Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RhaR regulog to Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537

Reference regulog properties
Source regulog: RhaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537
Orthologous TF(s) Salentericaenterica_010100019632
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537
Locus tag Position Score Sequence
Position: -232
Score: 10.5
Sequence: ACCTTCTCGTTACTGACA-(14)-TGGCAACAAGGCAAAGAT
Locus tag: Salentericaenterica_010100019642
Salentericaenterica_010100019642 -232 10.5 ACCTTCTCGTTACTGACA-(14)-TGGCAACAAGGCAAAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaS
Ortholog function: L-rhamnose operon transcriptional activator RhaS, AraC family
Citrobacter koseri ATCC BAA-895 CKO_03099 -108 10.2 TTCTTGAAAAAACGACC-(17)-CGTTAAAAATTTAAGGT
Enterobacter sp. 638 Ent638_4066 Error

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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