX permease
Escherichia coli str. K-12 substr. MG1655 b2365 -154 4.4 TAAAGTGAACCATATCTCAATT
Salmonella typhimurium LT2 STM3801 -153 4 TAAAATGAACCATATCGCAAAA
-123 4.2 ATATTAGATGGAAATCACATAG
Citrobacter koseri ATCC BAA-895 CKO_00020 -124 4 TTATTGGATGCAAATCACCCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04080 -152 4.3 TAATTTGACCCATAGCATATTT
-122 3.7 CTTTTAGAGCTAAATCACCTTT
Position: -128
Score: 3.8
Sequence: TGATGTAAATTGAATCAACTAT
Position: -110
Score: 4.5
Sequence: CTATGTGATTTCCATCTAATAT
Position: -80
Score: 4.2
Sequence: TTTTGCGATATGGTTCATTTTA
Locus tag: Salmoneentericaenterica_010100028841
Salmoneentericaenterica_010100028841 -128 3.8 TGATGTAAATTGAATCAACTAT
-110 4.5 CTATGTGATTTCCATCTAATAT
-80 4.2 TTTTGCGATATGGTTCATTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dsdC
Ortholog function: DNA-binding transcriptional dual regulator
Escherichia coli str. K-12 substr. MG1655 b2364 -115 3.9 TGGAGTGATTTACATCTAAAAA
-85 4.6 AATTGAGATATGGTTCACTTTA
Salmonella typhimurium LT2 STM3800 -142 3.8 TGATGTAAATTGAATCAACTAT
-124 4.5 CTATGTGATTTCCATCTAATAT
-94 4.2 TTTTGCGATATGGTTCATTTTA
Citrobacter koseri ATCC BAA-895 CKO_00019 -32 3.9 AAGGGTGATTTGCATCCAATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04079 -125 3.9 AAAGGTGATTTAGCTCTAAAAG
-95 4.2 AAATATGCTATGGGTCAAATTA
Serratia proteamaculans 568 Spro_2451 -76 3.6 TTTAGCGACATGGGTCAACTTT
Proteus mirabilis HI4320 PMI0184 -199 3.6 TATTGTTAAACATATTGAATAT
-117 4.4 ATAGGTGATCAGATGCACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1968 -124 4.4 TTCAGTGATACCGATCAAAATT
-94 4.5 ATTTGCGATTTAAATCACTAAA
Position: -124
Score: 4.7
Sequence: TTTTGTGATGCGGCGCATAAAT
Locus tag: Salmoneentericaenterica_010100029096
Salmoneentericaenterica_010100029096 -124 4.7 TTTTGTGATGCGGCGCATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiH
Ortholog function: putative transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b0796 -123 4.5 TTTTGTGACGCAGCGCATAAAT
Salmonella typhimurium LT2 STM0819 -124 4.7 TTTTGTGATGCGGCGCATAAAT
Citrobacter koseri ATCC BAA-895 CKO_02331 -124 4.5 TTTTGTGACATACCGCATAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00824 -224 3.6 AAATGAAACGGTATTCAAAAAA
-118 4.7 AATTGTTAAGCCCATCACAAAT
Enterobacter sp. 638 Ent638_1287 -126 4.4 TTTTGTGACACGGCGCATAAAA
Serratia proteamaculans 568 Spro_1330 -146 4.6 TTAAGTGACGCAGAGCACAATA
Proteus mirabilis HI4320 PMI0619 -160 3.6 AATTTTTAAATAAATCATGTTT
Position: -97
Score: 4.7
Sequence: AAAGGTGATGGATATCACAAAC
Locus tag: Salmoneentericaenterica_010100029286
Salmoneentericaenterica_010100029286 -97 4.7 AAAGGTGATGGATATCACAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeaQ
Ortholog function: Transglycosylase associated protein
Escherichia coli str. K-12 substr. MG1655 b1795 -98 4.2 CTCCGTGATGCTCGTCACAAAT
Citrobacter koseri ATCC BAA-895 CKO_01818 -97 4.9 AAAAGTGACATTTATCACAAAT
Enterobacter sp. 638 Ent638_1658 -245 3.7 CAATGTGAGCAATGTCGTACTA
-101 4.8 CACTGTGATACCTATCACAAAT