Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Pantoea ananatis LMG 20103

Reference regulog properties
Source regulog: Zur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Pantoea ananatis LMG 20103
Orthologous TF(s) PANA_0259
Regulated genes 7
Built upon 65 sites [see more]
Predicted regulatory interactions in Pantoea ananatis LMG 20103
Locus tag Position Score Sequence
Position: -119
Score: 6
Sequence: TAGTTGTTATGTTATAACATTTT
Locus tag: PANA_1016
PANA_1016 -119 6 TAGTTGTTATGTTATAACATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuC2
Ortholog function: putative zinc ABC transporter, ATP-binding protein
Citrobacter koseri ATCC BAA-895 CKO_04054 -141 6.1 TTATTGTTATGTTATAACATTTT
Citrobacter koseri ATCC BAA-895 CKO_00951 -45 5.7 CATTTGTTATGTTATAACGTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03035 -108 6 TTATTGTTATGTTATAACATTAA
Enterobacter sp. 638 Ent638_3178 -140 5.9 TTAGTGTTATGTTATAACATTAT
Serratia proteamaculans 568 Spro_1121 -185 5.8 GTGATGTTATAATGTAACACTTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3756 -123 6.5 GATATGTTATAATATAACAATTA
Position: -27
Score: 6.2
Sequence: ATATTGTTATAGTATAACATTAC
Locus tag: PANA_1020
PANA_1020 -27 6.2 ATATTGTTATAGTATAACATTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmE2
Ortholog function: 50S ribosomal protein L31 paralog
Escherichia coli str. K-12 substr. MG1655 b0296 -34 5.6 TTATGGTTATGTTATAACATAAC
Salmonella typhimurium LT2 STM0469 -35 5.8 TTATTGTTATGTTATAACATAAT
Citrobacter koseri ATCC BAA-895 CKO_02696 -35 5.5 TTATTGTTACGTTATAACATAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00435 -35 5.5 TTATTGTTATGTTATAACGTAAT
Enterobacter sp. 638 Ent638_0934 -37 5.6 CTTTTGTTATGTTATAACAAAAC
Erwinia amylovora ATCC 49946 EAM_1015 -36 6 TTTTGGTTATATTATAACATATC
Yersinia pestis KIM y1048 -36 5.9 ATGATGTTACATTATAACATACT
Serratia proteamaculans 568 Spro_1125 -36 6.2 TTATTGTTATAGTATAACATTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1168 -31 6 GATATGTTATAACATAACAATTG
Proteus mirabilis HI4320 PMI3379 -38 6.5 ATATTGTTATATTATAACATTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0036 -32 6.2 GTAATGTTATATTATTACAATTT
Position: -52
Score: 6.1
Sequence: CGAATGTTATAATATCACATCCA
Locus tag: PANA_2197
PANA_2197 -52 6.1 CGAATGTTATAATATCACATCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: high-affinity zinc ABC transporter, substrate-binding protein
Escherichia coli str. K-12 substr. MG1655 b1857 -52 6.5 GAAATGTTATAATATCACACTTC
Salmonella typhimurium LT2 STM1891 -52 6.6 AGAATGTTATAATATCACATTTC
Citrobacter koseri ATCC BAA-895 CKO_01106 -37 6.6 AGAATGTTATAATATCACATTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02372 -100 6.3 TGAATGTTATAATATCACATCAC
Enterobacter sp. 638 Ent638_2426 -52 6.1 CGAATGTTATAATATCACATCCA
Erwinia amylovora ATCC 49946 EAM_2000 -52 5.9 CAAATGTTATAATATCACAAAAT
Yersinia pestis KIM y2249 -51 5.6 TGAATGTTATAATATTACGCTTT
Serratia proteamaculans 568 Spro_2773 -51 5.7 CGAATGTTATAATATCACGCCTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2484 -53 6.3 GTAATGTTATAATATAACAAACA
Edwardsiella tarda EIB202 ETAE_1443 -50 6.6 GGAATGTTATAATATAACGTTTC
Proteus mirabilis HI4320 PMI1152 -50 6.7 GAAACGTTATAATATAACATTTC
Photorhabdus luminescens subsp. laumondii TTO1 plu2115 -51 6.6 GAGATGTTATAATATAACAATTC
Position: -30
Score: 6.2
Sequence: TGGATGTGATATTATAACATTCG
Locus tag: PANA_2198
PANA_2198 -30 6.2 TGGATGTGATATTATAACATTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuC
Ortholog function: high-affinity zinc ABC transporter, ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b1858 -49 6.5 GAAGTGTGATATTATAACATTTC
Salmonella typhimurium LT2 STM1892.S -49 6.7 GAAATGTGATATTATAACATTCT
Citrobacter koseri ATCC BAA-895 CKO_01105 -49 6.7 GAAATGTGATATTATAACATTCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02373 -49 6.4 GTGATGTGATATTATAACATTCA
Enterobacter sp. 638 Ent638_2427 -48 6.2 TGGATGTGATATTATAACATTCG
Erwinia amylovora ATCC 49946 EAM_2001 -48 6.1 ATTTTGTGATATTATAACATTTG
Yersinia pestis KIM y2250 -47 5.7 AAAGCGTAATATTATAACATTCA
Serratia proteamaculans 568 Spro_2774 -50 5.8 GAGGCGTGATATTATAACATTCG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2485 -46 6.4 TGTTTGTTATATTATAACATTAC
Edwardsiella tarda EIB202 ETAE_1442 -72 6.7 GAAACGTTATATTATAACATTCC
Proteus mirabilis HI4320 PMI1151 -47 6.7 GAAATGTTATATTATAACGTTTC
Photorhabdus luminescens subsp. laumondii TTO1 plu2114 -48 6.6 GAATTGTTATATTATAACATCTC
Position: -41
Score: 5.4
Sequence: TCATTGTTATGTTATAACGTAAC
Locus tag: PANA_2337
PANA_2337 -41 5.4 TCATTGTTATGTTATAACGTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA4254
Ortholog function: predicted zinc-regulated ABC transporter, ATP-binding protein
Citrobacter koseri ATCC BAA-895 CKO_00850 -29 6.1 TAATTGTTATGATATAACATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4254 -55 5.4 AATTTGGTATGTTATAACATACC
Position: -21
Score: 5.5
Sequence: GGAACGTTACTTTATAACATTAT
Locus tag: PANA_2874
PANA_2874 -21 5.5 GGAACGTTACTTTATAACATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA3248
Ortholog function: ABC-type uncharacterized transport system, periplasmic component
Yersinia pestis KIM y1329 6 5.1 TATGTGTTACATTATAACGGTTT
Serratia proteamaculans 568 Spro_3632 -3 5.3 TTTATGTTACTTTATAACAATAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3248 -3 5.7 ATAATGTTACATTATAACGCTTT
Proteus mirabilis HI4320 PMI1519 -42 6.1 GTGATGTTATATTATAACAAAAT
Position: -186
Score: 5.9
Sequence: GAAATATTATGTTATAACATATC
Position: -50
Score: 5.7
Sequence: ATTTTGTTATGTTATAACATATT
Locus tag: PANA_4184
PANA_4184 -186 5.9 GAAATATTATGTTATAACATATC
-50 5.7 ATTTTGTTATGTTATAACATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative zinc chaperone, COG0523 family
Citrobacter koseri ATCC BAA-895 CKO_00925 -25 5.6 TTATTGTTACGTTATAACATAAC
Serratia proteamaculans 568 Spro_2626 -69 5.8 GATATGTTATAACATAACAAAAT