Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RhaS regulog to Salmonella enterica subsp. arizonae serovar 62:z4,z23:--

Reference regulog properties
Source regulog: RhaS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Propagated regulon:
Target genome Salmonella enterica subsp. arizonae serovar 62:z4,z23:--
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 31 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. arizonae serovar 62:z4,z23:--
Locus tag Position Score Sequence
Position: -221
Score: 8.9
Sequence: TCCTTTGCATTAGTGCCA-(14)-TGTCGTTATTATGAAGGC
Locus tag: SARI_03596
SARI_03596 -221 8.9 TCCTTTGCATTAGTGCCA-(14)-TGTCGTTATTATGAAGGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaT
Ortholog function: L-rhamnose:proton symporter
Citrobacter koseri ATCC BAA-895 CKO_03094 -126 8.5 ATAACGTGCTGGTTGCCA-(15)-CGGCAATCCTCAAAAGGT
Enterobacter sp. 638 Ent638_4064 -127 8.3 TTAACGCGTTGATTGCCA-(15)-CGGCAACCTTCTGAAGGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0450 -171 8.4 ACCTTCAAACCGATGCCG-(15)-TGGCACGCATCTGAAGGT
Escherichia coli str. K-12 substr. MG1655 b3907 -123 9.3 TTAATGCCGTGATTGCCA-(15)-CGGCAACAGGCGAAAGGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04216 -127 8.6 TTAAGCCCATGGTTGCCA-(15)-TGGCAACGTCCTGAAGGC
Salmonella typhimurium LT2 STM4050 -271 9.7 TTCTTTGCATTGTTGCCA-(14)-TGTCGTTATGATGAAGGT
-127 7.8 TTAACGTGCTGATTGCCA-(15)-CGGCAATCGTTATAAGGT
Yersinia pestis KIM y0593 -149 9.3 ACCTACTGAATTTTGCCA-(15)-AGGCAGTCAGCCGAAGGT