Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RhaS regulog to Pantoea ananatis LMG 20103

Reference regulog properties
Source regulog: RhaS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Propagated regulon:
Target genome Pantoea ananatis LMG 20103
Orthologous TF(s) PANA_2439
Regulated genes 3
Built upon 31 sites [see more]
Predicted regulatory interactions in Pantoea ananatis LMG 20103
Locus tag Position Score Sequence
Position: -157
Score: 10.3
Sequence: TTCTTCCCTTCCCTGCCA-(15)-TGGCAAAGATAAAAAGGT
Locus tag: PANA_2443
PANA_2443 -157 10.3 TTCTTCCCTTCCCTGCCA-(15)-TGGCAAAGATAAAAAGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aldA
Ortholog function: Aldehyde dehydrogenase A (EC 1.2.1.22)
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0118 -279 10.1 ATCATGACTTTTTTGCCA-(15)-TGGCAGCTATGAAAAGGT
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