Propagation of KdgR regulog to Escherichia coli O157:H7 str. EC508
| Source regulog: | KdgR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | IclR |
| Regulation mode: | repressor (activator) |
| Biological process: | Pectin and polygalacturonate utlization |
| Effector: | 2-keto-3-deoxygluconate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Escherichia coli O157:H7 str. EC508 |
| Orthologous TF(s) | EcolO_010100030411 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -64
Score: 5.4 Sequence: ATAAAAAACGGCGTTTCATAA
Locus tag: EcolO_010100002927
|
||||
| EcolO_010100002927 | -64 | 5.4 | ATAAAAAACGGCGTTTCATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygjV | ||||
| Ortholog function: putative transport protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3090 | -64 | 5.4 | ATAAAAAACGGCGTTTCATAA |
| Yersinia pestis KIM | y3597 | -133 | 5.2 | ATATGAAACGGTGTTCTGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0648 | -70 | 6.2 | AAATAAAACGGCGTTTCATTT |
|
Position: -35
Score: 6.1 Sequence: AAATGAAACATTGTTTTAATT
Locus tag: EcolO_010100003680
|
||||
| EcolO_010100003680 | -35 | 6.1 | AAATGAAACATTGTTTTAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjgK | ||||
| Ortholog function: cytoplasmic protein involved in polygalacturonate utilization | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4252 | -35 | 6 | AAATGAAACGTTGTTTTAATT |
| Salmonella typhimurium LT2 | STM4468 | -32 | 5.7 | AAATAAAACGCTGTTTTAACT |
| Citrobacter koseri ATCC BAA-895 | CKO_03553 | -33 | 6.2 | AAATGAAACGTTGTTTTATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04658 | -33 | 5.8 | AAATGAAATGCTGTTTTATAT |
| Enterobacter sp. 638 | Ent638_0453 | -34 | 6 | AAATGAAACATTGTTTTATAT |
| Yersinia pestis KIM | y0739 | -41 | 5.9 | TAATAAAACAGCATTTCATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0383 | -41 | 5.1 | TTGTAAAACAGGGTTTCATTT |
| Edwardsiella tarda EIB202 | ETAE_3112 | -39 | 5.6 | AAATAAAACGCAGTTTTATAA |
|
Position: -130
Score: 6.3 Sequence: AAATGAAACATTGTTTTATTT
Position: -63
Score: 5.4 Sequence: AAACGAAACAGTGTTTCACTA
Locus tag: EcolO_010100014596
|
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| EcolO_010100014596 | -130 | 6.3 | AAATGAAACATTGTTTTATTT | |
| -63 | 5.4 | AAACGAAACAGTGTTTCACTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kduI | ||||
| Ortholog function: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2843 | -130 | 6.3 | AAATGAAACATTGTTTTATTT |
| -63 | 5.4 | AAACGAAACAGTGTTTCACTA | ||
| Salmonella typhimurium LT2 | STM3018 | -123 | 6.2 | AAATGAAACGTTGTTTTATTT |
| -58 | 5.3 | AATCAAAACAGTGTTTTGATT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04220 | -119 | 6.2 | AAATGAAACAACGTTTTATTT |
| -51 | 4.4 | AAACGGAACGGTGTTTCGCCT | ||
| Enterobacter sp. 638 | Ent638_3296 | -127 | 5.4 | AACTGAAACAACGTTTTAAAT |
| -60 | 5 | AATCGGAACATTGTTTCGTTA | ||
| Yersinia pestis KIM | y1887 | -201 | 6 | TAATAAAACATCATTTCATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2400 | -209 | 6.1 | AAATAAAACATTATTTCATTT |
| Edwardsiella tarda EIB202 | ETAE_1898 | -129 | 5.6 | AATCAAAACAGCATTTCATTT |