Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of IscR regulog to Yersinia pestis biovar Antiqua str. UG05-0454

Reference regulog properties
Source regulog: IscR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis biovar Antiqua str. UG05-0454
Orthologous TF(s) YpUG050454_1495
Regulated genes 3
Built upon 45 sites [see more]
Predicted regulatory interactions in Yersinia pestis biovar Antiqua str. UG05-0454
Locus tag Position Score Sequence
Position: -37
Score: 6.3
Sequence: ATAACCGACAAGAGTAGTCAACTAT
Locus tag: YpUG050454_0532
YpUG050454_0532 -37 6.3 ATAACCGACAAGAGTAGTCAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nfuA
Ortholog function: NfuA Fe-S protein maturation
Escherichia coli str. K-12 substr. MG1655 b3414 -37 6.9 ATAACCAACTAAAATAGTCAACTAT
Salmonella typhimurium LT2 STM3511 -37 6.9 ATAACCAACTAAAATAGTCAACTAT
Citrobacter koseri ATCC BAA-895 CKO_04835 -37 6.7 ATAACCAAGTAAAATAGTCAACTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03784 -37 6.5 ATAACCCAGTAAAATAGTCAACTAT
Enterobacter sp. 638 Ent638_3827 -37 6.1 ATACCCAAGTATTTTAGTCAACTAT
Erwinia amylovora ATCC 49946 EAM_3259 -37 6.7 ATAACCAACTGAATTAGTCAACTAT
Yersinia pestis KIM y3903 -37 6.3 ATAACCGACAAGAGTAGTCAACTAT
Serratia proteamaculans 568 Spro_4634 -46 5.7 ATAACCTAGTATAGAAGTCAACTAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4134 -38 5.6 ATAACCGATAAGTGCAGTCAACTAT
Edwardsiella tarda EIB202 ETAE_3288 -37 5.9 ATAACCGACCGGAGAAGTCAACTAT
Proteus mirabilis HI4320 PMI2926 -38 6.3 ATAACCAACCAGAACAGTCAACTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu0198 -37 6.3 ATAACCAACTATAGCAGTCAACTAT
Position: -118
Score: 6
Sequence: GTACTTGAATGAAATACTCAGGTAT
Locus tag: YpUG050454_0900
YpUG050454_0900 -118 6 GTACTTGAATGAAATACTCAGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: erpA
Ortholog function: ErpA, essential respiratory protein A / probable iron binding protein from the HesB_IscA_SufA family
Escherichia coli str. K-12 substr. MG1655 b0156 -89 4.9 ATACTTGAACGAAATACCAGGGTAT
Salmonella typhimurium LT2 STM0204.S -89 4.9 ATACTTGAACGAATTACCAGGGTAT
Citrobacter koseri ATCC BAA-895 CKO_03211 -88 5.2 ATACTTGAATGAAATACCAGGGTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00171 -89 4.7 ATACTTGAACGATTTACCAGGGTAT
Enterobacter sp. 638 Ent638_0696 -87 5.1 ATACTTGAATGAATTACCAGGGTAT
Yersinia pestis KIM y0801 -103 6 GTACTTGAATGAAATACTCAGGTAT
Serratia proteamaculans 568 Spro_0783 -97 5.5 ATACTTGAACGCAACACTCAGGTAT
Edwardsiella tarda EIB202 ETAE_2776 -99 5.8 ATACTTGAATGGATTACTCGGGTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu0904 -105 5.2 AAACTTGAACGAACTAATCAGGTAT
Position: -67
Score: 6.6
Sequence: ATAGTTGACTAAAACACTCAAGAAT
Locus tag: YpUG050454_1495
YpUG050454_1495 -67 6.6 ATAGTTGACTAAAACACTCAAGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iscR
Ortholog function: Iron-sulfur cluster regulator IscR
Escherichia coli str. K-12 substr. MG1655 b2531 -133 6.7 ATACCCGACTAAATCAGTCAAGTAA
-108 5.8 ATAGTTGACCAATTTACTCGGGAAT
Salmonella typhimurium LT2 STM2544 -132 6.5 ATACCTGACTAATTTACTCAAGTAA
-107 6.1 ATAGTTGACCAAATTACTCGGGAAT
Citrobacter koseri ATCC BAA-895 CKO_00250 -132 6.8 ATACCTGACTAAATTAGTCAAGTAA
-107 6 ATAGTTGACTGATTTAGTCGGGAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02863 -127 6.8 ATACCTGACTAAAACAGTCAAGTAA
-102 6.1 ATAGTTGACCAAATTACTCGGGAAT
Enterobacter sp. 638 Ent638_3028 -131 6.8 ATACCTGACTAAAACAGTCAAGTAA
-106 5.9 ATAGTTGACCAATTTAGTCGGGAAT
Erwinia amylovora ATCC 49946 EAM_2493 -138 4.9 ATAGTTGAGTAAATTACCAGGTTAA
-88 5.9 ATACTTGACCAATTTACTCGGGAAT
Yersinia pestis KIM y1333 -29 5.3 ATAGTTGAGTGAATTACTAGGTTAA
-4 6.6 ATAGTTGACTAAAACACTCAAGAAT
Serratia proteamaculans 568 Spro_3628 -94 5.4 ATACTTGAGTAAATTACTAGGTTAA
-69 6.2 ATAGTTGACTGATTTACTCAGGAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3238 -105 5.2 ATACTTGAGTGTTTTACTCGGTTAA
-80 6.2 ATAGTTGACTAAAACACTCGGGAAT
Edwardsiella tarda EIB202 ETAE_2816 -114 5.7 ATACCTGACTAAAATAGTAGGATAA
-89 6.6 ATAGTTGACTGAAATAGTCAGGAAT
Proteus mirabilis HI4320 PMI1861 -88 6.2 ATACCTGACTAAAACACTCAGATAA
-63 6.6 ATAGTTGACTAAATTACTCAGGAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3284 -90 5.4 ATAGTTGAGTAAATTACTAGGTTAA
-65 6.6 ATAGTTGACTAAAATACTCAGGAAT
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